mirror of https://github.com/explosion/spaCy.git
487 lines
25 KiB
Markdown
487 lines
25 KiB
Markdown
<a href="https://explosion.ai"><img src="https://explosion.ai/assets/img/logo.svg" width="125" height="125" align="right" /></a>
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# Contribute to spaCy
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Thanks for your interest in contributing to spaCy 🎉 The project is maintained
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by [@honnibal](https://github.com/honnibal) and [@ines](https://github.com/ines),
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and we'll do our best to help you get started. This page will give you a quick
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overview of how things are organised and most importantly, how to get involved.
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## Table of contents
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1. [Issues and bug reports](#issues-and-bug-reports)
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2. [Contributing to the code base](#contributing-to-the-code-base)
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3. [Code conventions](#code-conventions)
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4. [Adding tests](#adding-tests)
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5. [Updating the website](#updating-the-website)
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6. [Publishing extensions and plugins](#publishing-spacy-extensions-and-plugins)
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7. [Code of conduct](#code-of-conduct)
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## Issues and bug reports
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First, [do a quick search](https://github.com/issues?q=+is%3Aissue+user%3Aexplosion)
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to see if the issue has already been reported. If so, it's often better to just
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leave a comment on an existing issue, rather than creating a new one. Old issues
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also often include helpful tips and solutions to common problems. You should
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also check the [troubleshooting guide](https://spacy.io/usage/#troubleshooting)
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to see if your problem is already listed there.
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If you're looking for help with your code, consider posting a question on
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[Stack Overflow](http://stackoverflow.com/questions/tagged/spacy) instead. If you
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tag it `spacy` and `python`, more people will see it and hopefully be able to
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help. Please understand that we won't be able to provide individual support via
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email. We also believe that help is much more valuable if it's **shared publicly**,
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so that more people can benefit from it.
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### Submitting issues
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When opening an issue, use a **descriptive title** and include your
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**environment** (operating system, Python version, spaCy version). Our
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[issue template](https://github.com/explosion/spaCy/issues/new) helps you
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remember the most important details to include. If you've discovered a bug, you
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can also submit a [regression test](#fixing-bugs) straight away. When you're
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opening an issue to report the bug, simply refer to your pull request in the
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issue body. A few more tips:
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- **Describing your issue:** Try to provide as many details as possible. What
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exactly goes wrong? _How_ is it failing? Is there an error?
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"XY doesn't work" usually isn't that helpful for tracking down problems. Always
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remember to include the code you ran and if possible, extract only the relevant
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parts and don't just dump your entire script. This will make it easier for us to
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reproduce the error.
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- **Getting info about your spaCy installation and environment:** If you're
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using spaCy v1.7+, you can use the command line interface to print details and
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even format them as Markdown to copy-paste into GitHub issues:
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`python -m spacy info --markdown`.
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- **Checking the model compatibility:** If you're having problems with a
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[statistical model](https://spacy.io/models), it may be because the
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model is incompatible with your spaCy installation. In spaCy v2.0+, you can check
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this on the command line by running `python -m spacy validate`.
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- **Sharing a model's output, like dependencies and entities:** spaCy v2.0+
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comes with [built-in visualizers](https://spacy.io/usage/visualizers) that
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you can run from within your script or a Jupyter notebook. For some issues, it's
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helpful to **include a screenshot** of the visualization. You can simply drag and
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drop the image into GitHub's editor and it will be uploaded and included.
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- **Sharing long blocks of code or logs:** If you need to include long code,
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logs or tracebacks, you can wrap them in `<details>` and `</details>`. This
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[collapses the content](https://developer.mozilla.org/en/docs/Web/HTML/Element/details)
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so it only becomes visible on click, making the issue easier to read and follow.
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### Issue labels
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To distinguish issues that are opened by us, the maintainers, we usually add a
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💫 to the title. [See this page](https://github.com/explosion/spaCy/labels)
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for an overview of the system we use to tag our issues and pull requests.
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## Contributing to the code base
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You don't have to be an NLP expert or Python pro to contribute, and we're happy
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to help you get started. If you're new to spaCy, a good place to start is the
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[spaCy 101 guide](https://spacy.io/usage/spacy-101) and the
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[`help wanted (easy)`](https://github.com/explosion/spaCy/issues?q=is%3Aissue+is%3Aopen+label%3A%22help+wanted+%28easy%29%22)
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label, which we use to tag bugs and feature requests that are easy and
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self-contained. If you've decided to take on one of these problems and you're
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making good progress, don't forget to add a quick comment to the issue. You can
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also use the issue to ask questions, or share your work in progress.
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### What belongs in spaCy?
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Every library has a different inclusion philosophy — a policy of what should be
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shipped in the core library, and what could be provided in other packages. Our
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philosophy is to prefer a smaller core library. We generally ask the following
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questions:
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- **What would this feature look like if implemented in a separate package?**
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Some features would be very difficult to implement externally – for example,
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changes to spaCy's built-in methods. In contrast, a library of word
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alignment functions could easily live as a separate package that depended on
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spaCy — there's little difference between writing `import word_aligner` and
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`import spacy.word_aligner`. spaCy v2.0+ makes it easy to implement
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[custom pipeline components](https://spacy.io/usage/processing-pipelines#custom-components),
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and add your own attributes, properties and methods to the `Doc`, `Token` and
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`Span`. If you're looking to implement a new spaCy feature, starting with a
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custom component package is usually the best strategy. You won't have to worry
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about spaCy's internals and you can test your module in an isolated
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environment. And if it works well, we can always integrate it into the core
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library later.
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- **Would the feature be easier to implement if it relied on "heavy" dependencies spaCy doesn't currently require?**
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Python has a very rich ecosystem. Libraries like scikit-learn, SciPy, Gensim or
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TensorFlow/Keras do lots of useful things — but we don't want to have them as
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dependencies. If the feature requires functionality in one of these libraries,
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it's probably better to break it out into a different package.
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- **Is the feature orthogonal to the current spaCy functionality, or overlapping?**
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spaCy strongly prefers to avoid having 6 different ways of doing the same thing.
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As better techniques are developed, we prefer to drop support for "the old way".
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However, it's rare that one approach _entirely_ dominates another. It's very
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common that there's still a use-case for the "obsolete" approach. For instance,
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[WordNet](https://wordnet.princeton.edu/) is still very useful — but word
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vectors are better for most use-cases, and the two approaches to lexical
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semantics do a lot of the same things. spaCy therefore only supports word
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vectors, and support for WordNet is currently left for other packages.
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- **Do you need the feature to get basic things done?** We do want spaCy to be
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at least somewhat self-contained. If we keep needing some feature in our
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recipes, that does provide some argument for bringing it "in house".
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### Getting started
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To make changes to spaCy's code base, you need to fork then clone the GitHub repository
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and build spaCy from source. You'll need to make sure that you have a
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development environment consisting of a Python distribution including header
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files, a compiler, [pip](https://pip.pypa.io/en/latest/installing/),
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[virtualenv](https://virtualenv.pypa.io/en/stable/) and
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[git](https://git-scm.com) installed. The compiler is usually the trickiest part.
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```
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python -m pip install -U pip
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git clone https://github.com/explosion/spaCy
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cd spaCy
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python -m venv .env
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source .env/bin/activate
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export PYTHONPATH=`pwd`
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pip install -r requirements.txt
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python setup.py build_ext --inplace
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```
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If you've made changes to `.pyx` files, you need to recompile spaCy before you
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can test your changes by re-running `python setup.py build_ext --inplace`.
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Changes to `.py` files will be effective immediately.
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📖 **For more details and instructions, see the documentation on [compiling spaCy from source](https://spacy.io/usage/#source) and the [quickstart widget](https://spacy.io/usage/#section-quickstart) to get the right commands for your platform and Python version.**
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### Contributor agreement
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If you've made a contribution to spaCy, you should fill in the
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[spaCy contributor agreement](.github/CONTRIBUTOR_AGREEMENT.md) to ensure that
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your contribution can be used across the project. If you agree to be bound by
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the terms of the agreement, fill in the [template](.github/CONTRIBUTOR_AGREEMENT.md)
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and include it with your pull request, or submit it separately to
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[`.github/contributors/`](/.github/contributors). The name of the file should be
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your GitHub username, with the extension `.md`. For example, the user
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example_user would create the file `.github/contributors/example_user.md`.
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### Fixing bugs
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When fixing a bug, first create an
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[issue](https://github.com/explosion/spaCy/issues) if one does not already exist.
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The description text can be very short – we don't want to make this too
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bureaucratic.
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Next, create a test file named `test_issue[ISSUE NUMBER].py` in the
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[`spacy/tests/regression`](spacy/tests/regression) folder. Test for the bug
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you're fixing, and make sure the test fails. Next, add and commit your test file
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referencing the issue number in the commit message. Finally, fix the bug, make
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sure your test passes and reference the issue in your commit message.
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📖 **For more information on how to add tests, check out the [tests README](spacy/tests/README.md).**
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## Code conventions
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Code should loosely follow [pep8](https://www.python.org/dev/peps/pep-0008/).
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As of `v2.1.0`, spaCy uses [`black`](https://github.com/ambv/black) for code
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formatting and [`flake8`](http://flake8.pycqa.org/en/latest/) for linting its
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Python modules. If you've built spaCy from source, you'll already have both
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tools installed.
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**⚠️ Note that formatting and linting is currently only possible for Python
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modules in `.py` files, not Cython modules in `.pyx` and `.pxd` files.**
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### Code formatting
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[`black`](https://github.com/ambv/black) is an opinionated Python code
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formatter, optimised to produce readable code and small diffs. You can run
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`black` from the command-line, or via your code editor. For example, if you're
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using [Visual Studio Code](https://code.visualstudio.com/), you can add the
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following to your `settings.json` to use `black` for formatting and auto-format
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your files on save:
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```json
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{
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"python.formatting.provider": "black",
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"[python]": {
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"editor.formatOnSave": true
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}
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}
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```
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[See here](https://github.com/ambv/black#editor-integration) for the full
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list of available editor integrations.
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#### Disabling formatting
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There are a few cases where auto-formatting doesn't improve readability – for
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example, in some of the the language data files like the `tag_map.py`, or in
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the tests that construct `Doc` objects from lists of words and other labels.
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Wrapping a block in `# fmt: off` and `# fmt: on` lets you disable formatting
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for that particular code. Here's an example:
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```python
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# fmt: off
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text = "I look forward to using Thingamajig. I've been told it will make my life easier..."
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heads = [1, 0, -1, -2, -1, -1, -5, -1, 3, 2, 1, 0, 2, 1, -3, 1, 1, -3, -7]
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deps = ["nsubj", "ROOT", "advmod", "prep", "pcomp", "dobj", "punct", "",
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"nsubjpass", "aux", "auxpass", "ROOT", "nsubj", "aux", "ccomp",
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"poss", "nsubj", "ccomp", "punct"]
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# fmt: on
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```
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### Code linting
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[`flake8`](http://flake8.pycqa.org/en/latest/) is a tool for enforcing code
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style. It scans one or more files and outputs errors and warnings. This feedback
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can help you stick to general standards and conventions, and can be very useful
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for spotting potential mistakes and inconsistencies in your code. The most
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important things to watch out for are syntax errors and undefined names, but you
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also want to keep an eye on unused declared variables or repeated
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(i.e. overwritten) dictionary keys. If your code was formatted with `black`
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(see above), you shouldn't see any formatting-related warnings.
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The [`.flake8`](.flake8) config defines the configuration we use for this
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codebase. For example, we're not super strict about the line length, and we're
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excluding very large files like lemmatization and tokenizer exception tables.
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Ideally, running the following command from within the repo directory should
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not return any errors or warnings:
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```bash
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flake8 spacy
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```
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#### Disabling linting
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Sometimes, you explicitly want to write code that's not compatible with our
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rules. For example, a module's `__init__.py` might import a function so other
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modules can import it from there, but `flake8` will complain about an unused
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import. And although it's generally discouraged, there might be cases where it
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makes sense to use a bare `except`.
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To ignore a given line, you can add a comment like `# noqa: F401`, specifying
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the code of the error or warning we want to ignore. It's also possible to
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ignore several comma-separated codes at once, e.g. `# noqa: E731,E123`. Here
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are some examples:
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```python
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# The imported class isn't used in this file, but imported here, so it can be
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# imported *from* here by another module.
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from .submodule import SomeClass # noqa: F401
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try:
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do_something()
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except: # noqa: E722
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# This bare except is justified, for some specific reason
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do_something_else()
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```
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### Python conventions
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All Python code must be written in an **intersection of Python 2 and Python 3**.
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This is easy in Cython, but somewhat ugly in Python. Logic that deals with
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Python or platform compatibility should only live in
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[`spacy.compat`](spacy/compat.py). To distinguish them from the builtin
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functions, replacement functions are suffixed with an underscore, for example
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`unicode_`. If you need to access the user's version or platform information,
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for example to show more specific error messages, you can use the `is_config()`
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helper function.
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```python
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from .compat import unicode_, is_config
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compatible_unicode = unicode_('hello world')
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if is_config(windows=True, python2=True):
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print("You are using Python 2 on Windows.")
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```
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Code that interacts with the file-system should accept objects that follow the
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`pathlib.Path` API, without assuming that the object inherits from `pathlib.Path`.
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If the function is user-facing and takes a path as an argument, it should check
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whether the path is provided as a string. Strings should be converted to
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`pathlib.Path` objects. Serialization and deserialization functions should always
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accept **file-like objects**, as it makes the library io-agnostic. Working on
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buffers makes the code more general, easier to test, and compatible with Python
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3's asynchronous IO.
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Although spaCy uses a lot of classes, **inheritance is viewed with some suspicion**
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— it's seen as a mechanism of last resort. You should discuss plans to extend
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the class hierarchy before implementing.
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We have a number of conventions around variable naming that are still being
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documented, and aren't 100% strict. A general policy is that instances of the
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class `Doc` should by default be called `doc`, `Token` `token`, `Lexeme` `lex`,
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`Vocab` `vocab` and `Language` `nlp`. You should avoid naming variables that are
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of other types these names. For instance, don't name a text string `doc` — you
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should usually call this `text`. Two general code style preferences further help
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with naming. First, **lean away from introducing temporary variables**, as these
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clutter your namespace. This is one reason why comprehension expressions are
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often preferred. Second, **keep your functions shortish**, so they can work in a
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smaller scope. Of course, this is a question of trade-offs.
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### Cython conventions
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spaCy's core data structures are implemented as [Cython](http://cython.org/) `cdef`
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classes. Memory is managed through the `cymem.cymem.Pool` class, which allows
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you to allocate memory which will be freed when the `Pool` object is garbage
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collected. This means you usually don't have to worry about freeing memory. You
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just have to decide which Python object owns the memory, and make it own the
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`Pool`. When that object goes out of scope, the memory will be freed. You do
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have to take care that no pointers outlive the object that owns them — but this
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is generally quite easy.
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All Cython modules should have the `# cython: infer_types=True` compiler
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directive at the top of the file. This makes the code much cleaner, as it avoids
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the need for many type declarations. If possible, you should prefer to declare
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your functions `nogil`, even if you don't especially care about multi-threading.
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The reason is that `nogil` functions help the Cython compiler reason about your
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code quite a lot — you're telling the compiler that no Python dynamics are
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possible. This lets many errors be raised, and ensures your function will run
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at C speed.
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Cython gives you many choices of sequences: you could have a Python list, a
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numpy array, a memory view, a C++ vector, or a pointer. Pointers are preferred,
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because they are fastest, have the most explicit semantics, and let the compiler
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check your code more strictly. C++ vectors are also great — but you should only
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use them internally in functions. It's less friendly to accept a vector as an
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argument, because that asks the user to do much more work.
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Here's how to get a pointer from a numpy array, memory view or vector:
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```cython
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cdef void get_pointers(np.ndarray[int, mode='c'] numpy_array, vector[int] cpp_vector, int[::1] memory_view) nogil:
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pointer1 = <int*>numpy_array.data
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pointer2 = cpp_vector.data()
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pointer3 = &memory_view[0]
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```
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Both C arrays and C++ vectors reassure the compiler that no Python operations
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are possible on your variable. This is a big advantage: it lets the Cython
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compiler raise many more errors for you.
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When getting a pointer from a numpy array or memoryview, take care that the data
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is actually stored in C-contiguous order — otherwise you'll get a pointer to
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nonsense. The type-declarations in the code above should generate runtime errors
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if buffers with incorrect memory layouts are passed in.
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To iterate over the array, the following style is preferred:
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```cython
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cdef int c_total(const int* int_array, int length) nogil:
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total = 0
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for item in int_array[:length]:
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total += item
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return total
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```
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If this is confusing, consider that the compiler couldn't deal with
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`for item in int_array:` — there's no length attached to a raw pointer, so how
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could we figure out where to stop? The length is provided in the slice notation
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as a solution to this. Note that we don't have to declare the type of `item` in
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the code above — the compiler can easily infer it. This gives us tidy code that
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looks quite like Python, but is exactly as fast as C — because we've made sure
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the compilation to C is trivial.
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Your functions cannot be declared `nogil` if they need to create Python objects
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or call Python functions. This is perfectly okay — you shouldn't torture your
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code just to get `nogil` functions. However, if your function isn't `nogil`, you
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should compile your module with `cython -a --cplus my_module.pyx` and open the
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resulting `my_module.html` file in a browser. This will let you see how Cython
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is compiling your code. Calls into the Python run-time will be in bright yellow.
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This lets you easily see whether Cython is able to correctly type your code, or
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whether there are unexpected problems.
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Finally, if you're new to Cython, you should expect to find the first steps a
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bit frustrating. It's a very large language, since it's essentially a superset
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of Python and C++, with additional complexity and syntax from numpy. The
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[documentation](http://docs.cython.org/en/latest/) isn't great, and there are
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many "traps for new players". Working in Cython is very rewarding once you're
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over the initial learning curve. As with C and C++, the first way you write
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something in Cython will often be the performance-optimal approach. In contrast,
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Python optimisation generally requires a lot of experimentation. Is it faster to
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have an `if item in my_dict` check, or to use `.get()`? What about `try`/`except`?
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Does this numpy operation create a copy? There's no way to guess the answers to
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these questions, and you'll usually be dissatisfied with your results — so
|
||
there's no way to know when to stop this process. In the worst case, you'll make
|
||
a mess that invites the next reader to try their luck too. This is like one of
|
||
those [volcanic gas-traps](http://www.wemjournal.org/article/S1080-6032%2809%2970088-2/abstract),
|
||
where the rescuers keep passing out from low oxygen, causing another rescuer to
|
||
follow — only to succumb themselves. In short, just say no to optimizing your
|
||
Python. If it's not fast enough the first time, just switch to Cython.
|
||
|
||
### Resources to get you started
|
||
|
||
- [PEP 8 Style Guide for Python Code](https://www.python.org/dev/peps/pep-0008/) (python.org)
|
||
- [Official Cython documentation](http://docs.cython.org/en/latest/) (cython.org)
|
||
- [Writing C in Cython](https://explosion.ai/blog/writing-c-in-cython) (explosion.ai)
|
||
- [Multi-threading spaCy’s parser and named entity recogniser](https://explosion.ai/blog/multithreading-with-cython) (explosion.ai)
|
||
|
||
## Adding tests
|
||
|
||
spaCy uses the [pytest](http://doc.pytest.org/) framework for testing. For more
|
||
info on this, see the [pytest documentation](http://docs.pytest.org/en/latest/contents.html).
|
||
Tests for spaCy modules and classes live in their own directories of the same
|
||
name. For example, tests for the `Tokenizer` can be found in
|
||
[`/spacy/tests/tokenizer`](spacy/tests/tokenizer). To be interpreted and run,
|
||
all test files and test functions need to be prefixed with `test_`.
|
||
|
||
When adding tests, make sure to use descriptive names, keep the code short and
|
||
concise and only test for one behaviour at a time. Try to `parametrize` test
|
||
cases wherever possible, use our pre-defined fixtures for spaCy components and
|
||
avoid unnecessary imports.
|
||
|
||
Extensive tests that take a long time should be marked with `@pytest.mark.slow`.
|
||
Tests that require the model to be loaded should be marked with
|
||
`@pytest.mark.models`. Loading the models is expensive and not necessary if
|
||
you're not actually testing the model performance. If all you need is a `Doc`
|
||
object with annotations like heads, POS tags or the dependency parse, you can
|
||
use the `get_doc()` utility function to construct it manually.
|
||
|
||
📖 **For more guidelines and information on how to add tests, check out the [tests README](spacy/tests/README.md).**
|
||
|
||
## Updating the website
|
||
|
||
For instructions on how to build and run the [website](https://spacy.io) locally see **[Setup and installation](https://github.com/explosion/spaCy/blob/master/website/README.md#setup-and-installation-setup)** in the _website_ directory's README.
|
||
|
||
The docs can always use another example or more detail, and they should always
|
||
be up to date and not misleading. To quickly find the correct file to edit,
|
||
simply click on the "Suggest edits" button at the bottom of a page.
|
||
|
||
📖 **For more info and troubleshooting guides, check out the [website README](website).**
|
||
|
||
## Publishing spaCy extensions and plugins
|
||
|
||
We're very excited about all the new possibilities for **community extensions**
|
||
and plugins in spaCy v2.0, and we can't wait to see what you build with it!
|
||
|
||
- An extension or plugin should add substantial functionality, be
|
||
**well-documented** and **open-source**. It should be available for users to download
|
||
and install as a Python package – for example via [PyPi](http://pypi.python.org).
|
||
|
||
- Extensions that write to `Doc`, `Token` or `Span` attributes should be wrapped
|
||
as [pipeline components](https://spacy.io/usage/processing-pipelines#custom-components)
|
||
that users can **add to their processing pipeline** using `nlp.add_pipe()`.
|
||
|
||
- When publishing your extension on GitHub, **tag it** with the topics
|
||
[`spacy`](https://github.com/topics/spacy?o=desc&s=stars) and
|
||
[`spacy-extensions`](https://github.com/topics/spacy-extension?o=desc&s=stars)
|
||
to make it easier to find. Those are also the topics we're linking to from the
|
||
spaCy website. If you're sharing your project on Twitter, feel free to tag
|
||
[@spacy_io](https://twitter.com/spacy_io) so we can check it out.
|
||
|
||
- Once your extension is published, you can open an issue on the
|
||
[issue tracker](https://github.com/explosion/spacy/issues) to suggest it for the
|
||
[resources directory](https://spacy.io/usage/resources#extensions) on the
|
||
website.
|
||
|
||
📖 **For more tips and best practices, see the [checklist for developing spaCy extensions](https://spacy.io/usage/processing-pipelines#extensions).**
|
||
|
||
## Code of conduct
|
||
|
||
spaCy adheres to the
|
||
[Contributor Covenant Code of Conduct](http://contributor-covenant.org/version/1/4/).
|
||
By participating, you are expected to uphold this code.
|