* verbose and tag_map options
* adding init_tok2vec option and only changing the tok2vec that is specified
* adding omit_extra_lookups and verifying textcat config
* wip
* pretrain bugfix
* add replace and resume options
* train_textcat fix
* raw text functionality
* improve UX when KeyError or when input data can't be parsed
* avoid unnecessary access to goldparse in TextCat pipe
* save performance information in nlp.meta
* add noise_level to config
* move nn_parser's defaults to config file
* multitask in config - doesn't work yet
* scorer offering both F and AUC options, need to be specified in config
* add textcat verification code from old train script
* small fixes to config files
* clean up
* set default config for ner/parser to allow create_pipe to work as before
* two more test fixes
* small fixes
* cleanup
* fix NER pickling + additional unit test
* create_pipe as before
* setting KB in the EL constructor, similar to how the model is passed on
* removing wikipedia example files - moved to projects
* throw an error when nlp.update is called with 2 positional arguments
* rewriting the config logic in create pipe to accomodate for other objects (e.g. KB) in the config
* update config files with new parameters
* avoid training pipeline components that don't have a model (like sentencizer)
* various small fixes + UX improvements
* small fixes
* set thinc to 8.0.0a9 everywhere
* remove outdated comment
* Fix most_similar for vectors with unused rows
Address issues related to the unused rows in the vector table and
`most_similar`:
* Update `most_similar()` to search only through rows that are in use
according to `key2row`.
* Raise an error when `most_similar(n=n)` is larger than the number of
vectors in the table.
* Set and restore `_unset` correctly when vectors are added or
deserialized so that new vectors are added in the correct row.
* Set data and keys to the same length in `Vocab.prune_vectors()` to
avoid spurious entries in `key2row`.
* Fix regression test using `most_similar`
Co-authored-by: Matthew Honnibal <honnibal+gh@gmail.com>
* Add warning for misaligned character offset spans
* Resolve conflict
* Filter warnings in example scripts
Filter warnings in example scripts to show warnings once, in particular
warnings about misaligned entities.
Co-authored-by: Ines Montani <ines@ines.io>
* make disable_pipes deprecated in favour of the new toggle_pipes
* rewrite disable_pipes statements
* update documentation
* remove bin/wiki_entity_linking folder
* one more fix
* remove deprecated link to documentation
* few more doc fixes
* add note about name change to the docs
* restore original disable_pipes
* small fixes
* fix typo
* fix error number to W096
* rename to select_pipes
* also make changes to the documentation
Co-authored-by: Matthew Honnibal <honnibal+gh@gmail.com>
Check that row is within bounds for the vector data array when adding a
vector.
Don't add vectors with rank OOV_RANK in `init-model` (change is due to
shift from OOV as 0 to OOV as OOV_RANK).
Reconstruction of the original PR #4697 by @MiniLau.
Removes unused `SENT_END` symbol and `IS_SENT_END` from `Matcher` schema
because the Matcher is only going to be able to support `IS_SENT_START`.
Improve GoldParse NER alignment by including all cases where the start
and end of the NER span can be aligned, regardless of internal
tokenization differences.
To do this, convert BILUO tags to character offsets, check start/end
alignment with `doc.char_span()`, and assign the BILUO tags for the
aligned spans. Alignment for `O/-` tags is handled through the
one-to-one and multi alignments.
* Matcher support for Span, as well as Doc #5056
* Removes an import unused
* Signed contributors agreement
* Code optimization and better test
* Add error message for bad Matcher call argument
* Fix merging
* Add Doc init from list of words and text
Add an option to initialize a `Doc` from a text and list of words where
the words may or may not include all whitespace tokens. If the text and
words are mismatched, raise an error.
* Fix error code
* Remove all whitespace before aligning words/text
* Move words/text init to util function
* Update error message
* Rename to get_words_and_spaces
* Fix formatting
* Modify Vector.resize to work with cupy
Modify `Vectors.resize` to work with cupy. Modify behavior when resizing
to a different vector dimension so that individual vectors are truncated
or extended with zeros instead of having the original values filled into
the new shape without regard for the original axes.
* Update spacy/tests/vocab_vectors/test_vectors.py
Co-Authored-By: Matthew Honnibal <honnibal+gh@gmail.com>
Co-authored-by: Matthew Honnibal <honnibal+gh@gmail.com>
* Improve token head verification
Improve the verification for valid token heads when heads are set:
* in `Token.head`: heads come from the same document
* in `Doc.from_array()`: head indices are within the bounds of the
document
* Improve error message
* fix grad_clip naming
* cleaning up pretrained_vectors out of cfg
* further refactoring Model init's
* move Model building out of pipes
* further refactor to require a model config when creating a pipe
* small fixes
* making cfg in nn_parser more consistent
* fixing nr_class for parser
* fixing nn_parser's nO
* fix printing of loss
* architectures in own file per type, consistent naming
* convenience methods default_tagger_config and default_tok2vec_config
* let create_pipe access default config if available for that component
* default_parser_config
* move defaults to separate folder
* allow reading nlp from package or dir with argument 'name'
* architecture spacy.VocabVectors.v1 to read static vectors from file
* cleanup
* default configs for nel, textcat, morphologizer, tensorizer
* fix imports
* fixing unit tests
* fixes and clean up
* fixing defaults, nO, fix unit tests
* restore parser IO
* fix IO
* 'fix' serialization test
* add *.cfg to manifest
* fix example configs with additional arguments
* replace Morpohologizer with Tagger
* add IO bit when testing overfitting of tagger (currently failing)
* fix IO - don't initialize when reading from disk
* expand overfitting tests to also check IO goes OK
* remove dropout from HashEmbed to fix Tagger performance
* add defaults for sentrec
* update thinc
* always pass a Model instance to a Pipe
* fix piped_added statement
* remove obsolete W029
* remove obsolete errors
* restore byte checking tests (work again)
* clean up test
* further test cleanup
* convert from config to Model in create_pipe
* bring back error when component is not initialized
* cleanup
* remove calls for nlp2.begin_training
* use thinc.api in imports
* allow setting charembed's nM and nC
* fix for hardcoded nM/nC + unit test
* formatting fixes
* trigger build
* Restructure tag maps for MorphAnalysis changes
Prepare tag maps for upcoming MorphAnalysis changes that allow
arbritrary features.
* Use default tag map rather than duplicating for ca / uk / vi
* Import tag map into defaults for ga
* Modify tag maps so all morphological fields and features are strings
* Move features from `"Other"` to the top level
* Rewrite tuples as strings separated by `","`
* Rewrite morph symbols for fr lemmatizer as strings
* Export MorphAnalysis under spacy.tokens
* Modify morphology to support arbitrary features
Modify `Morphology` and `MorphAnalysis` so that arbitrary features are
supported.
* Modify `MorphAnalysisC` so that it can support arbitrary features and
multiple values per field. `MorphAnalysisC` is redesigned to contain:
* key: hash of UD FEATS string of morphological features
* array of `MorphFeatureC` structs that each contain a hash of `Field`
and `Field=Value` for a given morphological feature, which makes it
possible to:
* find features by field
* represent multiple values for a given field
* `get_field()` is renamed to `get_by_field()` and is no longer `nogil`.
Instead a new helper function `get_n_by_field()` is `nogil` and returns
`n` features by field.
* `MorphAnalysis.get()` returns all possible values for a field as a
list of individual features such as `["Tense=Pres", "Tense=Past"]`.
* `MorphAnalysis`'s `str()` and `repr()` are the UD FEATS string.
* `Morphology.feats_to_dict()` converts a UD FEATS string to a dict
where:
* Each field has one entry in the dict
* Multiple values remain separated by a separator in the value string
* `Token.morph_` returns the UD FEATS string and you can set
`Token.morph_` with a UD FEATS string or with a tag map dict.
* Modify get_by_field to use np.ndarray
Modify `get_by_field()` to use np.ndarray. Remove `max_results` from
`get_n_by_field()` and always iterate over all the fields.
* Rewrite without MorphFeatureC
* Add shortcut for existing feats strings as keys
Add shortcut for existing feats strings as keys in `Morphology.add()`.
* Check for '_' as empty analysis when adding morphs
* Extend helper converters in Morphology
Add and extend helper converters that convert and normalize between:
* UD FEATS strings (`"Case=dat,gen|Number=sing"`)
* per-field dict of feats (`{"Case": "dat,gen", "Number": "sing"}`)
* list of individual features (`["Case=dat", "Case=gen",
"Number=sing"]`)
All converters sort fields and values where applicable.
* label in span not writable anymore
* Revert "label in span not writable anymore"
This reverts commit ab442338c8.
* provide more friendly error msg for parsing file
Sofie Van Landeghem