lightning/tests/models/test_restore.py

369 lines
11 KiB
Python
Raw Normal View History

import glob
import logging as log
import os
import pytest
import torch
import tests.base.utils as tutils
from pytorch_lightning import Trainer
from pytorch_lightning.callbacks import ModelCheckpoint
from pytorch_lightning.utilities.debugging import MisconfigurationException
from tests.base import (
LightningTestModel,
LightningTestModelWithoutHyperparametersArg,
LightningTestModelWithUnusedHyperparametersArg
)
def test_running_test_pretrained_model_ddp(tmpdir):
"""Verify `test()` on pretrained model."""
if not tutils.can_run_gpu_test():
return
tutils.reset_seed()
tutils.set_random_master_port()
hparams = tutils.get_default_hparams()
model = LightningTestModel(hparams)
# exp file to get meta
logger = tutils.get_default_testtube_logger(tmpdir, False)
# exp file to get weights
checkpoint = tutils.init_checkpoint_callback(logger)
trainer_options = dict(
show_progress_bar=False,
max_epochs=1,
train_percent_check=0.4,
val_percent_check=0.2,
checkpoint_callback=checkpoint,
logger=logger,
gpus=[0, 1],
distributed_backend='ddp'
)
# fit model
trainer = Trainer(**trainer_options)
result = trainer.fit(model)
log.info(os.listdir(tutils.get_data_path(logger, path_dir=tmpdir)))
# correct result and ok accuracy
assert result == 1, 'training failed to complete'
pretrained_model = tutils.load_model(logger,
trainer.checkpoint_callback.dirpath,
module_class=LightningTestModel)
# run test set
new_trainer = Trainer(**trainer_options)
new_trainer.test(pretrained_model)
Clean up dataloader logic (#926) * added get dataloaders directly using a getter * deleted decorator * added prepare_data hook * refactored dataloader init * refactored dataloader init * added dataloader reset flag and main loop * added dataloader reset flag and main loop * added dataloader reset flag and main loop * made changes * made changes * made changes * made changes * made changes * made changes * made changes * made changes * made changes * made changes * made changes * made changes * made changes * made changes * made changes * made changes * made changes * made changes * made changes * made changes * made changes * made changes * made changes * made changes * made changes * made changes * made changes * made changes * made changes * made changes * made changes * made changes * made changes * made changes * made changes * made changes * made changes * made changes * made changes * made changes * made changes * made changes * made changes * made changes * made changes * made changes * fixed bad loaders * fixed bad loaders * fixed bad loaders * fixed bad loaders * fixed bad loaders * fixed bad loaders * fixed bad loaders * fixed bad loaders * fixed bad loaders * fixed error in .fit with loaders * fixed error in .fit with loaders * fixed error in .fit with loaders * fixed error in .fit with loaders * fixed error in .fit with loaders * fixed error in .fit with loaders * fixed error in .fit with loaders * fixed error in .fit with loaders * fixed error in .fit with loaders * fixed error in .fit with loaders * fixed error in .fit with loaders * fixed error in .fit with loaders * fixed error in .fit with loaders * fixes #909 * fixes #909 * bug fix * Fixes #902
2020-02-25 03:23:25 +00:00
dataloaders = model.test_dataloader()
if not isinstance(dataloaders, list):
dataloaders = [dataloaders]
for dataloader in dataloaders:
tutils.run_prediction(dataloader, pretrained_model)
def test_running_test_pretrained_model(tmpdir):
Resolve some codefactor issues (#756) * remove unnecessary pass statements * use isinstance for type checks * remove unnecessary else/elif after return * remove unnecessary return statements * move doc string to top * merge isinstance calls * remove unnecessary else/elif after raise * use list comprehension * do not use len without comparison * add missing shebang * revert isinstance check back to type broke tests, because bool is actually subclass of int * add missing period to doc string * remove unnecessary pass statements * use isinstance for type checks * remove unnecessary else/elif after return * remove unnecessary return statements * move doc string to top * merge isinstance calls * remove unnecessary else/elif after raise * use list comprehension * do not use len without comparison * add missing shebang * revert isinstance check back to type broke tests, because bool is actually subclass of int * add missing period to doc string * Fix default ckpt path when logger exists (#771) * rename logging -> loggers (#767) * move logging >> loggers * add warning * fix tests * logging alias * formatting * formatting * use isinstance for type checks * revert isinstance check back to type broke tests, because bool is actually subclass of int * add more detail to tbptt example (#755) * add more detail to tbptt example * warn user about new arg in training_step Co-authored-by: Vadim Bereznyuk <kuynzereb@gmail.com> Co-authored-by: Jirka Borovec <Borda@users.noreply.github.com> Co-authored-by: Jeremy Jordan <13970565+jeremyjordan@users.noreply.github.com>
2020-02-01 23:44:05 +00:00
"""Verify test() on pretrained model."""
tutils.reset_seed()
hparams = tutils.get_default_hparams()
model = LightningTestModel(hparams)
# logger file to get meta
logger = tutils.get_default_testtube_logger(tmpdir, False)
# logger file to get weights
checkpoint = tutils.init_checkpoint_callback(logger)
trainer_options = dict(
show_progress_bar=False,
max_epochs=4,
train_percent_check=0.4,
val_percent_check=0.2,
checkpoint_callback=checkpoint,
logger=logger
)
# fit model
trainer = Trainer(**trainer_options)
result = trainer.fit(model)
# correct result and ok accuracy
assert result == 1, 'training failed to complete'
pretrained_model = tutils.load_model(
logger, trainer.checkpoint_callback.dirpath, module_class=LightningTestModel
)
new_trainer = Trainer(**trainer_options)
new_trainer.test(pretrained_model)
# test we have good test accuracy
2020-01-17 10:50:26 +00:00
tutils.assert_ok_model_acc(new_trainer)
def test_load_model_from_checkpoint(tmpdir):
Resolve some codefactor issues (#756) * remove unnecessary pass statements * use isinstance for type checks * remove unnecessary else/elif after return * remove unnecessary return statements * move doc string to top * merge isinstance calls * remove unnecessary else/elif after raise * use list comprehension * do not use len without comparison * add missing shebang * revert isinstance check back to type broke tests, because bool is actually subclass of int * add missing period to doc string * remove unnecessary pass statements * use isinstance for type checks * remove unnecessary else/elif after return * remove unnecessary return statements * move doc string to top * merge isinstance calls * remove unnecessary else/elif after raise * use list comprehension * do not use len without comparison * add missing shebang * revert isinstance check back to type broke tests, because bool is actually subclass of int * add missing period to doc string * Fix default ckpt path when logger exists (#771) * rename logging -> loggers (#767) * move logging >> loggers * add warning * fix tests * logging alias * formatting * formatting * use isinstance for type checks * revert isinstance check back to type broke tests, because bool is actually subclass of int * add more detail to tbptt example (#755) * add more detail to tbptt example * warn user about new arg in training_step Co-authored-by: Vadim Bereznyuk <kuynzereb@gmail.com> Co-authored-by: Jirka Borovec <Borda@users.noreply.github.com> Co-authored-by: Jeremy Jordan <13970565+jeremyjordan@users.noreply.github.com>
2020-02-01 23:44:05 +00:00
"""Verify test() on pretrained model."""
tutils.reset_seed()
hparams = tutils.get_default_hparams()
model = LightningTestModel(hparams)
trainer_options = dict(
show_progress_bar=False,
max_epochs=2,
train_percent_check=0.4,
val_percent_check=0.2,
checkpoint_callback=ModelCheckpoint(tmpdir, save_top_k=-1),
logger=False,
default_save_path=tmpdir,
)
# fit model
trainer = Trainer(**trainer_options)
result = trainer.fit(model)
trainer.test()
# correct result and ok accuracy
assert result == 1, 'training failed to complete'
# load last checkpoint
last_checkpoint = sorted(glob.glob(os.path.join(trainer.checkpoint_callback.dirpath, "*.ckpt")))[-1]
pretrained_model = LightningTestModel.load_from_checkpoint(last_checkpoint)
# test that hparams loaded correctly
for k, v in vars(hparams).items():
assert getattr(pretrained_model.hparams, k) == v
# assert weights are the same
for (old_name, old_p), (new_name, new_p) in zip(model.named_parameters(), pretrained_model.named_parameters()):
assert torch.all(torch.eq(old_p, new_p)), 'loaded weights are not the same as the saved weights'
new_trainer = Trainer(**trainer_options)
new_trainer.test(pretrained_model)
# test we have good test accuracy
2020-01-17 10:50:26 +00:00
tutils.assert_ok_model_acc(new_trainer)
def test_running_test_pretrained_model_dp(tmpdir):
Resolve some codefactor issues (#756) * remove unnecessary pass statements * use isinstance for type checks * remove unnecessary else/elif after return * remove unnecessary return statements * move doc string to top * merge isinstance calls * remove unnecessary else/elif after raise * use list comprehension * do not use len without comparison * add missing shebang * revert isinstance check back to type broke tests, because bool is actually subclass of int * add missing period to doc string * remove unnecessary pass statements * use isinstance for type checks * remove unnecessary else/elif after return * remove unnecessary return statements * move doc string to top * merge isinstance calls * remove unnecessary else/elif after raise * use list comprehension * do not use len without comparison * add missing shebang * revert isinstance check back to type broke tests, because bool is actually subclass of int * add missing period to doc string * Fix default ckpt path when logger exists (#771) * rename logging -> loggers (#767) * move logging >> loggers * add warning * fix tests * logging alias * formatting * formatting * use isinstance for type checks * revert isinstance check back to type broke tests, because bool is actually subclass of int * add more detail to tbptt example (#755) * add more detail to tbptt example * warn user about new arg in training_step Co-authored-by: Vadim Bereznyuk <kuynzereb@gmail.com> Co-authored-by: Jirka Borovec <Borda@users.noreply.github.com> Co-authored-by: Jeremy Jordan <13970565+jeremyjordan@users.noreply.github.com>
2020-02-01 23:44:05 +00:00
"""Verify test() on pretrained model."""
tutils.reset_seed()
if not tutils.can_run_gpu_test():
return
hparams = tutils.get_default_hparams()
model = LightningTestModel(hparams)
# logger file to get meta
logger = tutils.get_default_testtube_logger(tmpdir, False)
# logger file to get weights
checkpoint = tutils.init_checkpoint_callback(logger)
trainer_options = dict(
show_progress_bar=True,
max_epochs=4,
train_percent_check=0.4,
val_percent_check=0.2,
checkpoint_callback=checkpoint,
logger=logger,
gpus=[0, 1],
distributed_backend='dp'
)
# fit model
trainer = Trainer(**trainer_options)
result = trainer.fit(model)
# correct result and ok accuracy
assert result == 1, 'training failed to complete'
pretrained_model = tutils.load_model(logger,
trainer.checkpoint_callback.dirpath,
module_class=LightningTestModel)
new_trainer = Trainer(**trainer_options)
new_trainer.test(pretrained_model)
# test we have good test accuracy
2020-01-17 10:50:26 +00:00
tutils.assert_ok_model_acc(new_trainer)
def test_dp_resume(tmpdir):
"""Make sure DP continues training correctly."""
if not tutils.can_run_gpu_test():
return
tutils.reset_seed()
hparams = tutils.get_default_hparams()
model = LightningTestModel(hparams)
trainer_options = dict(
show_progress_bar=True,
max_epochs=3,
gpus=2,
distributed_backend='dp',
)
# get logger
logger = tutils.get_default_testtube_logger(tmpdir, debug=False)
# exp file to get weights
# logger file to get weights
checkpoint = tutils.init_checkpoint_callback(logger)
# add these to the trainer options
trainer_options['logger'] = logger
trainer_options['checkpoint_callback'] = checkpoint
# fit model
trainer = Trainer(**trainer_options)
trainer.is_slurm_managing_tasks = True
result = trainer.fit(model)
# track epoch before saving. Increment since we finished the current epoch, don't want to rerun
real_global_epoch = trainer.current_epoch + 1
# correct result and ok accuracy
assert result == 1, 'amp + dp model failed to complete'
# ---------------------------
# HPC LOAD/SAVE
# ---------------------------
# save
trainer.hpc_save(tmpdir, logger)
# init new trainer
new_logger = tutils.get_default_testtube_logger(tmpdir, version=logger.version)
trainer_options['logger'] = new_logger
trainer_options['checkpoint_callback'] = ModelCheckpoint(tmpdir)
trainer_options['train_percent_check'] = 0.5
trainer_options['val_percent_check'] = 0.2
trainer_options['max_epochs'] = 1
new_trainer = Trainer(**trainer_options)
# set the epoch start hook so we can predict before the model does the full training
def assert_good_acc():
assert new_trainer.current_epoch == real_global_epoch and new_trainer.current_epoch > 0
# if model and state loaded correctly, predictions will be good even though we
# haven't trained with the new loaded model
dp_model = new_trainer.model
dp_model.eval()
Clean up dataloader logic (#926) * added get dataloaders directly using a getter * deleted decorator * added prepare_data hook * refactored dataloader init * refactored dataloader init * added dataloader reset flag and main loop * added dataloader reset flag and main loop * added dataloader reset flag and main loop * made changes * made changes * made changes * made changes * made changes * made changes * made changes * made changes * made changes * made changes * made changes * made changes * made changes * made changes * made changes * made changes * made changes * made changes * made changes * made changes * made changes * made changes * made changes * made changes * made changes * made changes * made changes * made changes * made changes * made changes * made changes * made changes * made changes * made changes * made changes * made changes * made changes * made changes * made changes * made changes * made changes * made changes * made changes * made changes * made changes * made changes * fixed bad loaders * fixed bad loaders * fixed bad loaders * fixed bad loaders * fixed bad loaders * fixed bad loaders * fixed bad loaders * fixed bad loaders * fixed bad loaders * fixed error in .fit with loaders * fixed error in .fit with loaders * fixed error in .fit with loaders * fixed error in .fit with loaders * fixed error in .fit with loaders * fixed error in .fit with loaders * fixed error in .fit with loaders * fixed error in .fit with loaders * fixed error in .fit with loaders * fixed error in .fit with loaders * fixed error in .fit with loaders * fixed error in .fit with loaders * fixed error in .fit with loaders * fixes #909 * fixes #909 * bug fix * Fixes #902
2020-02-25 03:23:25 +00:00
dataloader = trainer.train_dataloader
tutils.run_prediction(dataloader, dp_model, dp=True)
# new model
model = LightningTestModel(hparams)
model.on_train_start = assert_good_acc
# fit new model which should load hpc weights
new_trainer.fit(model)
# test freeze on gpu
model.freeze()
model.unfreeze()
def test_model_saving_loading(tmpdir):
"""Tests use case where trainer saves the model, and user loads it from tags independently."""
tutils.reset_seed()
hparams = tutils.get_default_hparams()
model = LightningTestModel(hparams)
# logger file to get meta
logger = tutils.get_default_testtube_logger(tmpdir, False)
trainer_options = dict(
max_epochs=1,
logger=logger,
checkpoint_callback=ModelCheckpoint(tmpdir)
)
# fit model
trainer = Trainer(**trainer_options)
result = trainer.fit(model)
# traning complete
assert result == 1, 'amp + ddp model failed to complete'
# make a prediction
Clean up dataloader logic (#926) * added get dataloaders directly using a getter * deleted decorator * added prepare_data hook * refactored dataloader init * refactored dataloader init * added dataloader reset flag and main loop * added dataloader reset flag and main loop * added dataloader reset flag and main loop * made changes * made changes * made changes * made changes * made changes * made changes * made changes * made changes * made changes * made changes * made changes * made changes * made changes * made changes * made changes * made changes * made changes * made changes * made changes * made changes * made changes * made changes * made changes * made changes * made changes * made changes * made changes * made changes * made changes * made changes * made changes * made changes * made changes * made changes * made changes * made changes * made changes * made changes * made changes * made changes * made changes * made changes * made changes * made changes * made changes * made changes * fixed bad loaders * fixed bad loaders * fixed bad loaders * fixed bad loaders * fixed bad loaders * fixed bad loaders * fixed bad loaders * fixed bad loaders * fixed bad loaders * fixed error in .fit with loaders * fixed error in .fit with loaders * fixed error in .fit with loaders * fixed error in .fit with loaders * fixed error in .fit with loaders * fixed error in .fit with loaders * fixed error in .fit with loaders * fixed error in .fit with loaders * fixed error in .fit with loaders * fixed error in .fit with loaders * fixed error in .fit with loaders * fixed error in .fit with loaders * fixed error in .fit with loaders * fixes #909 * fixes #909 * bug fix * Fixes #902
2020-02-25 03:23:25 +00:00
dataloaders = model.test_dataloader()
if not isinstance(dataloaders, list):
dataloaders = [dataloaders]
for dataloader in dataloaders:
for batch in dataloader:
break
x, y = batch
x = x.view(x.size(0), -1)
# generate preds before saving model
model.eval()
pred_before_saving = model(x)
# save model
new_weights_path = os.path.join(tmpdir, 'save_test.ckpt')
trainer.save_checkpoint(new_weights_path)
# load new model
tags_path = tutils.get_data_path(logger, path_dir=tmpdir)
tags_path = os.path.join(tags_path, 'meta_tags.csv')
model_2 = LightningTestModel.load_from_checkpoint(
checkpoint_path=new_weights_path,
tags_csv=tags_path
)
model_2.eval()
# make prediction
# assert that both predictions are the same
new_pred = model_2(x)
assert torch.all(torch.eq(pred_before_saving, new_pred)).item() == 1
def test_load_model_with_missing_hparams(tmpdir):
trainer_options = dict(
show_progress_bar=False,
max_epochs=1,
checkpoint_callback=ModelCheckpoint(tmpdir, save_top_k=-1),
logger=False,
default_save_path=tmpdir,
)
# fit model
trainer = Trainer(**trainer_options)
model = LightningTestModelWithoutHyperparametersArg()
trainer.fit(model)
last_checkpoint = sorted(glob.glob(os.path.join(trainer.checkpoint_callback.dirpath, "*.ckpt")))[-1]
# try to load a checkpoint that has hparams but model is missing hparams arg
with pytest.raises(MisconfigurationException, match=r".*__init__ is missing the argument 'hparams'.*"):
LightningTestModelWithoutHyperparametersArg.load_from_checkpoint(last_checkpoint)
# create a checkpoint without hyperparameters
# if the model does not take a hparams argument, it should not throw an error
ckpt = torch.load(last_checkpoint)
del(ckpt['hparams'])
torch.save(ckpt, last_checkpoint)
LightningTestModelWithoutHyperparametersArg.load_from_checkpoint(last_checkpoint)
# load checkpoint without hparams again
# warn if user's model has hparams argument
with pytest.warns(UserWarning, match=r".*Will pass in an empty Namespace instead."):
LightningTestModelWithUnusedHyperparametersArg.load_from_checkpoint(last_checkpoint)
# if __name__ == '__main__':
# pytest.main([__file__])