Commit Graph

15751 Commits

Author SHA1 Message Date
github-actions[bot] 90896504a5
Auto-format code with black (#12019)
Co-authored-by: explosion-bot <explosion-bot@users.noreply.github.com>
2022-12-23 12:44:07 +01:00
Adriane Boyd 64d2d27c5d
Add classifier for python 3.11 (#12013) 2022-12-22 10:53:16 +01:00
Raphael Mitsch eef3d950b4
Fix `SpanGroup` and `Span` typing (#12009)
* Correct Span.label, Span.kb_id types. Fix SpanGroup.__iter__().

* Extend test.

* Rename test. Fix typo.

* Add comment.

* Fix types for Span.label, Span.kb_id, Span.char_span().

* Update spacy/tests/doc/test_span_group.py

Co-authored-by: Adriane Boyd <adrianeboyd@gmail.com>

* Update docs.

* Fix typo.

* Update spacy/tokens/span_group.pyx

Co-authored-by: Adriane Boyd <adrianeboyd@gmail.com>

Co-authored-by: Adriane Boyd <adrianeboyd@gmail.com>
2022-12-21 18:54:27 +01:00
kadarakos c223cd7a86
Add apply CLI (#11376)
* annotate cli first try

* add batch-size and n_process

* rename to apply

* typing fix

* handle file suffixes

* walk directories

* support jsonl

* typing fix

* remove debug

* make suffix optional for walk

* revert unrelated

* don't warn but raise

* better error message

* minor touch up

* Update spacy/tests/test_cli.py

Co-authored-by: Adriane Boyd <adrianeboyd@gmail.com>

* Update spacy/cli/apply.py

Co-authored-by: Sofie Van Landeghem <svlandeg@users.noreply.github.com>

* Update spacy/cli/apply.py

Co-authored-by: Sofie Van Landeghem <svlandeg@users.noreply.github.com>

* update tests and bugfix

* add force_overwrite

* typo

* fix adding .spacy suffix

* Update spacy/cli/apply.py

Co-authored-by: Sofie Van Landeghem <svlandeg@users.noreply.github.com>

* Update spacy/cli/apply.py

Co-authored-by: Sofie Van Landeghem <svlandeg@users.noreply.github.com>

* Update spacy/cli/apply.py

Co-authored-by: Sofie Van Landeghem <svlandeg@users.noreply.github.com>

* store user data and rename cmd arg

* include test for user attr

* rename cmd arg

* better help message

* documentation

* prettier

* black

* link fix

* Update spacy/cli/apply.py

Co-authored-by: Paul O'Leary McCann <polm@dampfkraft.com>

* Update website/docs/api/cli.md

Co-authored-by: Paul O'Leary McCann <polm@dampfkraft.com>

* Update website/docs/api/cli.md

Co-authored-by: Paul O'Leary McCann <polm@dampfkraft.com>

* Update website/docs/api/cli.md

Co-authored-by: Paul O'Leary McCann <polm@dampfkraft.com>

* addressing reviews

* dont quit but warn

* prettier

Co-authored-by: Adriane Boyd <adrianeboyd@gmail.com>
Co-authored-by: Sofie Van Landeghem <svlandeg@users.noreply.github.com>
Co-authored-by: Paul O'Leary McCann <polm@dampfkraft.com>
2022-12-20 17:11:33 +01:00
Jos Polfliet 18ffe5bbd6
Update stop_words.py (#11997)
fix typo in "aangaande"
2022-12-19 16:17:49 +01:00
cfuerbachersparks 3a2b655a29
Update lexeme.md (#11994)
Change suffix_ string to end
2022-12-19 10:33:38 +01:00
Adriane Boyd c9d9d6847f
Update build constraints for python 3.11 (#11981) 2022-12-15 10:55:01 +01:00
Adriane Boyd e5c7f3b077
CI: Install thinc-apple-ops through extra (#11963) 2022-12-12 10:13:10 +01:00
Adriane Boyd 0591e67265
Cast to uint64 for all array-based doc representations (#11933)
* Convert all individual values explicitly to uint64 for array-based doc representations

* Temporarily test with latest numpy v1.24.0rc

* Remove unnecessary conversion from attr_t

* Reduce number of individual casts

* Convert specifically from int32 to uint64

* Revert "Temporarily test with latest numpy v1.24.0rc"

This reverts commit eb0e3c5006.

* Also use int32 in tests
2022-12-12 08:45:35 +01:00
Adriane Boyd 8c291ace0c
Extend to wasabi v1.1 (#11945)
* Extend to wasabi v1.1

* Temporarily run mypy and tests with newest wasabi

* Temporarily skip check requirements test

* Revert "Temporarily skip check requirements test"

This reverts commit 44f4ce20a8.

* Revert "Temporarily run mypy and tests with newest wasabi"

This reverts commit e677a2257c.
2022-12-12 08:38:36 +01:00
github-actions[bot] f22fc7a113
Auto-format code with black (#11955)
Co-authored-by: explosion-bot <explosion-bot@users.noreply.github.com>
2022-12-09 10:15:52 +01:00
vincent d warmerdam 6d2ca1ab3a
Update custom solutions links (#11903)
* Update custom solutions

Will now point to https://explosion.ai/custom-solutions

* added-sidebar

* added-analysis-to-readme

* update-landing-page
2022-12-07 16:02:09 +01:00
Paul O'Leary McCann 73919336fb
Remove spacy-sentence-segmenter from Universe (#11932) 2022-12-07 15:56:03 +01:00
Paul O'Leary McCann 5c3a60e8f4
Add in errors used in the beam code that were removed at some point (#11935)
I don't think there's any way to use the beam code at the moment, but as
long as it's around the errors it refers to should also be present.
2022-12-07 15:52:35 +01:00
Paul O'Leary McCann 916191848a
Update scattertext example code (#11937)
* Update scattertext example code

* Remove PMI Filter Threshold
2022-12-07 18:09:04 +09:00
Daniël de Kok 27fac7df2e
EditTreeLemmatizer: correctly add strings when initializing from labels (#11934)
Strings in replacement nodes where not added to the `StringStore`
when `EditTreeLemmatizer` was initialized from a set of labels. The
corresponding test did not capture this because it added the strings
through the examples that were passed to the initialization.

This change fixes both this bug in the initialization as the 'shadowing'
of the bug in the test.
2022-12-07 13:53:41 +09:00
Zhangrp 23085ffef4
Fix interpolation in directory names, see #11235. (#11914) 2022-12-06 17:42:12 +09:00
Ryn Daniels 1aadcfcb37
update lock-threads to v4 (#11930) 2022-12-05 10:17:10 +01:00
Adriane Boyd 8afa8b5a7b
Refactor kwargs in CLI msg for future wasabi compatibility (#11918)
Necessary for mypy with wasabi v1+.
2022-12-05 10:00:00 +01:00
Darigov Research 6f342bdd72
docs: Adds link to license in readme (#11924)
Would resolve https://github.com/explosion/spaCy/issues/11923 if merged
2022-12-05 09:49:04 +01:00
Paul O'Leary McCann 5848656b5e
Switch ubuntu-latest to ubuntu-20.04 in main tests (#11928)
* Switch ubuntu-latest to ubuntu-20.04 in main tests

* Only use 20.04 for 3.6
2022-12-05 09:43:23 +01:00
Sofie Van Landeghem 4b2097a271
fix links (#11927) 2022-12-05 16:29:13 +09:00
github-actions[bot] df0cb4b77b
Auto-format code with black (#11913)
Co-authored-by: explosion-bot <explosion-bot@users.noreply.github.com>
2022-12-02 14:49:12 +01:00
Paul O'Leary McCann f9d17a644b
Config generation fails for GPU without transformers (#11899)
If you don't have spacy-transformers installed, but try to use `init
config` with the GPU flag, you'll get an error. The issue is that the
`use_transformers` flag in the config is conflated with the GPU flag,
and then there's an attempt to access transformers config info that may
not exist.

There may be a better way to do this, but this stops the error.
2022-12-02 10:17:11 +01:00
Adriane Boyd 445c670a2d
Fix spancat for zero suggestions (#11860)
* Add test for spancat predict with zero suggestions

* Fix spancat for zero suggestions

* Undo changes to extract_spans

* Use .sum() as in update
2022-12-02 09:33:52 +01:00
Zhangrp 9cf3fa9711
Add docs for biluo_to_iob and iob_to_biluo. (#11901)
* Add docs for biluo_to_iob and iob_to_biluo.

* Fix typos.

* Remove redundant links.
2022-12-01 13:30:27 +01:00
Damian Romero afd7a2476d
Fix typo in vocab.md table (#11908)
* Fix typo in vocab.md table

Fixes explosion/spaCy/#11907

* Reformat vocab.md with Prettier
2022-12-01 13:06:28 +01:00
Adriane Boyd 6f9d630f7e
Replace Pipe type with Callable in Language (#11803)
* Replace Pipe type with Callable in Language

* Use Callable[[Doc], Doc] in the docstrings
2022-11-29 13:20:08 +01:00
Paul O'Leary McCann f1e0243450
Remove macro auc per type from textcat defaults (#11887)
This appears to have been added by mistake and never used. Removing it
does not break validation.
2022-11-29 11:50:23 +01:00
Adriane Boyd e0d43557b7
Merge pull request #11871 from adrianeboyd/chore/v3.5.0
Prepare for v3.5.0
2022-11-29 11:41:32 +01:00
Adriane Boyd 1ebe7db07c
Support local filesystem remotes for projects (#11762)
* Support local filesystem remotes for projects

* Fix support for local filesystem remotes for projects
  * Use `FluidPath` instead of `Pathy` to support both filesystem and
    remote paths
  * Create missing parent directories if required for local filesystem
  * Add a more general `_file_exists` method to support both `Pathy`,
    `Path`, and `smart_open`-compatible URLs
* Add explicit `smart_open` dependency starting with support for
  `compression` flag
* Update `pathy` dependency to exclude older versions that aren't
  compatible with required `smart_open` version
* Update docs to refer to `Pathy` instead of `smart_open` for project
  remotes (technically you can still push to any `smart_open`-compatible
  path but you can't pull from them)
* Add tests for local filesystem remotes

* Update pathy for general BlobStat sorting

* Add import

* Remove _file_exists since only Pathy remotes are supported

* Format CLI docs

* Clean up merge
2022-11-29 11:40:58 +01:00
Sofie Van Landeghem 96c9cf3448
Merge pull request #11855 from essenmitsosse/move-styleguide-out-of-readme
Move Styleguide out of Readme
2022-11-28 21:22:56 +01:00
Paul O'Leary McCann f54bfb56c9
Don't throw an error if using displacy on an unset span key (#11845)
* Don't throw an error if using displacy on an unset span key

* List available keys in W117
2022-11-28 10:01:09 +01:00
Zhangrp 9f986af120
Add example sentence for Chinese in website meta (#11879) 2022-11-28 14:50:30 +09:00
Marcus Blättermann 5c9faf6eea
Update menu for styleguide
This reflects the removed parts from ecbf052abd
2022-11-27 03:48:05 +01:00
Marcus Blättermann 90141202c0
Merge branch 'move-styleguide-out-of-readme' into migrate-to-next-web-17 2022-11-27 03:48:03 +01:00
Marcus Blättermann 7f2ea20fee
Update `README.md` 2022-11-27 03:47:11 +01:00
Marcus Blättermann c23d54fd26
Remove MDX tags from `README.md` 2022-11-27 03:47:11 +01:00
Adriane Boyd 681ec20914
Add smart_open requirement, update deprecated options (#11864)
* Switch from deprecated `ignore_ext` to `compression`
* Add upload/download test for local files
2022-11-25 13:00:57 +01:00
Adriane Boyd 32396e0bda Set version to v3.5.0 2022-11-25 12:05:25 +01:00
Adriane Boyd 378db0eb1e Temporarily skip tests that require models/compat 2022-11-25 12:05:25 +01:00
Raphael Mitsch c0fd8a2e71
find-threshold: CLI command for multi-label classifier threshold tuning (#11280)
* Add foundation for find-threshold CLI functionality.

* Finish first draft for find-threshold.

* Add tests.

* Revert adjusted import statements.

* Fix mypy errors.

* Fix imports.

* Harmonize arguments with spacy evaluate command.

* Generalize component and threshold handling. Harmonize arguments with 'spacy evaluate' CLI.

* Fix Spancat test.

* Add beta parameter to Scorer and PRFScore.

* Make beta a component scorer setting.

* Remove beta.

* Update nlp.config (workaround).

* Reload pipeline on threshold change. Adjust tests. Remove confection reference.

* Remove assumption of component being a Pipe object or having a .cfg attribute.

* Adjust test output and reference values.

* Remove beta references. Delete universe.json.

* Reverting unnecessary changes. Removing unused default values. Renaming variables in find-cli tests.

* Update spacy/cli/find_threshold.py

Co-authored-by: Adriane Boyd <adrianeboyd@gmail.com>

* Remove adding labels in tests.

* Remove unused error

* Undo changes to PRFScorer

* Change default value for n_trials. Log table iteratively.

* Add warnings for pointless applications of find_threshold().

* Fix imports.

* Adjust type check of TextCategorizer to exclude subclasses.

* Change check of if there's only one unique value in scores.

* Update spacy/cli/find_threshold.py

Co-authored-by: Sofie Van Landeghem <svlandeg@users.noreply.github.com>

* Incorporate feedback.

* Fix test issue. Update docstring.

* Update docs & docstring.

* Update spacy/tests/test_cli.py

Co-authored-by: Adriane Boyd <adrianeboyd@gmail.com>

* Add examples to docs. Rename _nlp to nlp in tests.

* Update spacy/cli/find_threshold.py

Co-authored-by: Sofie Van Landeghem <svlandeg@users.noreply.github.com>

* Update spacy/cli/find_threshold.py

Co-authored-by: Sofie Van Landeghem <svlandeg@users.noreply.github.com>

Co-authored-by: Adriane Boyd <adrianeboyd@gmail.com>
Co-authored-by: Sofie Van Landeghem <svlandeg@users.noreply.github.com>
2022-11-25 11:44:55 +01:00
kadarakos dece775279
correct ndim in docs (#11869) 2022-11-25 11:31:28 +01:00
Adriane Boyd 30d31fd335
Update Russian and Ukrainian lemmatizers (#11811)
* pymorph2 issues #11620, #11626, #11625:
- #11620: pymorphy2_lookup
- #11626: handle multiple forms pointing to the same normal form + handling empty POS tag
- #11625: matching DET that are labelled as PRON by pymorhp2

* Move lemmatizer algorithm changes back into RussianLemmatizer

* Fix uk pymorphy3_lookup mode init

* Move and update tests for ru/uk lookup lemmatizer modes

* Fix typo

* Remove traces of previous behavior for uninflected POS

* Refactor to private generic-looking pymorphy methods

* Remove xfailed uk lemmatizer cases

* Update spacy/lang/ru/lemmatizer.py

Co-authored-by: Richard Hudson <richard@explosion.ai>

Co-authored-by: Dmytro S Lituiev <d.lituiev@gmail.com>
Co-authored-by: Richard Hudson <richard@explosion.ai>
2022-11-25 11:12:46 +01:00
Adriane Boyd 8f062b849c
Fix Matcher cython profile=True header (#11867) 2022-11-24 16:03:42 +01:00
Madeesh Kannan 5ea14af32b
Add `training.before_update` callback (#11739)
* Add `training.before_update` callback

This callback can be used to implement training paradigms like gradual (un)freezing of components (e.g: the Transformer) after a certain number of training steps to mitigate catastrophic forgetting during fine-tuning.

* Fix type annotation, default config value

* Generalize arguments passed to the callback

* Update schema

* Pass `epoch` to callback, rename `current_step` to `step`

* Add test

* Simplify test

* Replace config string with `spacy.blank`

* Apply suggestions from code review

Co-authored-by: Adriane Boyd <adrianeboyd@gmail.com>

* Cleanup imports

Co-authored-by: Adriane Boyd <adrianeboyd@gmail.com>
2022-11-23 17:54:58 +01:00
Paul O'Leary McCann 8271cfb4cd
Remove Learning Path spaCy (#11846) 2022-11-23 11:03:18 +01:00
Paul O'Leary McCann f1ddac187d
Remove unused error object (#11837) 2022-11-23 10:51:31 +01:00
Marcus Blättermann ecbf052abd
Remove `README.md` content from styleguide 2022-11-23 02:04:54 +01:00
Marcus Blättermann 5659eeaadd
Remove styleguide content from `README.md` 2022-11-23 02:04:54 +01:00