364 lines
16 KiB
Markdown
364 lines
16 KiB
Markdown
# Contributing
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Welcome to the PyTorch Lightning community! We're building the most advanced research platform on the planet to implement the latest, best practices that the amazing PyTorch team rolls out!
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## Main Core Value: One less thing to remember
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Simplify the API as much as possible from the user perspective.
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Any additions or improvements should minimize the things the user needs to remember.
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For example: One benefit of the validation_step is that the user doesn't have to remember to set the model to .eval().
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This helps users avoid all sorts of subtle errors.
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## Lightning Design Principles
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We encourage all sorts of contributions you're interested in adding! When coding for lightning, please follow these principles.
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#### No PyTorch Interference
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We don't want to add any abstractions on top of pure PyTorch.
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This gives researchers all the control they need without having to learn yet another framework.
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#### Simple Internal Code
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It's useful for users to look at the code and understand very quickly what's happening.
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Many users won't be engineers. Thus we need to value clear, simple code over condensed ninja moves.
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While that's super cool, this isn't the project for that :)
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#### Force User Decisions To Best Practices
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There are 1,000 ways to do something. However, eventually one popular solution becomes standard practice, and everyone follows.
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We try to find the best way to solve a particular problem, and then force our users to use it for readability and simplicity.
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A good example is accumulated gradients.
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There are many different ways to implement it, we just pick one and force users to use it.
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A bad forced decision would be to make users use a specific library to do something.
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When something becomes a best practice, we add it to the framework. This is usually something like bits of code in utils or in the model file that everyone keeps adding over and over again across projects. When this happens, bring that code inside the trainer and add a flag for it.
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#### Simple External API
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What makes sense to you may not make sense to others. When creating an issue with an API change suggestion, please validate that it makes sense for others.
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Treat code changes the way you treat a startup: validate that it's a needed feature, then add if it makes sense for many people.
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#### Backward-compatible API
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We all hate updating our deep learning packages because we don't want to refactor a bunch of stuff. In Lightning, we make sure every change we make which could break an API is backward compatible with good deprecation warnings.
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**You shouldn't be afraid to upgrade Lightning :)**
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#### Gain User Trust
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As a researcher, you can't have any part of your code going wrong. So, make thorough tests to ensure that every implementation of a new trick or subtle change is correct.
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#### Interoperability
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Have a favorite feature from other libraries like fast.ai or transformers? Those should just work with lightning as well. Grab your favorite model or learning rate scheduler from your favorite library and run it in Lightning.
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---
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## Contribution Types
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We are always looking for help implementing new features or fixing bugs.
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A lot of good work has already been done in project mechanics (requirements.txt, setup.py, pep8, badges, ci, etc...) so we're in a good state there thanks to all the early contributors (even pre-beta release)!
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### Bug Fixes:
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1. If you find a bug please submit a github issue.
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- Make sure the title explains the issue.
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- Describe your setup, what you are trying to do, expected vs. actual behaviour. Please add configs and code samples.
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- Add details on how to reproduce the issue - a minimal test case is always best, colab is also great.
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Note, that the sample code shall be minimal and if needed with publicly available data.
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2. Try to fix it or recommend a solution. We highly recommend to use test-driven approach:
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- Convert your minimal code example to a unit/integration test with assert on expected results.
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- Start by debugging the issue... You can run just this particular test in your IDE and draft a fix.
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- Verify that your test case fails on the master branch and only passes with the fix applied.
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3. Submit a PR!
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_**Note**, even if you do not find the solution, sending a PR with a test covering the issue is a valid contribution and we can help you or finish it with you :]_
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### New Features:
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1. Submit a github issue - describe what is the motivation of such feature (adding the use case or an example is helpful).
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2. Let's discuss to determine the feature scope.
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3. Submit a PR! We recommend test driven approach to adding new features as well:
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- Write a test for the functionality you want to add.
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- Write the functional code until the test passes.
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4. Add/update the relevant tests!
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- [This PR](https://github.com/PyTorchLightning/pytorch-lightning/pull/2671) is a good example for adding a new metric, and [this one for a new logger](https://github.com/PyTorchLightning/pytorch-lightning/pull/2721).
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### Test cases:
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Want to keep Lightning healthy? Love seeing those green tests? So do we! How to we keep it that way? We write tests! We value tests contribution even more than new features.
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Most of the tests in PyTorch Lightning train a trial MNIST model under various trainer conditions (ddp, ddp2+amp, etc...). The tests expect the model to perform to a reasonable degree of testing accuracy to pass. Want to add a new test case and not sure how? [Talk to us!](https://join.slack.com/t/pytorch-lightning/shared_invite/zt-f6bl2l0l-JYMK3tbAgAmGRrlNr00f1A)
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---
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## Guidelines
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### Original code
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All added or edited code shall be the own original work of the particular contributor.
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If you use some third-party implementation, all such blocks/functions/modules shall be properly referred and if possible also agreed by code's author. For example - `This code is inspired from http://...`.
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In case you adding new dependencies, make sure that they are compatible with the actual PyTorch Lightning license (ie. dependencies should be _at least_ as permissive as the PyTorch Lightning license).
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### Coding Style
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1. Use f-strings for output formation (except logging when we stay with lazy `logging.info("Hello %s!", name)`.
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2. Black code formatter is used using a `pre-commit` hook.
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### Documentation
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We are using Sphinx with Napoleon extension.
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Moreover, we set Google style to follow with type convention.
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- [Napoleon formatting with Google style](https://sphinxcontrib-napoleon.readthedocs.io/en/latest/example_google.html)
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- [ReStructured Text (reST)](https://docs.pylonsproject.org/projects/docs-style-guide/)
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- [Paragraph-level markup](https://www.sphinx-doc.org/en/1.5/markup/para.html)
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See following short example of a sample function taking one position string and optional
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```python
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from typing import Optional
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def my_func(param_a: int, param_b: Optional[float] = None) -> str:
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"""Sample function.
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Args:
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param_a: first parameter
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param_b: second parameter
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Return:
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sum of both numbers
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Example:
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Sample doctest example...
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>>> my_func(1, 2)
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3
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.. note:: If you want to add something.
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"""
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p = param_b if param_b else 0
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return str(param_a + p)
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```
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When updating the docs make sure to build them first locally and visually inspect the html files (in the browser) for
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formatting errors. In certain cases, a missing blank line or a wrong indent can lead to a broken layout.
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Run these commands
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```bash
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pip install -r requirements/docs.txt
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cd docs
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make html
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```
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and open `docs/build/html/index.html` in your browser.
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Notes:
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- You need to have LaTeX installed for rendering math equations. You can for example install TeXLive by doing one of the following:
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- on Ubuntu (Linux) run `apt-get install texlive` or otherwise follow the instructions on the TeXLive website
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- use the [RTD docker image](https://hub.docker.com/r/readthedocs/build)
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- with PL used class meta you need to use python 3.7 or higher
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When you send a PR the continuous integration will run tests and build the docs. You can access a preview of the html pages in the
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_Artifacts_ tab in CircleCI when you click on the task named _ci/circleci: Build-Docs_ at the bottom of the PR page.
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### Testing
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**Local:** Testing your work locally will help you speed up the process since it allows you to focus on particular (failing) test-cases.
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To setup a local development environment, install both local and test dependencies:
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```bash
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python -m pip install ".[dev, examples]"
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python -m pip install pre-commit
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```
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You can run the full test-case in your terminal via this make script:
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```bash
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make test
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```
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Note: if your computer does not have multi-GPU nor TPU these tests are skipped.
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**GitHub Actions:** For convenience, you can also use your own GHActions building which will be triggered with each commit.
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This is useful if you do not test against all required dependency versions.
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**Docker:** Another option is utilize the [pytorch lightning cuda base docker image](https://hub.docker.com/repository/docker/pytorchlightning/pytorch_lightning/tags?page=1&name=cuda). You can then run:
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```bash
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python -m pytest pytorch_lightning tests pl_examples -v --flake8
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```
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### Pull Request
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We welcome any useful contribution! For your convenience here's a recommended workflow:
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0. Think about what you want to do - fix a bug, repair docs, etc. If you want to implement a new feature or enhance an existing one, start by opening a GitHub issue to explain the feature and the motivation. Members from core-contributors will take a look (it might take some time - we are often overloaded with issues!) and discuss it. Once an agreement was reached - start coding.
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1. Start your work locally (usually until you need our CI testing).
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- Create a branch and prepare your changes.
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- Tip: do not work with your master directly, it may become complicated when you need to rebase.
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- Tip: give your PR a good name! It will be useful later when you may work on multiple tasks/PRs.
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2. Test your code!
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- It is always good practice to start coding by creating a test case, verifying it breaks with current behaviour, and passes with your new changes.
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- Make sure your new tests cover all different edge cases.
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- Make sure all exceptions are handled.
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3. Create a "Draft PR" which is clearly marked, to let us know you don't need feedback yet.
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4. When you feel ready for integrating your work, mark your PR "Ready for review".
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- Your code should be readable and follow the project's design principles.
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- Make sure all tests are passing.
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- Make sure you add a GitHub issue to your PR.
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5. Use tags in PR name for following cases:
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- **[blocked by #<number>]** if you work is depending on others changes.
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- **[wip]** when you start to re-edit your work, mark it so no one will accidentally merge it in meantime.
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### Question & Answer
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1. **How can I help/contribute?**
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All help is extremely welcome - reporting bugs, fixing documentation, adding test cases, solving issues and preparing bug fixes. To solve some issues you can start with label [good first issue](https://github.com/PyTorchLightning/pytorch-lightning/issues?q=is%3Aopen+is%3Aissue+label%3A%22good+first+issue%22) or chose something close to your domain with label [help wanted](https://github.com/PyTorchLightning/pytorch-lightning/issues?q=is%3Aopen+is%3Aissue+label%3A%22help+wanted%22). Before you start to implement anything check that the issue description that it is clear and self-assign the task to you (if it is not possible, just comment that you take it and we assign it to you...).
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2. **Is there a recommendation for branch names?**
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We do not rely on the name convention so far you are working with your own fork. Anyway it would be nice to follow this convention `<type>/<issue-id>_<short-name>` where the types are: `bugfix`, `feature`, `docs`, `tests`, ...
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3. **How to rebase my PR?**
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We recommend creating a PR in separate branch other than `master`, especially if you plan submitting several changes and do not want to wait until the first one is resolved (we can work on them in parallel).
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First, make sure you have set [upstream](https://help.github.com/en/github/collaborating-with-issues-and-pull-requests/configuring-a-remote-for-a-fork) by running:
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```bash
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git remote add upstream https://github.com/PyTorchLightning/pytorch-lightning.git
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```
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You'll know its set up right if you run `git remote -v` and see something similar to this:
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```bash
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origin https://github.com/{YOUR_USERNAME}/pytorch-lightning.git (fetch)
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origin https://github.com/{YOUR_USERNAME}/pytorch-lightning.git (push)
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upstream https://github.com/PyTorchLightning/pytorch-lightning.git (fetch)
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upstream https://github.com/PyTorchLightning/pytorch-lightning.git (push)
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```
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Now you can update your master with upstream's master by running:
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```bash
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git fetch --all --prune
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git checkout master
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git merge upstream/master
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```
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Finally, checkout your feature branch and rebase it with master before pushing up your feature branch:
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```bash
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git checkout my-PR-branch
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git rebase master
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# follow git instructions to resolve conflicts
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git push -f
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```
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Eventually, you can perform the rebasing directly from upstream after setting it up:
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```bash
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git fetch --all --prune
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git rebase upstream/master
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# follow git instructions to resolve conflicts
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git push -f
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```
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4. **How to add new tests**
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We are using [pytest](https://docs.pytest.org/en/stable/) in Pytorch Lightning.
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Here are tutorials:
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* (recommended) [Visual Testing with pytest](https://www.youtube.com/playlist?list=PLCTHcU1KoD99Rim2tzg-IhYY2iu9FFvNo) from JetBrains on YouTube
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* [Effective Python Testing With Pytest](https://realpython.com/pytest-python-testing/) article on realpython.com
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Here is the process to create a new test
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* 0. Optional: Follow tutorials !
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* 1. Find a file in tests/ which match what you want to test. If none, create one.
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* 2. Use this template to get started !
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* 3. Use `BoringModel and derivates to test out your code`.
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```python
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# TEST SHOULD BE IN YOUR FILE: tests/..../...py
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# RUN OUR TEST WITH: pytest tests/..../...py::test_explain_what_is_being_tested --verbose --capture=no
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# TEST CODE TEMPLATE
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# pytest decorator
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# @pytest.mark.skipif(not torch.cuda.is_available(), reason="test requires GPU machine")
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def test_explain_what_is_being_tested(tmpdir):
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"""
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Test description about text reason to be
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"""
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# os.environ["PL_DEV_DEBUG"] = '1' optional. When activated, you can use internal trainer.dev_debugger
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class ExtendedModel(BoringModel):
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...
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model = ExtendedModel()
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# BoringModel is a functional model. You might want to set methods to None to test your behaviour
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# Example: model.training_step_end = None
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trainer = Trainer(
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default_root_dir=tmpdir, # will save everything within a tmpdir generated for this test
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...
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)
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trainer.fit(model)
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result = trainer.test()
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# assert the behaviour is correct.
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assert ...
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assert ...
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```
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### Bonus Workflow Tip
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If you don't want to remember all the commands above every time you want to push some code/setup a Lightning Dev environment on a new VM, you can set up bash aliases for some common commands. You can add these to one of your `~/.bashrc`, `~/.zshrc`, or `~/.bash_aliases` files.
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NOTE: Once you edit one of these files, remember to `source` it or restart your shell. (ex. `source ~/.bashrc` if you added these to your `~/.bashrc` file).
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```bash
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plclone (){
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git clone https://github.com/{YOUR_USERNAME}/pytorch-lightning.git
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cd pytorch-lightning
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git remote add upstream https://github.com/PyTorchLightning/pytorch-lightning.git
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# This is just here to print out info about your remote upstream/origin
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git remote -v
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}
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plfetch (){
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git fetch --all --prune
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git checkout master
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git merge upstream/master
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}
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# Rebase your branch with upstream's master
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# plrebase <your-branch-name>
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plrebase (){
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git checkout $@
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git rebase master
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}
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```
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Now, you can:
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- clone your fork and set up upstream by running `plclone` from your terminal
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- fetch upstream and update your local master branch with it by running `plfetch`
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- rebase your feature branch (after running `plfetch`) by running `plrebase your-branch-name`
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