lightning/docs/source/introduction_guide.rst

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doctest for .rst files (#1511) * add doctest to circleci * Revert "add doctest to circleci" This reverts commit c45b34ea911a81f87989f6c3a832b1e8d8c471c6. * Revert "Revert "add doctest to circleci"" This reverts commit 41fca97fdcfe1cf4f6bdb3bbba75d25fa3b11f70. * doctest docs rst files * Revert "doctest docs rst files" This reverts commit b4a2e83e3da5ed1909de500ec14b6b614527c07f. * doctest only rst * doctest debugging.rst * doctest apex * doctest callbacks * doctest early stopping * doctest for child modules * doctest experiment reporting * indentation * doctest fast training * doctest for hyperparams * doctests for lr_finder * doctests multi-gpu * more doctest * make doctest drone * fix label build error * update fast training * update invalid imports * fix problem with int device count * rebase stuff * wip * wip * wip * intro guide * add missing code block * circleci * logger import for doctest * test if doctest runs on drone * fix mnist download * also run install deps for building docs * install cmake * try sudo * hide output * try pip stuff * try to mock horovod * Tranfer -> Transfer * add torchvision to extras * revert pip stuff * mlflow file location * do not mock torch * torchvision * drone extra req. * try higher sphinx version * Revert "try higher sphinx version" This reverts commit 490ac28e46d6fd52352640dfdf0d765befa56988. * try coverage command * try coverage command * try undoc flag * newline * undo drone * report coverage * review Co-authored-by: Jirka Borovec <Borda@users.noreply.github.com> * remove torchvision from extras * skip tests only if torchvision not available * fix testoutput torchvision Co-authored-by: Jirka Borovec <Borda@users.noreply.github.com>
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.. testsetup:: *
from pytorch_lightning.core.lightning import LightningModule
from pytorch_lightning.core.datamodule import LightningDataModule
doctest for .rst files (#1511) * add doctest to circleci * Revert "add doctest to circleci" This reverts commit c45b34ea911a81f87989f6c3a832b1e8d8c471c6. * Revert "Revert "add doctest to circleci"" This reverts commit 41fca97fdcfe1cf4f6bdb3bbba75d25fa3b11f70. * doctest docs rst files * Revert "doctest docs rst files" This reverts commit b4a2e83e3da5ed1909de500ec14b6b614527c07f. * doctest only rst * doctest debugging.rst * doctest apex * doctest callbacks * doctest early stopping * doctest for child modules * doctest experiment reporting * indentation * doctest fast training * doctest for hyperparams * doctests for lr_finder * doctests multi-gpu * more doctest * make doctest drone * fix label build error * update fast training * update invalid imports * fix problem with int device count * rebase stuff * wip * wip * wip * intro guide * add missing code block * circleci * logger import for doctest * test if doctest runs on drone * fix mnist download * also run install deps for building docs * install cmake * try sudo * hide output * try pip stuff * try to mock horovod * Tranfer -> Transfer * add torchvision to extras * revert pip stuff * mlflow file location * do not mock torch * torchvision * drone extra req. * try higher sphinx version * Revert "try higher sphinx version" This reverts commit 490ac28e46d6fd52352640dfdf0d765befa56988. * try coverage command * try coverage command * try undoc flag * newline * undo drone * report coverage * review Co-authored-by: Jirka Borovec <Borda@users.noreply.github.com> * remove torchvision from extras * skip tests only if torchvision not available * fix testoutput torchvision Co-authored-by: Jirka Borovec <Borda@users.noreply.github.com>
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from pytorch_lightning.trainer.trainer import Trainer
.. _introduction-guide:
doctest for .rst files (#1511) * add doctest to circleci * Revert "add doctest to circleci" This reverts commit c45b34ea911a81f87989f6c3a832b1e8d8c471c6. * Revert "Revert "add doctest to circleci"" This reverts commit 41fca97fdcfe1cf4f6bdb3bbba75d25fa3b11f70. * doctest docs rst files * Revert "doctest docs rst files" This reverts commit b4a2e83e3da5ed1909de500ec14b6b614527c07f. * doctest only rst * doctest debugging.rst * doctest apex * doctest callbacks * doctest early stopping * doctest for child modules * doctest experiment reporting * indentation * doctest fast training * doctest for hyperparams * doctests for lr_finder * doctests multi-gpu * more doctest * make doctest drone * fix label build error * update fast training * update invalid imports * fix problem with int device count * rebase stuff * wip * wip * wip * intro guide * add missing code block * circleci * logger import for doctest * test if doctest runs on drone * fix mnist download * also run install deps for building docs * install cmake * try sudo * hide output * try pip stuff * try to mock horovod * Tranfer -> Transfer * add torchvision to extras * revert pip stuff * mlflow file location * do not mock torch * torchvision * drone extra req. * try higher sphinx version * Revert "try higher sphinx version" This reverts commit 490ac28e46d6fd52352640dfdf0d765befa56988. * try coverage command * try coverage command * try undoc flag * newline * undo drone * report coverage * review Co-authored-by: Jirka Borovec <Borda@users.noreply.github.com> * remove torchvision from extras * skip tests only if torchvision not available * fix testoutput torchvision Co-authored-by: Jirka Borovec <Borda@users.noreply.github.com>
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#########################
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Step-by-step walk-through
#########################
This guide will walk you through the core pieces of PyTorch Lightning.
We'll accomplish the following:
- Implement an MNIST classifier.
- Use inheritance to implement an AutoEncoder
.. note:: Any DL/ML PyTorch project fits into the Lightning structure. Here we just focus on 3 types
of research to illustrate.
--------------
*********************
Why PyTorch Lightning
*********************
a. Less boilerplate
===================
Research and production code starts with simple code, but quickly grows in complexity
once you add gpu training, 16-bit, checkpointing, logging, etc...
PyTorch Lightning implements these features for you and tests them rigorously to make sure you can
instead focus on the research idea.
Writing less engineering/bolierplate code means:
- fewer bugs
- faster iteration
- faster prototyping
b. More functionality
=====================
In PyTorch Lightning you leverage code written by hundreds of AI researchers,
research engs and PhDs from the world's top AI labs,
implementing all the latest best practices and SOTA features such as
- GPU, Multi GPU, TPU training
- Multi node training
- Auto logging
- ...
- Gradient accumulation
c. Less error prone
===================
Why re-invent the wheel?
Use PyTorch Lightning to enjoy a deep learning structure that is rigorously tested (500+ tests)
across CPUs/multi-GPUs/multi-TPUs on every pull-request.
We promise our collective team of 20+ from the top labs has thought about training more than you :)
d. Not a new library
====================
PyTorch Lightning is organized PyTorch - no need to learn a new framework.
Switching your model to Lightning is straight forward - here's a 2-minute video on how to do it.
.. raw:: html
<video width="100%" controls autoplay src="https://pl-bolts-doc-images.s3.us-east-2.amazonaws.com/pl_docs/pl_quick_start_full.m4v"></video>
Your projects WILL grow in complexity and you WILL end up engineering more than trying out new ideas...
Defer the hardest parts to Lightning!
----------------
********************
Lightning Philosophy
********************
Lightning structures your deep learning code in 4 parts:
- Research code
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- Engineering code
- Non-essential code
- Data code
Research code
=============
In the MNIST generation example, the research code
would be the particular system and how it's trained (ie: A GAN or VAE or GPT).
.. code-block:: python
l1 = nn.Linear(...)
l2 = nn.Linear(...)
decoder = Decoder()
x1 = l1(x)
x2 = l2(x2)
out = decoder(features, x)
loss = perceptual_loss(x1, x2, x) + CE(out, x)
In Lightning, this code is organized into a :ref:`lightning-module`.
Engineering code
================
The Engineering code is all the code related to training this system. Things such as early stopping, distribution
over GPUs, 16-bit precision, etc. This is normally code that is THE SAME across most projects.
.. code-block:: python
model.cuda(0)
x = x.cuda(0)
distributed = DistributedParallel(model)
with gpu_zero:
download_data()
dist.barrier()
In Lightning, this code is abstracted out by the :ref:`trainer`.
Non-essential code
==================
This is code that helps the research but isn't relevant to the research code. Some examples might be:
1. Inspect gradients
2. Log to tensorboard.
|
.. code-block:: python
# log samples
z = Q.rsample()
generated = decoder(z)
self.experiment.log('images', generated)
In Lightning this code is organized into :ref:`callbacks`.
Data code
=========
Lightning uses standard PyTorch DataLoaders or anything that gives a batch of data.
This code tends to end up getting messy with transforms, normalization constants and data splitting
spread all over files.
.. code-block:: python
# data
train = MNIST(...)
train, val = split(train, val)
test = MNIST(...)
# transforms
train_transforms = ...
val_transforms = ...
test_transforms = ...
# dataloader ...
# download with dist.barrier() for multi-gpu, etc...
This code gets specially complicated once you start doing multi-gpu training or needing info about
the data to build your models.
In Lightning this code is organized inside a :ref:`data-modules`.
.. note:: DataModules are optional but encouraged, otherwise you can use standard DataModules
----------------
**************************
From MNIST to AutoEncoders
**************************
Installing Lightning
====================
Lightning is trivial to install. We recommend using conda environments
.. code-block:: bash
conda activate my_env
pip install pytorch-lightning
Or without conda environments, use pip.
.. code-block:: bash
pip install pytorch-lightning
Or conda.
.. code-block:: bash
conda install pytorch-lightning -c conda-forge
The research
============
The Model
---------
The :class:`~pytorch_lightning.core.LightningModule` holds all the core research ingredients:
- The model
- The optimizers
- The train/ val/ test steps
Let's first start with the model. In this case we'll design a 3-layer neural network.
doctest for .rst files (#1511) * add doctest to circleci * Revert "add doctest to circleci" This reverts commit c45b34ea911a81f87989f6c3a832b1e8d8c471c6. * Revert "Revert "add doctest to circleci"" This reverts commit 41fca97fdcfe1cf4f6bdb3bbba75d25fa3b11f70. * doctest docs rst files * Revert "doctest docs rst files" This reverts commit b4a2e83e3da5ed1909de500ec14b6b614527c07f. * doctest only rst * doctest debugging.rst * doctest apex * doctest callbacks * doctest early stopping * doctest for child modules * doctest experiment reporting * indentation * doctest fast training * doctest for hyperparams * doctests for lr_finder * doctests multi-gpu * more doctest * make doctest drone * fix label build error * update fast training * update invalid imports * fix problem with int device count * rebase stuff * wip * wip * wip * intro guide * add missing code block * circleci * logger import for doctest * test if doctest runs on drone * fix mnist download * also run install deps for building docs * install cmake * try sudo * hide output * try pip stuff * try to mock horovod * Tranfer -> Transfer * add torchvision to extras * revert pip stuff * mlflow file location * do not mock torch * torchvision * drone extra req. * try higher sphinx version * Revert "try higher sphinx version" This reverts commit 490ac28e46d6fd52352640dfdf0d765befa56988. * try coverage command * try coverage command * try undoc flag * newline * undo drone * report coverage * review Co-authored-by: Jirka Borovec <Borda@users.noreply.github.com> * remove torchvision from extras * skip tests only if torchvision not available * fix testoutput torchvision Co-authored-by: Jirka Borovec <Borda@users.noreply.github.com>
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.. testcode::
import torch
from torch.nn import functional as F
from torch import nn
doctest for .rst files (#1511) * add doctest to circleci * Revert "add doctest to circleci" This reverts commit c45b34ea911a81f87989f6c3a832b1e8d8c471c6. * Revert "Revert "add doctest to circleci"" This reverts commit 41fca97fdcfe1cf4f6bdb3bbba75d25fa3b11f70. * doctest docs rst files * Revert "doctest docs rst files" This reverts commit b4a2e83e3da5ed1909de500ec14b6b614527c07f. * doctest only rst * doctest debugging.rst * doctest apex * doctest callbacks * doctest early stopping * doctest for child modules * doctest experiment reporting * indentation * doctest fast training * doctest for hyperparams * doctests for lr_finder * doctests multi-gpu * more doctest * make doctest drone * fix label build error * update fast training * update invalid imports * fix problem with int device count * rebase stuff * wip * wip * wip * intro guide * add missing code block * circleci * logger import for doctest * test if doctest runs on drone * fix mnist download * also run install deps for building docs * install cmake * try sudo * hide output * try pip stuff * try to mock horovod * Tranfer -> Transfer * add torchvision to extras * revert pip stuff * mlflow file location * do not mock torch * torchvision * drone extra req. * try higher sphinx version * Revert "try higher sphinx version" This reverts commit 490ac28e46d6fd52352640dfdf0d765befa56988. * try coverage command * try coverage command * try undoc flag * newline * undo drone * report coverage * review Co-authored-by: Jirka Borovec <Borda@users.noreply.github.com> * remove torchvision from extras * skip tests only if torchvision not available * fix testoutput torchvision Co-authored-by: Jirka Borovec <Borda@users.noreply.github.com>
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from pytorch_lightning.core.lightning import LightningModule
doctest for .rst files (#1511) * add doctest to circleci * Revert "add doctest to circleci" This reverts commit c45b34ea911a81f87989f6c3a832b1e8d8c471c6. * Revert "Revert "add doctest to circleci"" This reverts commit 41fca97fdcfe1cf4f6bdb3bbba75d25fa3b11f70. * doctest docs rst files * Revert "doctest docs rst files" This reverts commit b4a2e83e3da5ed1909de500ec14b6b614527c07f. * doctest only rst * doctest debugging.rst * doctest apex * doctest callbacks * doctest early stopping * doctest for child modules * doctest experiment reporting * indentation * doctest fast training * doctest for hyperparams * doctests for lr_finder * doctests multi-gpu * more doctest * make doctest drone * fix label build error * update fast training * update invalid imports * fix problem with int device count * rebase stuff * wip * wip * wip * intro guide * add missing code block * circleci * logger import for doctest * test if doctest runs on drone * fix mnist download * also run install deps for building docs * install cmake * try sudo * hide output * try pip stuff * try to mock horovod * Tranfer -> Transfer * add torchvision to extras * revert pip stuff * mlflow file location * do not mock torch * torchvision * drone extra req. * try higher sphinx version * Revert "try higher sphinx version" This reverts commit 490ac28e46d6fd52352640dfdf0d765befa56988. * try coverage command * try coverage command * try undoc flag * newline * undo drone * report coverage * review Co-authored-by: Jirka Borovec <Borda@users.noreply.github.com> * remove torchvision from extras * skip tests only if torchvision not available * fix testoutput torchvision Co-authored-by: Jirka Borovec <Borda@users.noreply.github.com>
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class LitMNIST(LightningModule):
def __init__(self):
super().__init__()
# mnist images are (1, 28, 28) (channels, width, height)
self.layer_1 = torch.nn.Linear(28 * 28, 128)
self.layer_2 = torch.nn.Linear(128, 256)
self.layer_3 = torch.nn.Linear(256, 10)
def forward(self, x):
batch_size, channels, width, height = x.size()
# (b, 1, 28, 28) -> (b, 1*28*28)
x = x.view(batch_size, -1)
# layer 1
x = self.layer_1(x)
x = torch.relu(x)
# layer 2
x = self.layer_2(x)
x = torch.relu(x)
# layer 3
x = self.layer_3(x)
# probability distribution over labels
x = torch.log_softmax(x, dim=1)
return x
Notice this is a :class:`~pytorch_lightning.core.LightningModule` instead of a `torch.nn.Module`. A LightningModule is
equivalent to a pure PyTorch Module except it has added functionality. However, you can use it EXACTLY the same as you would a PyTorch Module.
doctest for .rst files (#1511) * add doctest to circleci * Revert "add doctest to circleci" This reverts commit c45b34ea911a81f87989f6c3a832b1e8d8c471c6. * Revert "Revert "add doctest to circleci"" This reverts commit 41fca97fdcfe1cf4f6bdb3bbba75d25fa3b11f70. * doctest docs rst files * Revert "doctest docs rst files" This reverts commit b4a2e83e3da5ed1909de500ec14b6b614527c07f. * doctest only rst * doctest debugging.rst * doctest apex * doctest callbacks * doctest early stopping * doctest for child modules * doctest experiment reporting * indentation * doctest fast training * doctest for hyperparams * doctests for lr_finder * doctests multi-gpu * more doctest * make doctest drone * fix label build error * update fast training * update invalid imports * fix problem with int device count * rebase stuff * wip * wip * wip * intro guide * add missing code block * circleci * logger import for doctest * test if doctest runs on drone * fix mnist download * also run install deps for building docs * install cmake * try sudo * hide output * try pip stuff * try to mock horovod * Tranfer -> Transfer * add torchvision to extras * revert pip stuff * mlflow file location * do not mock torch * torchvision * drone extra req. * try higher sphinx version * Revert "try higher sphinx version" This reverts commit 490ac28e46d6fd52352640dfdf0d765befa56988. * try coverage command * try coverage command * try undoc flag * newline * undo drone * report coverage * review Co-authored-by: Jirka Borovec <Borda@users.noreply.github.com> * remove torchvision from extras * skip tests only if torchvision not available * fix testoutput torchvision Co-authored-by: Jirka Borovec <Borda@users.noreply.github.com>
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.. testcode::
net = LitMNIST()
x = torch.Tensor(1, 1, 28, 28)
out = net(x)
.. rst-class:: sphx-glr-script-out
Out:
.. code-block:: python
torch.Size([1, 10])
Data
----
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Lightning operates on pure dataloaders. Here's the PyTorch code for loading MNIST.
doctest for .rst files (#1511) * add doctest to circleci * Revert "add doctest to circleci" This reverts commit c45b34ea911a81f87989f6c3a832b1e8d8c471c6. * Revert "Revert "add doctest to circleci"" This reverts commit 41fca97fdcfe1cf4f6bdb3bbba75d25fa3b11f70. * doctest docs rst files * Revert "doctest docs rst files" This reverts commit b4a2e83e3da5ed1909de500ec14b6b614527c07f. * doctest only rst * doctest debugging.rst * doctest apex * doctest callbacks * doctest early stopping * doctest for child modules * doctest experiment reporting * indentation * doctest fast training * doctest for hyperparams * doctests for lr_finder * doctests multi-gpu * more doctest * make doctest drone * fix label build error * update fast training * update invalid imports * fix problem with int device count * rebase stuff * wip * wip * wip * intro guide * add missing code block * circleci * logger import for doctest * test if doctest runs on drone * fix mnist download * also run install deps for building docs * install cmake * try sudo * hide output * try pip stuff * try to mock horovod * Tranfer -> Transfer * add torchvision to extras * revert pip stuff * mlflow file location * do not mock torch * torchvision * drone extra req. * try higher sphinx version * Revert "try higher sphinx version" This reverts commit 490ac28e46d6fd52352640dfdf0d765befa56988. * try coverage command * try coverage command * try undoc flag * newline * undo drone * report coverage * review Co-authored-by: Jirka Borovec <Borda@users.noreply.github.com> * remove torchvision from extras * skip tests only if torchvision not available * fix testoutput torchvision Co-authored-by: Jirka Borovec <Borda@users.noreply.github.com>
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.. testcode::
:skipif: not TORCHVISION_AVAILABLE
from torch.utils.data import DataLoader, random_split
from torchvision.datasets import MNIST
import os
from torchvision import datasets, transforms
# transforms
# prepare transforms standard to MNIST
transform=transforms.Compose([transforms.ToTensor(),
transforms.Normalize((0.1307,), (0.3081,))])
# data
mnist_train = MNIST(os.getcwd(), train=True, download=True)
mnist_train = DataLoader(mnist_train, batch_size=64)
doctest for .rst files (#1511) * add doctest to circleci * Revert "add doctest to circleci" This reverts commit c45b34ea911a81f87989f6c3a832b1e8d8c471c6. * Revert "Revert "add doctest to circleci"" This reverts commit 41fca97fdcfe1cf4f6bdb3bbba75d25fa3b11f70. * doctest docs rst files * Revert "doctest docs rst files" This reverts commit b4a2e83e3da5ed1909de500ec14b6b614527c07f. * doctest only rst * doctest debugging.rst * doctest apex * doctest callbacks * doctest early stopping * doctest for child modules * doctest experiment reporting * indentation * doctest fast training * doctest for hyperparams * doctests for lr_finder * doctests multi-gpu * more doctest * make doctest drone * fix label build error * update fast training * update invalid imports * fix problem with int device count * rebase stuff * wip * wip * wip * intro guide * add missing code block * circleci * logger import for doctest * test if doctest runs on drone * fix mnist download * also run install deps for building docs * install cmake * try sudo * hide output * try pip stuff * try to mock horovod * Tranfer -> Transfer * add torchvision to extras * revert pip stuff * mlflow file location * do not mock torch * torchvision * drone extra req. * try higher sphinx version * Revert "try higher sphinx version" This reverts commit 490ac28e46d6fd52352640dfdf0d765befa56988. * try coverage command * try coverage command * try undoc flag * newline * undo drone * report coverage * review Co-authored-by: Jirka Borovec <Borda@users.noreply.github.com> * remove torchvision from extras * skip tests only if torchvision not available * fix testoutput torchvision Co-authored-by: Jirka Borovec <Borda@users.noreply.github.com>
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.. testoutput::
:hide:
:skipif: os.path.isdir(os.path.join(os.getcwd(), 'MNIST')) or not TORCHVISION_AVAILABLE
Downloading ...
Extracting ...
Downloading ...
Extracting ...
Downloading ...
Extracting ...
Processing...
Done!
You can use DataLoaders in 3 ways:
doctest for .rst files (#1511) * add doctest to circleci * Revert "add doctest to circleci" This reverts commit c45b34ea911a81f87989f6c3a832b1e8d8c471c6. * Revert "Revert "add doctest to circleci"" This reverts commit 41fca97fdcfe1cf4f6bdb3bbba75d25fa3b11f70. * doctest docs rst files * Revert "doctest docs rst files" This reverts commit b4a2e83e3da5ed1909de500ec14b6b614527c07f. * doctest only rst * doctest debugging.rst * doctest apex * doctest callbacks * doctest early stopping * doctest for child modules * doctest experiment reporting * indentation * doctest fast training * doctest for hyperparams * doctests for lr_finder * doctests multi-gpu * more doctest * make doctest drone * fix label build error * update fast training * update invalid imports * fix problem with int device count * rebase stuff * wip * wip * wip * intro guide * add missing code block * circleci * logger import for doctest * test if doctest runs on drone * fix mnist download * also run install deps for building docs * install cmake * try sudo * hide output * try pip stuff * try to mock horovod * Tranfer -> Transfer * add torchvision to extras * revert pip stuff * mlflow file location * do not mock torch * torchvision * drone extra req. * try higher sphinx version * Revert "try higher sphinx version" This reverts commit 490ac28e46d6fd52352640dfdf0d765befa56988. * try coverage command * try coverage command * try undoc flag * newline * undo drone * report coverage * review Co-authored-by: Jirka Borovec <Borda@users.noreply.github.com> * remove torchvision from extras * skip tests only if torchvision not available * fix testoutput torchvision Co-authored-by: Jirka Borovec <Borda@users.noreply.github.com>
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1. Pass DataLoaders to .fit()
^^^^^^^^^^^^^^^^^^^^^^^^^^^^^
Pass in the dataloaders to the `.fit()` function.
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.. code-block:: python
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model = LitMNIST()
trainer = Trainer()
trainer.fit(model, mnist_train)
2. LightningModule DataLoaders
^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^
For fast research prototyping, it might be easier to link the model with the dataloaders.
.. code-block:: python
class LitMNIST(pl.LightningModule):
def train_dataloader(self):
# transforms
# prepare transforms standard to MNIST
transform=transforms.Compose([transforms.ToTensor(),
transforms.Normalize((0.1307,), (0.3081,))])
# data
mnist_train = MNIST(os.getcwd(), train=True, download=True)
mnist_train = DataLoader(mnist_train, batch_size=64)
return DataLoader(mnist_train)
def val_dataloader(self):
transforms = ...
return DataLoader(self.val, transforms)
def test_dataloader(self):
transforms = ...
return DataLoader(self.test, transforms)
DataLoaders are already in the model, no need to specify on .fit().
.. code-block:: python
model = LitMNIST()
trainer = Trainer()
trainer.fit(model)
3. DataModules (recommended)
^^^^^^^^^^^^^^^^^^^^^^^^^^^^
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Defining free-floating dataloaders, splits, download instructions and such can get messy.
In this case, it's better to group the full definition of a dataset into a `DataModule` which includes:
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- Download instructions
- Processing instructions
- Split instructions
- Train dataloader
- Val dataloader(s)
- Test dataloader(s)
.. testcode:: python
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class MyDataModule(LightningDataModule):
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def __init__(self):
super().__init__()
self.train_dims = None
self.vocab_size = 0
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doctest for .rst files (#1511) * add doctest to circleci * Revert "add doctest to circleci" This reverts commit c45b34ea911a81f87989f6c3a832b1e8d8c471c6. * Revert "Revert "add doctest to circleci"" This reverts commit 41fca97fdcfe1cf4f6bdb3bbba75d25fa3b11f70. * doctest docs rst files * Revert "doctest docs rst files" This reverts commit b4a2e83e3da5ed1909de500ec14b6b614527c07f. * doctest only rst * doctest debugging.rst * doctest apex * doctest callbacks * doctest early stopping * doctest for child modules * doctest experiment reporting * indentation * doctest fast training * doctest for hyperparams * doctests for lr_finder * doctests multi-gpu * more doctest * make doctest drone * fix label build error * update fast training * update invalid imports * fix problem with int device count * rebase stuff * wip * wip * wip * intro guide * add missing code block * circleci * logger import for doctest * test if doctest runs on drone * fix mnist download * also run install deps for building docs * install cmake * try sudo * hide output * try pip stuff * try to mock horovod * Tranfer -> Transfer * add torchvision to extras * revert pip stuff * mlflow file location * do not mock torch * torchvision * drone extra req. * try higher sphinx version * Revert "try higher sphinx version" This reverts commit 490ac28e46d6fd52352640dfdf0d765befa56988. * try coverage command * try coverage command * try undoc flag * newline * undo drone * report coverage * review Co-authored-by: Jirka Borovec <Borda@users.noreply.github.com> * remove torchvision from extras * skip tests only if torchvision not available * fix testoutput torchvision Co-authored-by: Jirka Borovec <Borda@users.noreply.github.com>
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def prepare_data(self):
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# called only on 1 GPU
download_dataset()
tokenize()
build_vocab()
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def setup(self):
# called on every GPU
vocab = load_vocab
self.vocab_size = len(vocab)
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self.train, self.val, self.test = load_datasets()
self.train_dims = self.train.next_batch.size()
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def train_dataloader(self):
transforms = ...
return DataLoader(self.train, transforms)
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def val_dataloader(self):
transforms = ...
return DataLoader(self.val, transforms)
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def test_dataloader(self):
transforms = ...
return DataLoader(self.test, transforms)
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Using DataModules allows easier sharing of full dataset definitions.
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.. code-block:: python
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# use an MNIST dataset
mnist_dm = MNISTDatamodule()
model = LitModel(num_classes=mnist_dm.num_classes)
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trainer.fit(model, mnist_dm)
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# or other datasets with the same model
imagenet_dm = ImagenetDatamodule()
model = LitModel(num_classes=imagenet_dm.num_classes)
trainer.fit(model, imagenet_dm)
.. note:: `prepare_data` is called only one 1 GPU in distributed training (automatically)
.. note:: `setup` is called on every GPU (automatically)
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Models defined by data
^^^^^^^^^^^^^^^^^^^^^^
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When your models need to know about the data, it's best to process the data before passing it to the model.
.. code-block:: python
# init dm AND call the processing manually
dm = ImagenetDataModule()
dm.prepare_data()
dm.setup()
model = LitModel(out_features=dm.num_classes, img_width=dm.img_width, img_height=dm.img_height)
trainer.fit(model)
1. use `prepare_data` to download and process the dataset.
2. use `setup` to do splits, and build your model internals
|
.. testcode::
class LitMNIST(LightningModule):
def __init__(self):
self.l1 = None
def prepare_data(self):
download_data()
tokenize()
def setup(self, step):
# step is either 'fit' or 'test' 90% of the time not relevant
data = load_data()
num_classes = data.classes
self.l1 = nn.Linear(..., num_classes)
Optimizer
---------
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Next we choose what optimizer to use for training our system.
In PyTorch we do it as follows:
.. code-block:: python
from torch.optim import Adam
optimizer = Adam(LitMNIST().parameters(), lr=1e-3)
In Lightning we do the same but organize it under the configure_optimizers method.
doctest for .rst files (#1511) * add doctest to circleci * Revert "add doctest to circleci" This reverts commit c45b34ea911a81f87989f6c3a832b1e8d8c471c6. * Revert "Revert "add doctest to circleci"" This reverts commit 41fca97fdcfe1cf4f6bdb3bbba75d25fa3b11f70. * doctest docs rst files * Revert "doctest docs rst files" This reverts commit b4a2e83e3da5ed1909de500ec14b6b614527c07f. * doctest only rst * doctest debugging.rst * doctest apex * doctest callbacks * doctest early stopping * doctest for child modules * doctest experiment reporting * indentation * doctest fast training * doctest for hyperparams * doctests for lr_finder * doctests multi-gpu * more doctest * make doctest drone * fix label build error * update fast training * update invalid imports * fix problem with int device count * rebase stuff * wip * wip * wip * intro guide * add missing code block * circleci * logger import for doctest * test if doctest runs on drone * fix mnist download * also run install deps for building docs * install cmake * try sudo * hide output * try pip stuff * try to mock horovod * Tranfer -> Transfer * add torchvision to extras * revert pip stuff * mlflow file location * do not mock torch * torchvision * drone extra req. * try higher sphinx version * Revert "try higher sphinx version" This reverts commit 490ac28e46d6fd52352640dfdf0d765befa56988. * try coverage command * try coverage command * try undoc flag * newline * undo drone * report coverage * review Co-authored-by: Jirka Borovec <Borda@users.noreply.github.com> * remove torchvision from extras * skip tests only if torchvision not available * fix testoutput torchvision Co-authored-by: Jirka Borovec <Borda@users.noreply.github.com>
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.. testcode::
doctest for .rst files (#1511) * add doctest to circleci * Revert "add doctest to circleci" This reverts commit c45b34ea911a81f87989f6c3a832b1e8d8c471c6. * Revert "Revert "add doctest to circleci"" This reverts commit 41fca97fdcfe1cf4f6bdb3bbba75d25fa3b11f70. * doctest docs rst files * Revert "doctest docs rst files" This reverts commit b4a2e83e3da5ed1909de500ec14b6b614527c07f. * doctest only rst * doctest debugging.rst * doctest apex * doctest callbacks * doctest early stopping * doctest for child modules * doctest experiment reporting * indentation * doctest fast training * doctest for hyperparams * doctests for lr_finder * doctests multi-gpu * more doctest * make doctest drone * fix label build error * update fast training * update invalid imports * fix problem with int device count * rebase stuff * wip * wip * wip * intro guide * add missing code block * circleci * logger import for doctest * test if doctest runs on drone * fix mnist download * also run install deps for building docs * install cmake * try sudo * hide output * try pip stuff * try to mock horovod * Tranfer -> Transfer * add torchvision to extras * revert pip stuff * mlflow file location * do not mock torch * torchvision * drone extra req. * try higher sphinx version * Revert "try higher sphinx version" This reverts commit 490ac28e46d6fd52352640dfdf0d765befa56988. * try coverage command * try coverage command * try undoc flag * newline * undo drone * report coverage * review Co-authored-by: Jirka Borovec <Borda@users.noreply.github.com> * remove torchvision from extras * skip tests only if torchvision not available * fix testoutput torchvision Co-authored-by: Jirka Borovec <Borda@users.noreply.github.com>
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class LitMNIST(LightningModule):
doctest for .rst files (#1511) * add doctest to circleci * Revert "add doctest to circleci" This reverts commit c45b34ea911a81f87989f6c3a832b1e8d8c471c6. * Revert "Revert "add doctest to circleci"" This reverts commit 41fca97fdcfe1cf4f6bdb3bbba75d25fa3b11f70. * doctest docs rst files * Revert "doctest docs rst files" This reverts commit b4a2e83e3da5ed1909de500ec14b6b614527c07f. * doctest only rst * doctest debugging.rst * doctest apex * doctest callbacks * doctest early stopping * doctest for child modules * doctest experiment reporting * indentation * doctest fast training * doctest for hyperparams * doctests for lr_finder * doctests multi-gpu * more doctest * make doctest drone * fix label build error * update fast training * update invalid imports * fix problem with int device count * rebase stuff * wip * wip * wip * intro guide * add missing code block * circleci * logger import for doctest * test if doctest runs on drone * fix mnist download * also run install deps for building docs * install cmake * try sudo * hide output * try pip stuff * try to mock horovod * Tranfer -> Transfer * add torchvision to extras * revert pip stuff * mlflow file location * do not mock torch * torchvision * drone extra req. * try higher sphinx version * Revert "try higher sphinx version" This reverts commit 490ac28e46d6fd52352640dfdf0d765befa56988. * try coverage command * try coverage command * try undoc flag * newline * undo drone * report coverage * review Co-authored-by: Jirka Borovec <Borda@users.noreply.github.com> * remove torchvision from extras * skip tests only if torchvision not available * fix testoutput torchvision Co-authored-by: Jirka Borovec <Borda@users.noreply.github.com>
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def configure_optimizers(self):
return Adam(self.parameters(), lr=1e-3)
.. note:: The LightningModule itself has the parameters, so pass in self.parameters()
However, if you have multiple optimizers use the matching parameters
doctest for .rst files (#1511) * add doctest to circleci * Revert "add doctest to circleci" This reverts commit c45b34ea911a81f87989f6c3a832b1e8d8c471c6. * Revert "Revert "add doctest to circleci"" This reverts commit 41fca97fdcfe1cf4f6bdb3bbba75d25fa3b11f70. * doctest docs rst files * Revert "doctest docs rst files" This reverts commit b4a2e83e3da5ed1909de500ec14b6b614527c07f. * doctest only rst * doctest debugging.rst * doctest apex * doctest callbacks * doctest early stopping * doctest for child modules * doctest experiment reporting * indentation * doctest fast training * doctest for hyperparams * doctests for lr_finder * doctests multi-gpu * more doctest * make doctest drone * fix label build error * update fast training * update invalid imports * fix problem with int device count * rebase stuff * wip * wip * wip * intro guide * add missing code block * circleci * logger import for doctest * test if doctest runs on drone * fix mnist download * also run install deps for building docs * install cmake * try sudo * hide output * try pip stuff * try to mock horovod * Tranfer -> Transfer * add torchvision to extras * revert pip stuff * mlflow file location * do not mock torch * torchvision * drone extra req. * try higher sphinx version * Revert "try higher sphinx version" This reverts commit 490ac28e46d6fd52352640dfdf0d765befa56988. * try coverage command * try coverage command * try undoc flag * newline * undo drone * report coverage * review Co-authored-by: Jirka Borovec <Borda@users.noreply.github.com> * remove torchvision from extras * skip tests only if torchvision not available * fix testoutput torchvision Co-authored-by: Jirka Borovec <Borda@users.noreply.github.com>
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.. testcode::
doctest for .rst files (#1511) * add doctest to circleci * Revert "add doctest to circleci" This reverts commit c45b34ea911a81f87989f6c3a832b1e8d8c471c6. * Revert "Revert "add doctest to circleci"" This reverts commit 41fca97fdcfe1cf4f6bdb3bbba75d25fa3b11f70. * doctest docs rst files * Revert "doctest docs rst files" This reverts commit b4a2e83e3da5ed1909de500ec14b6b614527c07f. * doctest only rst * doctest debugging.rst * doctest apex * doctest callbacks * doctest early stopping * doctest for child modules * doctest experiment reporting * indentation * doctest fast training * doctest for hyperparams * doctests for lr_finder * doctests multi-gpu * more doctest * make doctest drone * fix label build error * update fast training * update invalid imports * fix problem with int device count * rebase stuff * wip * wip * wip * intro guide * add missing code block * circleci * logger import for doctest * test if doctest runs on drone * fix mnist download * also run install deps for building docs * install cmake * try sudo * hide output * try pip stuff * try to mock horovod * Tranfer -> Transfer * add torchvision to extras * revert pip stuff * mlflow file location * do not mock torch * torchvision * drone extra req. * try higher sphinx version * Revert "try higher sphinx version" This reverts commit 490ac28e46d6fd52352640dfdf0d765befa56988. * try coverage command * try coverage command * try undoc flag * newline * undo drone * report coverage * review Co-authored-by: Jirka Borovec <Borda@users.noreply.github.com> * remove torchvision from extras * skip tests only if torchvision not available * fix testoutput torchvision Co-authored-by: Jirka Borovec <Borda@users.noreply.github.com>
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class LitMNIST(LightningModule):
def configure_optimizers(self):
return Adam(self.generator(), lr=1e-3), Adam(self.discriminator(), lr=1e-3)
Training step
-------------
The training step is what happens inside the training loop.
.. code-block:: python
for epoch in epochs:
for batch in data:
# TRAINING STEP
# ....
# TRAINING STEP
loss.backward()
optimizer.step()
optimizer.zero_grad()
In the case of MNIST we do the following
.. code-block:: python
for epoch in epochs:
for batch in data:
# ------ TRAINING STEP START ------
x, y = batch
logits = model(x)
loss = F.nll_loss(logits, y)
# ------ TRAINING STEP END ------
loss.backward()
optimizer.step()
optimizer.zero_grad()
In Lightning, everything that is in the training step gets organized under the `training_step` function
in the LightningModule
doctest for .rst files (#1511) * add doctest to circleci * Revert "add doctest to circleci" This reverts commit c45b34ea911a81f87989f6c3a832b1e8d8c471c6. * Revert "Revert "add doctest to circleci"" This reverts commit 41fca97fdcfe1cf4f6bdb3bbba75d25fa3b11f70. * doctest docs rst files * Revert "doctest docs rst files" This reverts commit b4a2e83e3da5ed1909de500ec14b6b614527c07f. * doctest only rst * doctest debugging.rst * doctest apex * doctest callbacks * doctest early stopping * doctest for child modules * doctest experiment reporting * indentation * doctest fast training * doctest for hyperparams * doctests for lr_finder * doctests multi-gpu * more doctest * make doctest drone * fix label build error * update fast training * update invalid imports * fix problem with int device count * rebase stuff * wip * wip * wip * intro guide * add missing code block * circleci * logger import for doctest * test if doctest runs on drone * fix mnist download * also run install deps for building docs * install cmake * try sudo * hide output * try pip stuff * try to mock horovod * Tranfer -> Transfer * add torchvision to extras * revert pip stuff * mlflow file location * do not mock torch * torchvision * drone extra req. * try higher sphinx version * Revert "try higher sphinx version" This reverts commit 490ac28e46d6fd52352640dfdf0d765befa56988. * try coverage command * try coverage command * try undoc flag * newline * undo drone * report coverage * review Co-authored-by: Jirka Borovec <Borda@users.noreply.github.com> * remove torchvision from extras * skip tests only if torchvision not available * fix testoutput torchvision Co-authored-by: Jirka Borovec <Borda@users.noreply.github.com>
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.. testcode::
doctest for .rst files (#1511) * add doctest to circleci * Revert "add doctest to circleci" This reverts commit c45b34ea911a81f87989f6c3a832b1e8d8c471c6. * Revert "Revert "add doctest to circleci"" This reverts commit 41fca97fdcfe1cf4f6bdb3bbba75d25fa3b11f70. * doctest docs rst files * Revert "doctest docs rst files" This reverts commit b4a2e83e3da5ed1909de500ec14b6b614527c07f. * doctest only rst * doctest debugging.rst * doctest apex * doctest callbacks * doctest early stopping * doctest for child modules * doctest experiment reporting * indentation * doctest fast training * doctest for hyperparams * doctests for lr_finder * doctests multi-gpu * more doctest * make doctest drone * fix label build error * update fast training * update invalid imports * fix problem with int device count * rebase stuff * wip * wip * wip * intro guide * add missing code block * circleci * logger import for doctest * test if doctest runs on drone * fix mnist download * also run install deps for building docs * install cmake * try sudo * hide output * try pip stuff * try to mock horovod * Tranfer -> Transfer * add torchvision to extras * revert pip stuff * mlflow file location * do not mock torch * torchvision * drone extra req. * try higher sphinx version * Revert "try higher sphinx version" This reverts commit 490ac28e46d6fd52352640dfdf0d765befa56988. * try coverage command * try coverage command * try undoc flag * newline * undo drone * report coverage * review Co-authored-by: Jirka Borovec <Borda@users.noreply.github.com> * remove torchvision from extras * skip tests only if torchvision not available * fix testoutput torchvision Co-authored-by: Jirka Borovec <Borda@users.noreply.github.com>
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class LitMNIST(LightningModule):
doctest for .rst files (#1511) * add doctest to circleci * Revert "add doctest to circleci" This reverts commit c45b34ea911a81f87989f6c3a832b1e8d8c471c6. * Revert "Revert "add doctest to circleci"" This reverts commit 41fca97fdcfe1cf4f6bdb3bbba75d25fa3b11f70. * doctest docs rst files * Revert "doctest docs rst files" This reverts commit b4a2e83e3da5ed1909de500ec14b6b614527c07f. * doctest only rst * doctest debugging.rst * doctest apex * doctest callbacks * doctest early stopping * doctest for child modules * doctest experiment reporting * indentation * doctest fast training * doctest for hyperparams * doctests for lr_finder * doctests multi-gpu * more doctest * make doctest drone * fix label build error * update fast training * update invalid imports * fix problem with int device count * rebase stuff * wip * wip * wip * intro guide * add missing code block * circleci * logger import for doctest * test if doctest runs on drone * fix mnist download * also run install deps for building docs * install cmake * try sudo * hide output * try pip stuff * try to mock horovod * Tranfer -> Transfer * add torchvision to extras * revert pip stuff * mlflow file location * do not mock torch * torchvision * drone extra req. * try higher sphinx version * Revert "try higher sphinx version" This reverts commit 490ac28e46d6fd52352640dfdf0d765befa56988. * try coverage command * try coverage command * try undoc flag * newline * undo drone * report coverage * review Co-authored-by: Jirka Borovec <Borda@users.noreply.github.com> * remove torchvision from extras * skip tests only if torchvision not available * fix testoutput torchvision Co-authored-by: Jirka Borovec <Borda@users.noreply.github.com>
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def training_step(self, batch, batch_idx):
x, y = batch
logits = self(x)
loss = F.nll_loss(logits, y)
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return loss
Again, this is the same PyTorch code except that it has been organized by the LightningModule.
This code is not restricted which means it can be as complicated as a full seq-2-seq, RL loop, GAN, etc...
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TrainResult
^^^^^^^^^^^
Whenever you'd like to log, or sync values across GPUs use `TrainResult`.
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- log to Tensorboard or the other logger of your choice.
- log to the progress-bar.
- log on every step.
- log aggregate epoch metrics.
- average values across GPUs/TPU cores
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.. code-block:: python
def training_step(...):
return loss
# equivalent
return pl.TrainResult(loss)
# log a metric
result = pl.TrainResult(loss)
result.log('train_loss', loss)
# equivalent
result.log('train_loss', loss, on_step=True, on_epoch=False, prog_bar=False, logger=True, reduce_fx=torch.mean)
When training across accelerators (GPUs/TPUs) you can sync a metric if needed.
.. code-block:: python
# sync across GPUs / TPUs, etc...
result.log('train_loss', loss, sync_dist=True)
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If you are only using a training_loop (`training_step`) without a
validation or test loop (`validation_step`, `test_step`), you can still use EarlyStopping or automatic checkpointing
.. code-block:: python
result = pl.TrainResult(loss, checkpoint_on=loss, early_stop_on=loss)
return result
----------------
The engineering
===============
Training
--------
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So far we defined 4 key ingredients in pure PyTorch but organized the code with the LightningModule.
1. Model.
2. Training data.
3. Optimizer.
4. What happens in the training loop.
|
For clarity, we'll recall that the full LightningModule now looks like this.
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.. code-block:: python
doctest for .rst files (#1511) * add doctest to circleci * Revert "add doctest to circleci" This reverts commit c45b34ea911a81f87989f6c3a832b1e8d8c471c6. * Revert "Revert "add doctest to circleci"" This reverts commit 41fca97fdcfe1cf4f6bdb3bbba75d25fa3b11f70. * doctest docs rst files * Revert "doctest docs rst files" This reverts commit b4a2e83e3da5ed1909de500ec14b6b614527c07f. * doctest only rst * doctest debugging.rst * doctest apex * doctest callbacks * doctest early stopping * doctest for child modules * doctest experiment reporting * indentation * doctest fast training * doctest for hyperparams * doctests for lr_finder * doctests multi-gpu * more doctest * make doctest drone * fix label build error * update fast training * update invalid imports * fix problem with int device count * rebase stuff * wip * wip * wip * intro guide * add missing code block * circleci * logger import for doctest * test if doctest runs on drone * fix mnist download * also run install deps for building docs * install cmake * try sudo * hide output * try pip stuff * try to mock horovod * Tranfer -> Transfer * add torchvision to extras * revert pip stuff * mlflow file location * do not mock torch * torchvision * drone extra req. * try higher sphinx version * Revert "try higher sphinx version" This reverts commit 490ac28e46d6fd52352640dfdf0d765befa56988. * try coverage command * try coverage command * try undoc flag * newline * undo drone * report coverage * review Co-authored-by: Jirka Borovec <Borda@users.noreply.github.com> * remove torchvision from extras * skip tests only if torchvision not available * fix testoutput torchvision Co-authored-by: Jirka Borovec <Borda@users.noreply.github.com>
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class LitMNIST(LightningModule):
def __init__(self):
super().__init__()
self.layer_1 = torch.nn.Linear(28 * 28, 128)
self.layer_2 = torch.nn.Linear(128, 256)
self.layer_3 = torch.nn.Linear(256, 10)
def forward(self, x):
batch_size, channels, width, height = x.size()
x = x.view(batch_size, -1)
x = self.layer_1(x)
x = torch.relu(x)
x = self.layer_2(x)
x = torch.relu(x)
x = self.layer_3(x)
x = torch.log_softmax(x, dim=1)
return x
def training_step(self, batch, batch_idx):
x, y = batch
logits = self(x)
loss = F.nll_loss(logits, y)
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# using TrainResult to enable logging
result = pl.TrainResult(loss)
result.log('train_loss', loss)
return result
Again, this is the same PyTorch code, except that it's organized by the LightningModule.
Auto Logging
^^^^^^^^^^^^
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When we added the `TrainResult` in the return dictionary it went into the built-in tensorboard logger.
But you could have also logged by calling:
.. code-block:: python
def training_step(self, batch, batch_idx):
# ...
loss = ...
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self.logger.summary.scalar('loss', loss, step=self.global_step)
# equivalent
result = TrainResult()
result.log('loss', loss)
Which will generate automatic tensorboard logs.
.. figure:: /_images/mnist_imgs/mnist_tb.png
:alt: mnist CPU bar
:width: 500
|
But you can also use any of the `number of other loggers <loggers.rst>`_ we support.
Train on CPU
^^^^^^^^^^^^
.. code-block:: python
from pytorch_lightning import Trainer
model = LitMNIST()
trainer = Trainer()
trainer.fit(model, train_loader)
You should see the following weights summary and progress bar
.. figure:: /_images/mnist_imgs/mnist_cpu_bar.png
:alt: mnist CPU bar
Train on GPU
^^^^^^^^^^^^
But the beauty is all the magic you can do with the trainer flags. For instance, to run this model on a GPU:
.. code-block:: python
model = LitMNIST()
trainer = Trainer(gpus=1)
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trainer.fit(model, train_loader)
.. figure:: /_images/mnist_imgs/mnist_gpu.png
:alt: mnist GPU bar
Train on Multi-GPU
^^^^^^^^^^^^^^^^^^
Or you can also train on multiple GPUs.
.. code-block:: python
model = LitMNIST()
trainer = Trainer(gpus=8)
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trainer.fit(model, train_loader)
Or multiple nodes
.. code-block:: python
# (32 GPUs)
model = LitMNIST()
trainer = Trainer(gpus=8, num_nodes=4, distributed_backend='ddp')
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trainer.fit(model, train_loader)
Refer to the `distributed computing guide for more details <https://pytorch-lightning.readthedocs.io/en/stable/multi_gpu.html>`_.
train on TPUs
^^^^^^^^^^^^^
Did you know you can use PyTorch on TPUs? It's very hard to do, but we've
worked with the xla team to use their awesome library to get this to work
out of the box!
Let's train on Colab (`full demo available here <https://colab.research.google.com/drive/1-_LKx4HwAxl5M6xPJmqAAu444LTDQoa3>`_)
First, change the runtime to TPU (and reinstall lightning).
.. figure:: /_images/mnist_imgs/runtime_tpu.png
:alt: mnist GPU bar
:width: 400
.. figure:: /_images/mnist_imgs/restart_runtime.png
:alt: mnist GPU bar
:width: 400
|
Next, install the required xla library (adds support for PyTorch on TPUs)
.. code-block:: shell
!curl https://raw.githubusercontent.com/pytorch/xla/master/contrib/scripts/env-setup.py -o pytorch-xla-env-setup.py
!python pytorch-xla-env-setup.py --version nightly --apt-packages libomp5 libopenblas-dev
In distributed training (multiple GPUs and multiple TPU cores) each GPU or TPU core will run a copy
of this program. This means that without taking any care you will download the dataset N times which
will cause all sorts of issues.
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To solve this problem, make sure your download code is in the `prepare_data` method in the DataModule.
In this method we do all the preparation we need to do once (instead of on every gpu).
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`prepare_data` can be called in two ways, once per node or only on the root node
(`Trainer(prepare_data_per_node=False)`).
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.. code-block:: python
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class MNISTDataModule(LightningDataModule):
def __init__(self, batch_size=64):
super().__init__()
self.batch_size = batch_size
doctest for .rst files (#1511) * add doctest to circleci * Revert "add doctest to circleci" This reverts commit c45b34ea911a81f87989f6c3a832b1e8d8c471c6. * Revert "Revert "add doctest to circleci"" This reverts commit 41fca97fdcfe1cf4f6bdb3bbba75d25fa3b11f70. * doctest docs rst files * Revert "doctest docs rst files" This reverts commit b4a2e83e3da5ed1909de500ec14b6b614527c07f. * doctest only rst * doctest debugging.rst * doctest apex * doctest callbacks * doctest early stopping * doctest for child modules * doctest experiment reporting * indentation * doctest fast training * doctest for hyperparams * doctests for lr_finder * doctests multi-gpu * more doctest * make doctest drone * fix label build error * update fast training * update invalid imports * fix problem with int device count * rebase stuff * wip * wip * wip * intro guide * add missing code block * circleci * logger import for doctest * test if doctest runs on drone * fix mnist download * also run install deps for building docs * install cmake * try sudo * hide output * try pip stuff * try to mock horovod * Tranfer -> Transfer * add torchvision to extras * revert pip stuff * mlflow file location * do not mock torch * torchvision * drone extra req. * try higher sphinx version * Revert "try higher sphinx version" This reverts commit 490ac28e46d6fd52352640dfdf0d765befa56988. * try coverage command * try coverage command * try undoc flag * newline * undo drone * report coverage * review Co-authored-by: Jirka Borovec <Borda@users.noreply.github.com> * remove torchvision from extras * skip tests only if torchvision not available * fix testoutput torchvision Co-authored-by: Jirka Borovec <Borda@users.noreply.github.com>
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def prepare_data(self):
# download only
MNIST(os.getcwd(), train=True, download=True, transform=transforms.ToTensor())
MNIST(os.getcwd(), train=False, download=True, transform=transforms.ToTensor())
def setup(self, stage):
doctest for .rst files (#1511) * add doctest to circleci * Revert "add doctest to circleci" This reverts commit c45b34ea911a81f87989f6c3a832b1e8d8c471c6. * Revert "Revert "add doctest to circleci"" This reverts commit 41fca97fdcfe1cf4f6bdb3bbba75d25fa3b11f70. * doctest docs rst files * Revert "doctest docs rst files" This reverts commit b4a2e83e3da5ed1909de500ec14b6b614527c07f. * doctest only rst * doctest debugging.rst * doctest apex * doctest callbacks * doctest early stopping * doctest for child modules * doctest experiment reporting * indentation * doctest fast training * doctest for hyperparams * doctests for lr_finder * doctests multi-gpu * more doctest * make doctest drone * fix label build error * update fast training * update invalid imports * fix problem with int device count * rebase stuff * wip * wip * wip * intro guide * add missing code block * circleci * logger import for doctest * test if doctest runs on drone * fix mnist download * also run install deps for building docs * install cmake * try sudo * hide output * try pip stuff * try to mock horovod * Tranfer -> Transfer * add torchvision to extras * revert pip stuff * mlflow file location * do not mock torch * torchvision * drone extra req. * try higher sphinx version * Revert "try higher sphinx version" This reverts commit 490ac28e46d6fd52352640dfdf0d765befa56988. * try coverage command * try coverage command * try undoc flag * newline * undo drone * report coverage * review Co-authored-by: Jirka Borovec <Borda@users.noreply.github.com> * remove torchvision from extras * skip tests only if torchvision not available * fix testoutput torchvision Co-authored-by: Jirka Borovec <Borda@users.noreply.github.com>
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# transform
transform=transforms.Compose([transforms.ToTensor()])
MNIST(os.getcwd(), train=True, download=False, transform=transform)
MNIST(os.getcwd(), train=False, download=False, transform=transform)
doctest for .rst files (#1511) * add doctest to circleci * Revert "add doctest to circleci" This reverts commit c45b34ea911a81f87989f6c3a832b1e8d8c471c6. * Revert "Revert "add doctest to circleci"" This reverts commit 41fca97fdcfe1cf4f6bdb3bbba75d25fa3b11f70. * doctest docs rst files * Revert "doctest docs rst files" This reverts commit b4a2e83e3da5ed1909de500ec14b6b614527c07f. * doctest only rst * doctest debugging.rst * doctest apex * doctest callbacks * doctest early stopping * doctest for child modules * doctest experiment reporting * indentation * doctest fast training * doctest for hyperparams * doctests for lr_finder * doctests multi-gpu * more doctest * make doctest drone * fix label build error * update fast training * update invalid imports * fix problem with int device count * rebase stuff * wip * wip * wip * intro guide * add missing code block * circleci * logger import for doctest * test if doctest runs on drone * fix mnist download * also run install deps for building docs * install cmake * try sudo * hide output * try pip stuff * try to mock horovod * Tranfer -> Transfer * add torchvision to extras * revert pip stuff * mlflow file location * do not mock torch * torchvision * drone extra req. * try higher sphinx version * Revert "try higher sphinx version" This reverts commit 490ac28e46d6fd52352640dfdf0d765befa56988. * try coverage command * try coverage command * try undoc flag * newline * undo drone * report coverage * review Co-authored-by: Jirka Borovec <Borda@users.noreply.github.com> * remove torchvision from extras * skip tests only if torchvision not available * fix testoutput torchvision Co-authored-by: Jirka Borovec <Borda@users.noreply.github.com>
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# train/val split
mnist_train, mnist_val = random_split(mnist_train, [55000, 5000])
doctest for .rst files (#1511) * add doctest to circleci * Revert "add doctest to circleci" This reverts commit c45b34ea911a81f87989f6c3a832b1e8d8c471c6. * Revert "Revert "add doctest to circleci"" This reverts commit 41fca97fdcfe1cf4f6bdb3bbba75d25fa3b11f70. * doctest docs rst files * Revert "doctest docs rst files" This reverts commit b4a2e83e3da5ed1909de500ec14b6b614527c07f. * doctest only rst * doctest debugging.rst * doctest apex * doctest callbacks * doctest early stopping * doctest for child modules * doctest experiment reporting * indentation * doctest fast training * doctest for hyperparams * doctests for lr_finder * doctests multi-gpu * more doctest * make doctest drone * fix label build error * update fast training * update invalid imports * fix problem with int device count * rebase stuff * wip * wip * wip * intro guide * add missing code block * circleci * logger import for doctest * test if doctest runs on drone * fix mnist download * also run install deps for building docs * install cmake * try sudo * hide output * try pip stuff * try to mock horovod * Tranfer -> Transfer * add torchvision to extras * revert pip stuff * mlflow file location * do not mock torch * torchvision * drone extra req. * try higher sphinx version * Revert "try higher sphinx version" This reverts commit 490ac28e46d6fd52352640dfdf0d765befa56988. * try coverage command * try coverage command * try undoc flag * newline * undo drone * report coverage * review Co-authored-by: Jirka Borovec <Borda@users.noreply.github.com> * remove torchvision from extras * skip tests only if torchvision not available * fix testoutput torchvision Co-authored-by: Jirka Borovec <Borda@users.noreply.github.com>
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# assign to use in dataloaders
self.train_dataset = mnist_train
self.val_dataset = mnist_val
self.test_dataset = mnist_test
doctest for .rst files (#1511) * add doctest to circleci * Revert "add doctest to circleci" This reverts commit c45b34ea911a81f87989f6c3a832b1e8d8c471c6. * Revert "Revert "add doctest to circleci"" This reverts commit 41fca97fdcfe1cf4f6bdb3bbba75d25fa3b11f70. * doctest docs rst files * Revert "doctest docs rst files" This reverts commit b4a2e83e3da5ed1909de500ec14b6b614527c07f. * doctest only rst * doctest debugging.rst * doctest apex * doctest callbacks * doctest early stopping * doctest for child modules * doctest experiment reporting * indentation * doctest fast training * doctest for hyperparams * doctests for lr_finder * doctests multi-gpu * more doctest * make doctest drone * fix label build error * update fast training * update invalid imports * fix problem with int device count * rebase stuff * wip * wip * wip * intro guide * add missing code block * circleci * logger import for doctest * test if doctest runs on drone * fix mnist download * also run install deps for building docs * install cmake * try sudo * hide output * try pip stuff * try to mock horovod * Tranfer -> Transfer * add torchvision to extras * revert pip stuff * mlflow file location * do not mock torch * torchvision * drone extra req. * try higher sphinx version * Revert "try higher sphinx version" This reverts commit 490ac28e46d6fd52352640dfdf0d765befa56988. * try coverage command * try coverage command * try undoc flag * newline * undo drone * report coverage * review Co-authored-by: Jirka Borovec <Borda@users.noreply.github.com> * remove torchvision from extras * skip tests only if torchvision not available * fix testoutput torchvision Co-authored-by: Jirka Borovec <Borda@users.noreply.github.com>
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def train_dataloader(self):
return DataLoader(self.train_dataset, batch_size=self.batch_size)
doctest for .rst files (#1511) * add doctest to circleci * Revert "add doctest to circleci" This reverts commit c45b34ea911a81f87989f6c3a832b1e8d8c471c6. * Revert "Revert "add doctest to circleci"" This reverts commit 41fca97fdcfe1cf4f6bdb3bbba75d25fa3b11f70. * doctest docs rst files * Revert "doctest docs rst files" This reverts commit b4a2e83e3da5ed1909de500ec14b6b614527c07f. * doctest only rst * doctest debugging.rst * doctest apex * doctest callbacks * doctest early stopping * doctest for child modules * doctest experiment reporting * indentation * doctest fast training * doctest for hyperparams * doctests for lr_finder * doctests multi-gpu * more doctest * make doctest drone * fix label build error * update fast training * update invalid imports * fix problem with int device count * rebase stuff * wip * wip * wip * intro guide * add missing code block * circleci * logger import for doctest * test if doctest runs on drone * fix mnist download * also run install deps for building docs * install cmake * try sudo * hide output * try pip stuff * try to mock horovod * Tranfer -> Transfer * add torchvision to extras * revert pip stuff * mlflow file location * do not mock torch * torchvision * drone extra req. * try higher sphinx version * Revert "try higher sphinx version" This reverts commit 490ac28e46d6fd52352640dfdf0d765befa56988. * try coverage command * try coverage command * try undoc flag * newline * undo drone * report coverage * review Co-authored-by: Jirka Borovec <Borda@users.noreply.github.com> * remove torchvision from extras * skip tests only if torchvision not available * fix testoutput torchvision Co-authored-by: Jirka Borovec <Borda@users.noreply.github.com>
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def val_dataloader(self):
return DataLoader(self.val_dataset, batch_size=self.batch_size)
doctest for .rst files (#1511) * add doctest to circleci * Revert "add doctest to circleci" This reverts commit c45b34ea911a81f87989f6c3a832b1e8d8c471c6. * Revert "Revert "add doctest to circleci"" This reverts commit 41fca97fdcfe1cf4f6bdb3bbba75d25fa3b11f70. * doctest docs rst files * Revert "doctest docs rst files" This reverts commit b4a2e83e3da5ed1909de500ec14b6b614527c07f. * doctest only rst * doctest debugging.rst * doctest apex * doctest callbacks * doctest early stopping * doctest for child modules * doctest experiment reporting * indentation * doctest fast training * doctest for hyperparams * doctests for lr_finder * doctests multi-gpu * more doctest * make doctest drone * fix label build error * update fast training * update invalid imports * fix problem with int device count * rebase stuff * wip * wip * wip * intro guide * add missing code block * circleci * logger import for doctest * test if doctest runs on drone * fix mnist download * also run install deps for building docs * install cmake * try sudo * hide output * try pip stuff * try to mock horovod * Tranfer -> Transfer * add torchvision to extras * revert pip stuff * mlflow file location * do not mock torch * torchvision * drone extra req. * try higher sphinx version * Revert "try higher sphinx version" This reverts commit 490ac28e46d6fd52352640dfdf0d765befa56988. * try coverage command * try coverage command * try undoc flag * newline * undo drone * report coverage * review Co-authored-by: Jirka Borovec <Borda@users.noreply.github.com> * remove torchvision from extras * skip tests only if torchvision not available * fix testoutput torchvision Co-authored-by: Jirka Borovec <Borda@users.noreply.github.com>
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def test_dataloader(self):
return DataLoader(self.test_dataset, batch_size=self.batch_size)
The `prepare_data` method is also a good place to do any data processing that needs to be done only
once (ie: download or tokenize, etc...).
.. note:: Lightning inserts the correct DistributedSampler for distributed training. No need to add yourself!
Now we can train the LightningModule on a TPU without doing anything else!
.. code-block:: python
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dm = MNISTDataModule()
model = LitMNIST()
trainer = Trainer(tpu_cores=8)
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trainer.fit(model, dm)
You'll now see the TPU cores booting up.
.. figure:: /_images/mnist_imgs/tpu_start.png
:alt: TPU start
:width: 400
Notice the epoch is MUCH faster!
.. figure:: /_images/mnist_imgs/tpu_fast.png
:alt: TPU speed
:width: 600
----------------
.. include:: hyperparameters.rst
----------------
Validating
----------
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For most cases, we stop training the model when the performance on a validation
split of the data reaches a minimum.
Just like the `training_step`, we can define a `validation_step` to check whatever
metrics we care about, generate samples or add more to our logs.
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Since the `validation_step` processes a single batch, use the `EvalResult` to log metrics for the full epoch.
.. code-block:: python
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def validation_step(self, batch, batch_idx):
result = pl.EvalResult(checkpoint_on=loss)
result.log('val_loss', loss)
# equivalent
result.log('val_loss', loss, prog_bar=False, logger=True, on_step=False, on_epoch=True, reduce_fx=torch.mean)
return result
Now we can train with a validation loop as well.
.. code-block:: python
from pytorch_lightning import Trainer
model = LitMNIST()
trainer = Trainer(tpu_cores=8)
trainer.fit(model, train_loader, val_loader)
You may have noticed the words `Validation sanity check` logged. This is because Lightning runs 2 batches
of validation before starting to train. This is a kind of unit test to make sure that if you have a bug
in the validation loop, you won't need to potentially wait a full epoch to find out.
.. note:: Lightning disables gradients, puts model in eval mode and does everything needed for validation.
Val loop under the hood
^^^^^^^^^^^^^^^^^^^^^^^
Under the hood, Lightning does the following:
.. code-block:: python
model = Model()
model.train()
torch.set_grad_enabled(True)
for epoch in epochs:
for batch in data:
# ...
# train
# validate
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model.eval()
torch.set_grad_enabled(False)
outputs = []
for batch in val_data:
x, y = batch # validation_step
y_hat = model(x) # validation_step
loss = loss(y_hat, x) # validation_step
outputs.append({'val_loss': loss}) # validation_step
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full_loss = outputs.mean() # validation_epoch_end
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Optional methods
^^^^^^^^^^^^^^^^
If you still need even more fine-grain control, define the other optional methods for the loop.
.. code-block:: python
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def validation_step(self, batch, batch_idx):
result = pl.EvalResult()
result.prediction = some_prediction
return result
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def validation_epoch_end(self, val_step_outputs):
# do something with all the predictions from each validation_step
all_predictions = val_step_outputs.prediction
----------------
Testing
-------
Once our research is done and we're about to publish or deploy a model, we normally want to figure out
how it will generalize in the "real world." For this, we use a held-out split of the data for testing.
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Just like the validation loop, we define a test loop
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.. code-block:: python
doctest for .rst files (#1511) * add doctest to circleci * Revert "add doctest to circleci" This reverts commit c45b34ea911a81f87989f6c3a832b1e8d8c471c6. * Revert "Revert "add doctest to circleci"" This reverts commit 41fca97fdcfe1cf4f6bdb3bbba75d25fa3b11f70. * doctest docs rst files * Revert "doctest docs rst files" This reverts commit b4a2e83e3da5ed1909de500ec14b6b614527c07f. * doctest only rst * doctest debugging.rst * doctest apex * doctest callbacks * doctest early stopping * doctest for child modules * doctest experiment reporting * indentation * doctest fast training * doctest for hyperparams * doctests for lr_finder * doctests multi-gpu * more doctest * make doctest drone * fix label build error * update fast training * update invalid imports * fix problem with int device count * rebase stuff * wip * wip * wip * intro guide * add missing code block * circleci * logger import for doctest * test if doctest runs on drone * fix mnist download * also run install deps for building docs * install cmake * try sudo * hide output * try pip stuff * try to mock horovod * Tranfer -> Transfer * add torchvision to extras * revert pip stuff * mlflow file location * do not mock torch * torchvision * drone extra req. * try higher sphinx version * Revert "try higher sphinx version" This reverts commit 490ac28e46d6fd52352640dfdf0d765befa56988. * try coverage command * try coverage command * try undoc flag * newline * undo drone * report coverage * review Co-authored-by: Jirka Borovec <Borda@users.noreply.github.com> * remove torchvision from extras * skip tests only if torchvision not available * fix testoutput torchvision Co-authored-by: Jirka Borovec <Borda@users.noreply.github.com>
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class LitMNIST(LightningModule):
def test_step(self, batch, batch_idx):
x, y = batch
logits = self(x)
loss = F.nll_loss(logits, y)
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result = pl.EvalResult()
result.log('test_loss', loss)
return result
doctest for .rst files (#1511) * add doctest to circleci * Revert "add doctest to circleci" This reverts commit c45b34ea911a81f87989f6c3a832b1e8d8c471c6. * Revert "Revert "add doctest to circleci"" This reverts commit 41fca97fdcfe1cf4f6bdb3bbba75d25fa3b11f70. * doctest docs rst files * Revert "doctest docs rst files" This reverts commit b4a2e83e3da5ed1909de500ec14b6b614527c07f. * doctest only rst * doctest debugging.rst * doctest apex * doctest callbacks * doctest early stopping * doctest for child modules * doctest experiment reporting * indentation * doctest fast training * doctest for hyperparams * doctests for lr_finder * doctests multi-gpu * more doctest * make doctest drone * fix label build error * update fast training * update invalid imports * fix problem with int device count * rebase stuff * wip * wip * wip * intro guide * add missing code block * circleci * logger import for doctest * test if doctest runs on drone * fix mnist download * also run install deps for building docs * install cmake * try sudo * hide output * try pip stuff * try to mock horovod * Tranfer -> Transfer * add torchvision to extras * revert pip stuff * mlflow file location * do not mock torch * torchvision * drone extra req. * try higher sphinx version * Revert "try higher sphinx version" This reverts commit 490ac28e46d6fd52352640dfdf0d765befa56988. * try coverage command * try coverage command * try undoc flag * newline * undo drone * report coverage * review Co-authored-by: Jirka Borovec <Borda@users.noreply.github.com> * remove torchvision from extras * skip tests only if torchvision not available * fix testoutput torchvision Co-authored-by: Jirka Borovec <Borda@users.noreply.github.com>
2020-05-05 02:16:54 +00:00
However, to make sure the test set isn't used inadvertently, Lightning has a separate API to run tests.
Once you train your model simply call `.test()`.
.. code-block:: python
from pytorch_lightning import Trainer
model = LitMNIST()
trainer = Trainer(tpu_cores=8)
trainer.fit(model)
# run test set
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result = trainer.test()
print(result)
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.. rst-class:: sphx-glr-script-out
Out:
.. code-block:: none
--------------------------------------------------------------
TEST RESULTS
{'test_loss': tensor(1.1703, device='cuda:0')}
--------------------------------------------------------------
You can also run the test from a saved lightning model
.. code-block:: python
model = LitMNIST.load_from_checkpoint(PATH)
trainer = Trainer(tpu_cores=8)
trainer.test(model)
.. note:: Lightning disables gradients, puts model in eval mode and does everything needed for testing.
.. warning:: .test() is not stable yet on TPUs. We're working on getting around the multiprocessing challenges.
----------------
Predicting
----------
Again, a LightningModule is exactly the same as a PyTorch module. This means you can load it
and use it for prediction.
.. code-block:: python
model = LitMNIST.load_from_checkpoint(PATH)
x = torch.Tensor(1, 1, 28, 28)
out = model(x)
On the surface, it looks like `forward` and `training_step` are similar. Generally, we want to make sure that
what we want the model to do is what happens in the `forward`. whereas the `training_step` likely calls forward from
within it.
doctest for .rst files (#1511) * add doctest to circleci * Revert "add doctest to circleci" This reverts commit c45b34ea911a81f87989f6c3a832b1e8d8c471c6. * Revert "Revert "add doctest to circleci"" This reverts commit 41fca97fdcfe1cf4f6bdb3bbba75d25fa3b11f70. * doctest docs rst files * Revert "doctest docs rst files" This reverts commit b4a2e83e3da5ed1909de500ec14b6b614527c07f. * doctest only rst * doctest debugging.rst * doctest apex * doctest callbacks * doctest early stopping * doctest for child modules * doctest experiment reporting * indentation * doctest fast training * doctest for hyperparams * doctests for lr_finder * doctests multi-gpu * more doctest * make doctest drone * fix label build error * update fast training * update invalid imports * fix problem with int device count * rebase stuff * wip * wip * wip * intro guide * add missing code block * circleci * logger import for doctest * test if doctest runs on drone * fix mnist download * also run install deps for building docs * install cmake * try sudo * hide output * try pip stuff * try to mock horovod * Tranfer -> Transfer * add torchvision to extras * revert pip stuff * mlflow file location * do not mock torch * torchvision * drone extra req. * try higher sphinx version * Revert "try higher sphinx version" This reverts commit 490ac28e46d6fd52352640dfdf0d765befa56988. * try coverage command * try coverage command * try undoc flag * newline * undo drone * report coverage * review Co-authored-by: Jirka Borovec <Borda@users.noreply.github.com> * remove torchvision from extras * skip tests only if torchvision not available * fix testoutput torchvision Co-authored-by: Jirka Borovec <Borda@users.noreply.github.com>
2020-05-05 02:16:54 +00:00
.. testcode::
doctest for .rst files (#1511) * add doctest to circleci * Revert "add doctest to circleci" This reverts commit c45b34ea911a81f87989f6c3a832b1e8d8c471c6. * Revert "Revert "add doctest to circleci"" This reverts commit 41fca97fdcfe1cf4f6bdb3bbba75d25fa3b11f70. * doctest docs rst files * Revert "doctest docs rst files" This reverts commit b4a2e83e3da5ed1909de500ec14b6b614527c07f. * doctest only rst * doctest debugging.rst * doctest apex * doctest callbacks * doctest early stopping * doctest for child modules * doctest experiment reporting * indentation * doctest fast training * doctest for hyperparams * doctests for lr_finder * doctests multi-gpu * more doctest * make doctest drone * fix label build error * update fast training * update invalid imports * fix problem with int device count * rebase stuff * wip * wip * wip * intro guide * add missing code block * circleci * logger import for doctest * test if doctest runs on drone * fix mnist download * also run install deps for building docs * install cmake * try sudo * hide output * try pip stuff * try to mock horovod * Tranfer -> Transfer * add torchvision to extras * revert pip stuff * mlflow file location * do not mock torch * torchvision * drone extra req. * try higher sphinx version * Revert "try higher sphinx version" This reverts commit 490ac28e46d6fd52352640dfdf0d765befa56988. * try coverage command * try coverage command * try undoc flag * newline * undo drone * report coverage * review Co-authored-by: Jirka Borovec <Borda@users.noreply.github.com> * remove torchvision from extras * skip tests only if torchvision not available * fix testoutput torchvision Co-authored-by: Jirka Borovec <Borda@users.noreply.github.com>
2020-05-05 02:16:54 +00:00
class MNISTClassifier(LightningModule):
doctest for .rst files (#1511) * add doctest to circleci * Revert "add doctest to circleci" This reverts commit c45b34ea911a81f87989f6c3a832b1e8d8c471c6. * Revert "Revert "add doctest to circleci"" This reverts commit 41fca97fdcfe1cf4f6bdb3bbba75d25fa3b11f70. * doctest docs rst files * Revert "doctest docs rst files" This reverts commit b4a2e83e3da5ed1909de500ec14b6b614527c07f. * doctest only rst * doctest debugging.rst * doctest apex * doctest callbacks * doctest early stopping * doctest for child modules * doctest experiment reporting * indentation * doctest fast training * doctest for hyperparams * doctests for lr_finder * doctests multi-gpu * more doctest * make doctest drone * fix label build error * update fast training * update invalid imports * fix problem with int device count * rebase stuff * wip * wip * wip * intro guide * add missing code block * circleci * logger import for doctest * test if doctest runs on drone * fix mnist download * also run install deps for building docs * install cmake * try sudo * hide output * try pip stuff * try to mock horovod * Tranfer -> Transfer * add torchvision to extras * revert pip stuff * mlflow file location * do not mock torch * torchvision * drone extra req. * try higher sphinx version * Revert "try higher sphinx version" This reverts commit 490ac28e46d6fd52352640dfdf0d765befa56988. * try coverage command * try coverage command * try undoc flag * newline * undo drone * report coverage * review Co-authored-by: Jirka Borovec <Borda@users.noreply.github.com> * remove torchvision from extras * skip tests only if torchvision not available * fix testoutput torchvision Co-authored-by: Jirka Borovec <Borda@users.noreply.github.com>
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def forward(self, x):
batch_size, channels, width, height = x.size()
x = x.view(batch_size, -1)
x = self.layer_1(x)
x = torch.relu(x)
x = self.layer_2(x)
x = torch.relu(x)
x = self.layer_3(x)
x = torch.log_softmax(x, dim=1)
return x
doctest for .rst files (#1511) * add doctest to circleci * Revert "add doctest to circleci" This reverts commit c45b34ea911a81f87989f6c3a832b1e8d8c471c6. * Revert "Revert "add doctest to circleci"" This reverts commit 41fca97fdcfe1cf4f6bdb3bbba75d25fa3b11f70. * doctest docs rst files * Revert "doctest docs rst files" This reverts commit b4a2e83e3da5ed1909de500ec14b6b614527c07f. * doctest only rst * doctest debugging.rst * doctest apex * doctest callbacks * doctest early stopping * doctest for child modules * doctest experiment reporting * indentation * doctest fast training * doctest for hyperparams * doctests for lr_finder * doctests multi-gpu * more doctest * make doctest drone * fix label build error * update fast training * update invalid imports * fix problem with int device count * rebase stuff * wip * wip * wip * intro guide * add missing code block * circleci * logger import for doctest * test if doctest runs on drone * fix mnist download * also run install deps for building docs * install cmake * try sudo * hide output * try pip stuff * try to mock horovod * Tranfer -> Transfer * add torchvision to extras * revert pip stuff * mlflow file location * do not mock torch * torchvision * drone extra req. * try higher sphinx version * Revert "try higher sphinx version" This reverts commit 490ac28e46d6fd52352640dfdf0d765befa56988. * try coverage command * try coverage command * try undoc flag * newline * undo drone * report coverage * review Co-authored-by: Jirka Borovec <Borda@users.noreply.github.com> * remove torchvision from extras * skip tests only if torchvision not available * fix testoutput torchvision Co-authored-by: Jirka Borovec <Borda@users.noreply.github.com>
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def training_step(self, batch, batch_idx):
x, y = batch
logits = self(x)
loss = F.nll_loss(logits, y)
return loss
.. code-block:: python
model = MNISTClassifier()
x = mnist_image()
logits = model(x)
In this case, we've set this LightningModel to predict logits. But we could also have it predict feature maps:
doctest for .rst files (#1511) * add doctest to circleci * Revert "add doctest to circleci" This reverts commit c45b34ea911a81f87989f6c3a832b1e8d8c471c6. * Revert "Revert "add doctest to circleci"" This reverts commit 41fca97fdcfe1cf4f6bdb3bbba75d25fa3b11f70. * doctest docs rst files * Revert "doctest docs rst files" This reverts commit b4a2e83e3da5ed1909de500ec14b6b614527c07f. * doctest only rst * doctest debugging.rst * doctest apex * doctest callbacks * doctest early stopping * doctest for child modules * doctest experiment reporting * indentation * doctest fast training * doctest for hyperparams * doctests for lr_finder * doctests multi-gpu * more doctest * make doctest drone * fix label build error * update fast training * update invalid imports * fix problem with int device count * rebase stuff * wip * wip * wip * intro guide * add missing code block * circleci * logger import for doctest * test if doctest runs on drone * fix mnist download * also run install deps for building docs * install cmake * try sudo * hide output * try pip stuff * try to mock horovod * Tranfer -> Transfer * add torchvision to extras * revert pip stuff * mlflow file location * do not mock torch * torchvision * drone extra req. * try higher sphinx version * Revert "try higher sphinx version" This reverts commit 490ac28e46d6fd52352640dfdf0d765befa56988. * try coverage command * try coverage command * try undoc flag * newline * undo drone * report coverage * review Co-authored-by: Jirka Borovec <Borda@users.noreply.github.com> * remove torchvision from extras * skip tests only if torchvision not available * fix testoutput torchvision Co-authored-by: Jirka Borovec <Borda@users.noreply.github.com>
2020-05-05 02:16:54 +00:00
.. testcode::
doctest for .rst files (#1511) * add doctest to circleci * Revert "add doctest to circleci" This reverts commit c45b34ea911a81f87989f6c3a832b1e8d8c471c6. * Revert "Revert "add doctest to circleci"" This reverts commit 41fca97fdcfe1cf4f6bdb3bbba75d25fa3b11f70. * doctest docs rst files * Revert "doctest docs rst files" This reverts commit b4a2e83e3da5ed1909de500ec14b6b614527c07f. * doctest only rst * doctest debugging.rst * doctest apex * doctest callbacks * doctest early stopping * doctest for child modules * doctest experiment reporting * indentation * doctest fast training * doctest for hyperparams * doctests for lr_finder * doctests multi-gpu * more doctest * make doctest drone * fix label build error * update fast training * update invalid imports * fix problem with int device count * rebase stuff * wip * wip * wip * intro guide * add missing code block * circleci * logger import for doctest * test if doctest runs on drone * fix mnist download * also run install deps for building docs * install cmake * try sudo * hide output * try pip stuff * try to mock horovod * Tranfer -> Transfer * add torchvision to extras * revert pip stuff * mlflow file location * do not mock torch * torchvision * drone extra req. * try higher sphinx version * Revert "try higher sphinx version" This reverts commit 490ac28e46d6fd52352640dfdf0d765befa56988. * try coverage command * try coverage command * try undoc flag * newline * undo drone * report coverage * review Co-authored-by: Jirka Borovec <Borda@users.noreply.github.com> * remove torchvision from extras * skip tests only if torchvision not available * fix testoutput torchvision Co-authored-by: Jirka Borovec <Borda@users.noreply.github.com>
2020-05-05 02:16:54 +00:00
class MNISTRepresentator(LightningModule):
doctest for .rst files (#1511) * add doctest to circleci * Revert "add doctest to circleci" This reverts commit c45b34ea911a81f87989f6c3a832b1e8d8c471c6. * Revert "Revert "add doctest to circleci"" This reverts commit 41fca97fdcfe1cf4f6bdb3bbba75d25fa3b11f70. * doctest docs rst files * Revert "doctest docs rst files" This reverts commit b4a2e83e3da5ed1909de500ec14b6b614527c07f. * doctest only rst * doctest debugging.rst * doctest apex * doctest callbacks * doctest early stopping * doctest for child modules * doctest experiment reporting * indentation * doctest fast training * doctest for hyperparams * doctests for lr_finder * doctests multi-gpu * more doctest * make doctest drone * fix label build error * update fast training * update invalid imports * fix problem with int device count * rebase stuff * wip * wip * wip * intro guide * add missing code block * circleci * logger import for doctest * test if doctest runs on drone * fix mnist download * also run install deps for building docs * install cmake * try sudo * hide output * try pip stuff * try to mock horovod * Tranfer -> Transfer * add torchvision to extras * revert pip stuff * mlflow file location * do not mock torch * torchvision * drone extra req. * try higher sphinx version * Revert "try higher sphinx version" This reverts commit 490ac28e46d6fd52352640dfdf0d765befa56988. * try coverage command * try coverage command * try undoc flag * newline * undo drone * report coverage * review Co-authored-by: Jirka Borovec <Borda@users.noreply.github.com> * remove torchvision from extras * skip tests only if torchvision not available * fix testoutput torchvision Co-authored-by: Jirka Borovec <Borda@users.noreply.github.com>
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def forward(self, x):
batch_size, channels, width, height = x.size()
x = x.view(batch_size, -1)
x = self.layer_1(x)
x1 = torch.relu(x)
x = self.layer_2(x1)
x2 = torch.relu(x)
x3 = self.layer_3(x2)
return [x, x1, x2, x3]
def training_step(self, batch, batch_idx):
x, y = batch
out, l1_feats, l2_feats, l3_feats = self(x)
logits = torch.log_softmax(out, dim=1)
ce_loss = F.nll_loss(logits, y)
loss = perceptual_loss(l1_feats, l2_feats, l3_feats) + ce_loss
return loss
.. code-block:: python
model = MNISTRepresentator.load_from_checkpoint(PATH)
x = mnist_image()
feature_maps = model(x)
Or maybe we have a model that we use to do generation
doctest for .rst files (#1511) * add doctest to circleci * Revert "add doctest to circleci" This reverts commit c45b34ea911a81f87989f6c3a832b1e8d8c471c6. * Revert "Revert "add doctest to circleci"" This reverts commit 41fca97fdcfe1cf4f6bdb3bbba75d25fa3b11f70. * doctest docs rst files * Revert "doctest docs rst files" This reverts commit b4a2e83e3da5ed1909de500ec14b6b614527c07f. * doctest only rst * doctest debugging.rst * doctest apex * doctest callbacks * doctest early stopping * doctest for child modules * doctest experiment reporting * indentation * doctest fast training * doctest for hyperparams * doctests for lr_finder * doctests multi-gpu * more doctest * make doctest drone * fix label build error * update fast training * update invalid imports * fix problem with int device count * rebase stuff * wip * wip * wip * intro guide * add missing code block * circleci * logger import for doctest * test if doctest runs on drone * fix mnist download * also run install deps for building docs * install cmake * try sudo * hide output * try pip stuff * try to mock horovod * Tranfer -> Transfer * add torchvision to extras * revert pip stuff * mlflow file location * do not mock torch * torchvision * drone extra req. * try higher sphinx version * Revert "try higher sphinx version" This reverts commit 490ac28e46d6fd52352640dfdf0d765befa56988. * try coverage command * try coverage command * try undoc flag * newline * undo drone * report coverage * review Co-authored-by: Jirka Borovec <Borda@users.noreply.github.com> * remove torchvision from extras * skip tests only if torchvision not available * fix testoutput torchvision Co-authored-by: Jirka Borovec <Borda@users.noreply.github.com>
2020-05-05 02:16:54 +00:00
.. testcode::
doctest for .rst files (#1511) * add doctest to circleci * Revert "add doctest to circleci" This reverts commit c45b34ea911a81f87989f6c3a832b1e8d8c471c6. * Revert "Revert "add doctest to circleci"" This reverts commit 41fca97fdcfe1cf4f6bdb3bbba75d25fa3b11f70. * doctest docs rst files * Revert "doctest docs rst files" This reverts commit b4a2e83e3da5ed1909de500ec14b6b614527c07f. * doctest only rst * doctest debugging.rst * doctest apex * doctest callbacks * doctest early stopping * doctest for child modules * doctest experiment reporting * indentation * doctest fast training * doctest for hyperparams * doctests for lr_finder * doctests multi-gpu * more doctest * make doctest drone * fix label build error * update fast training * update invalid imports * fix problem with int device count * rebase stuff * wip * wip * wip * intro guide * add missing code block * circleci * logger import for doctest * test if doctest runs on drone * fix mnist download * also run install deps for building docs * install cmake * try sudo * hide output * try pip stuff * try to mock horovod * Tranfer -> Transfer * add torchvision to extras * revert pip stuff * mlflow file location * do not mock torch * torchvision * drone extra req. * try higher sphinx version * Revert "try higher sphinx version" This reverts commit 490ac28e46d6fd52352640dfdf0d765befa56988. * try coverage command * try coverage command * try undoc flag * newline * undo drone * report coverage * review Co-authored-by: Jirka Borovec <Borda@users.noreply.github.com> * remove torchvision from extras * skip tests only if torchvision not available * fix testoutput torchvision Co-authored-by: Jirka Borovec <Borda@users.noreply.github.com>
2020-05-05 02:16:54 +00:00
class LitMNISTDreamer(LightningModule):
doctest for .rst files (#1511) * add doctest to circleci * Revert "add doctest to circleci" This reverts commit c45b34ea911a81f87989f6c3a832b1e8d8c471c6. * Revert "Revert "add doctest to circleci"" This reverts commit 41fca97fdcfe1cf4f6bdb3bbba75d25fa3b11f70. * doctest docs rst files * Revert "doctest docs rst files" This reverts commit b4a2e83e3da5ed1909de500ec14b6b614527c07f. * doctest only rst * doctest debugging.rst * doctest apex * doctest callbacks * doctest early stopping * doctest for child modules * doctest experiment reporting * indentation * doctest fast training * doctest for hyperparams * doctests for lr_finder * doctests multi-gpu * more doctest * make doctest drone * fix label build error * update fast training * update invalid imports * fix problem with int device count * rebase stuff * wip * wip * wip * intro guide * add missing code block * circleci * logger import for doctest * test if doctest runs on drone * fix mnist download * also run install deps for building docs * install cmake * try sudo * hide output * try pip stuff * try to mock horovod * Tranfer -> Transfer * add torchvision to extras * revert pip stuff * mlflow file location * do not mock torch * torchvision * drone extra req. * try higher sphinx version * Revert "try higher sphinx version" This reverts commit 490ac28e46d6fd52352640dfdf0d765befa56988. * try coverage command * try coverage command * try undoc flag * newline * undo drone * report coverage * review Co-authored-by: Jirka Borovec <Borda@users.noreply.github.com> * remove torchvision from extras * skip tests only if torchvision not available * fix testoutput torchvision Co-authored-by: Jirka Borovec <Borda@users.noreply.github.com>
2020-05-05 02:16:54 +00:00
def forward(self, z):
imgs = self.decoder(z)
return imgs
doctest for .rst files (#1511) * add doctest to circleci * Revert "add doctest to circleci" This reverts commit c45b34ea911a81f87989f6c3a832b1e8d8c471c6. * Revert "Revert "add doctest to circleci"" This reverts commit 41fca97fdcfe1cf4f6bdb3bbba75d25fa3b11f70. * doctest docs rst files * Revert "doctest docs rst files" This reverts commit b4a2e83e3da5ed1909de500ec14b6b614527c07f. * doctest only rst * doctest debugging.rst * doctest apex * doctest callbacks * doctest early stopping * doctest for child modules * doctest experiment reporting * indentation * doctest fast training * doctest for hyperparams * doctests for lr_finder * doctests multi-gpu * more doctest * make doctest drone * fix label build error * update fast training * update invalid imports * fix problem with int device count * rebase stuff * wip * wip * wip * intro guide * add missing code block * circleci * logger import for doctest * test if doctest runs on drone * fix mnist download * also run install deps for building docs * install cmake * try sudo * hide output * try pip stuff * try to mock horovod * Tranfer -> Transfer * add torchvision to extras * revert pip stuff * mlflow file location * do not mock torch * torchvision * drone extra req. * try higher sphinx version * Revert "try higher sphinx version" This reverts commit 490ac28e46d6fd52352640dfdf0d765befa56988. * try coverage command * try coverage command * try undoc flag * newline * undo drone * report coverage * review Co-authored-by: Jirka Borovec <Borda@users.noreply.github.com> * remove torchvision from extras * skip tests only if torchvision not available * fix testoutput torchvision Co-authored-by: Jirka Borovec <Borda@users.noreply.github.com>
2020-05-05 02:16:54 +00:00
def training_step(self, batch, batch_idx):
x, y = batch
representation = self.encoder(x)
imgs = self(representation)
doctest for .rst files (#1511) * add doctest to circleci * Revert "add doctest to circleci" This reverts commit c45b34ea911a81f87989f6c3a832b1e8d8c471c6. * Revert "Revert "add doctest to circleci"" This reverts commit 41fca97fdcfe1cf4f6bdb3bbba75d25fa3b11f70. * doctest docs rst files * Revert "doctest docs rst files" This reverts commit b4a2e83e3da5ed1909de500ec14b6b614527c07f. * doctest only rst * doctest debugging.rst * doctest apex * doctest callbacks * doctest early stopping * doctest for child modules * doctest experiment reporting * indentation * doctest fast training * doctest for hyperparams * doctests for lr_finder * doctests multi-gpu * more doctest * make doctest drone * fix label build error * update fast training * update invalid imports * fix problem with int device count * rebase stuff * wip * wip * wip * intro guide * add missing code block * circleci * logger import for doctest * test if doctest runs on drone * fix mnist download * also run install deps for building docs * install cmake * try sudo * hide output * try pip stuff * try to mock horovod * Tranfer -> Transfer * add torchvision to extras * revert pip stuff * mlflow file location * do not mock torch * torchvision * drone extra req. * try higher sphinx version * Revert "try higher sphinx version" This reverts commit 490ac28e46d6fd52352640dfdf0d765befa56988. * try coverage command * try coverage command * try undoc flag * newline * undo drone * report coverage * review Co-authored-by: Jirka Borovec <Borda@users.noreply.github.com> * remove torchvision from extras * skip tests only if torchvision not available * fix testoutput torchvision Co-authored-by: Jirka Borovec <Borda@users.noreply.github.com>
2020-05-05 02:16:54 +00:00
loss = perceptual_loss(imgs, x)
return loss
.. code-block:: python
model = LitMNISTDreamer.load_from_checkpoint(PATH)
z = sample_noise()
generated_imgs = model(z)
How you split up what goes in `forward` vs `training_step` depends on how you want to use this model for
prediction.
----------------
The non essentials
==================
Extensibility
-------------
Although lightning makes everything super simple, it doesn't sacrifice any flexibility or control.
Lightning offers multiple ways of managing the training state.
Training overrides
^^^^^^^^^^^^^^^^^^
Any part of the training, validation and testing loop can be modified.
For instance, if you wanted to do your own backward pass, you would override the
default implementation
doctest for .rst files (#1511) * add doctest to circleci * Revert "add doctest to circleci" This reverts commit c45b34ea911a81f87989f6c3a832b1e8d8c471c6. * Revert "Revert "add doctest to circleci"" This reverts commit 41fca97fdcfe1cf4f6bdb3bbba75d25fa3b11f70. * doctest docs rst files * Revert "doctest docs rst files" This reverts commit b4a2e83e3da5ed1909de500ec14b6b614527c07f. * doctest only rst * doctest debugging.rst * doctest apex * doctest callbacks * doctest early stopping * doctest for child modules * doctest experiment reporting * indentation * doctest fast training * doctest for hyperparams * doctests for lr_finder * doctests multi-gpu * more doctest * make doctest drone * fix label build error * update fast training * update invalid imports * fix problem with int device count * rebase stuff * wip * wip * wip * intro guide * add missing code block * circleci * logger import for doctest * test if doctest runs on drone * fix mnist download * also run install deps for building docs * install cmake * try sudo * hide output * try pip stuff * try to mock horovod * Tranfer -> Transfer * add torchvision to extras * revert pip stuff * mlflow file location * do not mock torch * torchvision * drone extra req. * try higher sphinx version * Revert "try higher sphinx version" This reverts commit 490ac28e46d6fd52352640dfdf0d765befa56988. * try coverage command * try coverage command * try undoc flag * newline * undo drone * report coverage * review Co-authored-by: Jirka Borovec <Borda@users.noreply.github.com> * remove torchvision from extras * skip tests only if torchvision not available * fix testoutput torchvision Co-authored-by: Jirka Borovec <Borda@users.noreply.github.com>
2020-05-05 02:16:54 +00:00
.. testcode::
def backward(self, use_amp, loss, optimizer):
2020-07-26 05:38:55 +00:00
loss.backward()
With your own
doctest for .rst files (#1511) * add doctest to circleci * Revert "add doctest to circleci" This reverts commit c45b34ea911a81f87989f6c3a832b1e8d8c471c6. * Revert "Revert "add doctest to circleci"" This reverts commit 41fca97fdcfe1cf4f6bdb3bbba75d25fa3b11f70. * doctest docs rst files * Revert "doctest docs rst files" This reverts commit b4a2e83e3da5ed1909de500ec14b6b614527c07f. * doctest only rst * doctest debugging.rst * doctest apex * doctest callbacks * doctest early stopping * doctest for child modules * doctest experiment reporting * indentation * doctest fast training * doctest for hyperparams * doctests for lr_finder * doctests multi-gpu * more doctest * make doctest drone * fix label build error * update fast training * update invalid imports * fix problem with int device count * rebase stuff * wip * wip * wip * intro guide * add missing code block * circleci * logger import for doctest * test if doctest runs on drone * fix mnist download * also run install deps for building docs * install cmake * try sudo * hide output * try pip stuff * try to mock horovod * Tranfer -> Transfer * add torchvision to extras * revert pip stuff * mlflow file location * do not mock torch * torchvision * drone extra req. * try higher sphinx version * Revert "try higher sphinx version" This reverts commit 490ac28e46d6fd52352640dfdf0d765befa56988. * try coverage command * try coverage command * try undoc flag * newline * undo drone * report coverage * review Co-authored-by: Jirka Borovec <Borda@users.noreply.github.com> * remove torchvision from extras * skip tests only if torchvision not available * fix testoutput torchvision Co-authored-by: Jirka Borovec <Borda@users.noreply.github.com>
2020-05-05 02:16:54 +00:00
.. testcode::
doctest for .rst files (#1511) * add doctest to circleci * Revert "add doctest to circleci" This reverts commit c45b34ea911a81f87989f6c3a832b1e8d8c471c6. * Revert "Revert "add doctest to circleci"" This reverts commit 41fca97fdcfe1cf4f6bdb3bbba75d25fa3b11f70. * doctest docs rst files * Revert "doctest docs rst files" This reverts commit b4a2e83e3da5ed1909de500ec14b6b614527c07f. * doctest only rst * doctest debugging.rst * doctest apex * doctest callbacks * doctest early stopping * doctest for child modules * doctest experiment reporting * indentation * doctest fast training * doctest for hyperparams * doctests for lr_finder * doctests multi-gpu * more doctest * make doctest drone * fix label build error * update fast training * update invalid imports * fix problem with int device count * rebase stuff * wip * wip * wip * intro guide * add missing code block * circleci * logger import for doctest * test if doctest runs on drone * fix mnist download * also run install deps for building docs * install cmake * try sudo * hide output * try pip stuff * try to mock horovod * Tranfer -> Transfer * add torchvision to extras * revert pip stuff * mlflow file location * do not mock torch * torchvision * drone extra req. * try higher sphinx version * Revert "try higher sphinx version" This reverts commit 490ac28e46d6fd52352640dfdf0d765befa56988. * try coverage command * try coverage command * try undoc flag * newline * undo drone * report coverage * review Co-authored-by: Jirka Borovec <Borda@users.noreply.github.com> * remove torchvision from extras * skip tests only if torchvision not available * fix testoutput torchvision Co-authored-by: Jirka Borovec <Borda@users.noreply.github.com>
2020-05-05 02:16:54 +00:00
class LitMNIST(LightningModule):
def backward(self, use_amp, loss, optimizer, optimizer_idx):
# do a custom way of backward
loss.backward(retain_graph=True)
Or if you wanted to initialize ddp in a different way than the default one
doctest for .rst files (#1511) * add doctest to circleci * Revert "add doctest to circleci" This reverts commit c45b34ea911a81f87989f6c3a832b1e8d8c471c6. * Revert "Revert "add doctest to circleci"" This reverts commit 41fca97fdcfe1cf4f6bdb3bbba75d25fa3b11f70. * doctest docs rst files * Revert "doctest docs rst files" This reverts commit b4a2e83e3da5ed1909de500ec14b6b614527c07f. * doctest only rst * doctest debugging.rst * doctest apex * doctest callbacks * doctest early stopping * doctest for child modules * doctest experiment reporting * indentation * doctest fast training * doctest for hyperparams * doctests for lr_finder * doctests multi-gpu * more doctest * make doctest drone * fix label build error * update fast training * update invalid imports * fix problem with int device count * rebase stuff * wip * wip * wip * intro guide * add missing code block * circleci * logger import for doctest * test if doctest runs on drone * fix mnist download * also run install deps for building docs * install cmake * try sudo * hide output * try pip stuff * try to mock horovod * Tranfer -> Transfer * add torchvision to extras * revert pip stuff * mlflow file location * do not mock torch * torchvision * drone extra req. * try higher sphinx version * Revert "try higher sphinx version" This reverts commit 490ac28e46d6fd52352640dfdf0d765befa56988. * try coverage command * try coverage command * try undoc flag * newline * undo drone * report coverage * review Co-authored-by: Jirka Borovec <Borda@users.noreply.github.com> * remove torchvision from extras * skip tests only if torchvision not available * fix testoutput torchvision Co-authored-by: Jirka Borovec <Borda@users.noreply.github.com>
2020-05-05 02:16:54 +00:00
.. testcode::
def configure_ddp(self, model, device_ids):
# Lightning DDP simply routes to test_step, val_step, etc...
model = LightningDistributedDataParallel(
model,
device_ids=device_ids,
find_unused_parameters=True
)
return model
you could do your own:
doctest for .rst files (#1511) * add doctest to circleci * Revert "add doctest to circleci" This reverts commit c45b34ea911a81f87989f6c3a832b1e8d8c471c6. * Revert "Revert "add doctest to circleci"" This reverts commit 41fca97fdcfe1cf4f6bdb3bbba75d25fa3b11f70. * doctest docs rst files * Revert "doctest docs rst files" This reverts commit b4a2e83e3da5ed1909de500ec14b6b614527c07f. * doctest only rst * doctest debugging.rst * doctest apex * doctest callbacks * doctest early stopping * doctest for child modules * doctest experiment reporting * indentation * doctest fast training * doctest for hyperparams * doctests for lr_finder * doctests multi-gpu * more doctest * make doctest drone * fix label build error * update fast training * update invalid imports * fix problem with int device count * rebase stuff * wip * wip * wip * intro guide * add missing code block * circleci * logger import for doctest * test if doctest runs on drone * fix mnist download * also run install deps for building docs * install cmake * try sudo * hide output * try pip stuff * try to mock horovod * Tranfer -> Transfer * add torchvision to extras * revert pip stuff * mlflow file location * do not mock torch * torchvision * drone extra req. * try higher sphinx version * Revert "try higher sphinx version" This reverts commit 490ac28e46d6fd52352640dfdf0d765befa56988. * try coverage command * try coverage command * try undoc flag * newline * undo drone * report coverage * review Co-authored-by: Jirka Borovec <Borda@users.noreply.github.com> * remove torchvision from extras * skip tests only if torchvision not available * fix testoutput torchvision Co-authored-by: Jirka Borovec <Borda@users.noreply.github.com>
2020-05-05 02:16:54 +00:00
.. testcode::
doctest for .rst files (#1511) * add doctest to circleci * Revert "add doctest to circleci" This reverts commit c45b34ea911a81f87989f6c3a832b1e8d8c471c6. * Revert "Revert "add doctest to circleci"" This reverts commit 41fca97fdcfe1cf4f6bdb3bbba75d25fa3b11f70. * doctest docs rst files * Revert "doctest docs rst files" This reverts commit b4a2e83e3da5ed1909de500ec14b6b614527c07f. * doctest only rst * doctest debugging.rst * doctest apex * doctest callbacks * doctest early stopping * doctest for child modules * doctest experiment reporting * indentation * doctest fast training * doctest for hyperparams * doctests for lr_finder * doctests multi-gpu * more doctest * make doctest drone * fix label build error * update fast training * update invalid imports * fix problem with int device count * rebase stuff * wip * wip * wip * intro guide * add missing code block * circleci * logger import for doctest * test if doctest runs on drone * fix mnist download * also run install deps for building docs * install cmake * try sudo * hide output * try pip stuff * try to mock horovod * Tranfer -> Transfer * add torchvision to extras * revert pip stuff * mlflow file location * do not mock torch * torchvision * drone extra req. * try higher sphinx version * Revert "try higher sphinx version" This reverts commit 490ac28e46d6fd52352640dfdf0d765befa56988. * try coverage command * try coverage command * try undoc flag * newline * undo drone * report coverage * review Co-authored-by: Jirka Borovec <Borda@users.noreply.github.com> * remove torchvision from extras * skip tests only if torchvision not available * fix testoutput torchvision Co-authored-by: Jirka Borovec <Borda@users.noreply.github.com>
2020-05-05 02:16:54 +00:00
class LitMNIST(LightningModule):
def configure_ddp(self, model, device_ids):
model = Horovod(model)
# model = Ray(model)
return model
Every single part of training is configurable this way.
doctest for .rst files (#1511) * add doctest to circleci * Revert "add doctest to circleci" This reverts commit c45b34ea911a81f87989f6c3a832b1e8d8c471c6. * Revert "Revert "add doctest to circleci"" This reverts commit 41fca97fdcfe1cf4f6bdb3bbba75d25fa3b11f70. * doctest docs rst files * Revert "doctest docs rst files" This reverts commit b4a2e83e3da5ed1909de500ec14b6b614527c07f. * doctest only rst * doctest debugging.rst * doctest apex * doctest callbacks * doctest early stopping * doctest for child modules * doctest experiment reporting * indentation * doctest fast training * doctest for hyperparams * doctests for lr_finder * doctests multi-gpu * more doctest * make doctest drone * fix label build error * update fast training * update invalid imports * fix problem with int device count * rebase stuff * wip * wip * wip * intro guide * add missing code block * circleci * logger import for doctest * test if doctest runs on drone * fix mnist download * also run install deps for building docs * install cmake * try sudo * hide output * try pip stuff * try to mock horovod * Tranfer -> Transfer * add torchvision to extras * revert pip stuff * mlflow file location * do not mock torch * torchvision * drone extra req. * try higher sphinx version * Revert "try higher sphinx version" This reverts commit 490ac28e46d6fd52352640dfdf0d765befa56988. * try coverage command * try coverage command * try undoc flag * newline * undo drone * report coverage * review Co-authored-by: Jirka Borovec <Borda@users.noreply.github.com> * remove torchvision from extras * skip tests only if torchvision not available * fix testoutput torchvision Co-authored-by: Jirka Borovec <Borda@users.noreply.github.com>
2020-05-05 02:16:54 +00:00
For a full list look at `LightningModule <lightning-module.rst>`_.
----------------
Callbacks
---------
Another way to add arbitrary functionality is to add a custom callback
for hooks that you might care about
doctest for .rst files (#1511) * add doctest to circleci * Revert "add doctest to circleci" This reverts commit c45b34ea911a81f87989f6c3a832b1e8d8c471c6. * Revert "Revert "add doctest to circleci"" This reverts commit 41fca97fdcfe1cf4f6bdb3bbba75d25fa3b11f70. * doctest docs rst files * Revert "doctest docs rst files" This reverts commit b4a2e83e3da5ed1909de500ec14b6b614527c07f. * doctest only rst * doctest debugging.rst * doctest apex * doctest callbacks * doctest early stopping * doctest for child modules * doctest experiment reporting * indentation * doctest fast training * doctest for hyperparams * doctests for lr_finder * doctests multi-gpu * more doctest * make doctest drone * fix label build error * update fast training * update invalid imports * fix problem with int device count * rebase stuff * wip * wip * wip * intro guide * add missing code block * circleci * logger import for doctest * test if doctest runs on drone * fix mnist download * also run install deps for building docs * install cmake * try sudo * hide output * try pip stuff * try to mock horovod * Tranfer -> Transfer * add torchvision to extras * revert pip stuff * mlflow file location * do not mock torch * torchvision * drone extra req. * try higher sphinx version * Revert "try higher sphinx version" This reverts commit 490ac28e46d6fd52352640dfdf0d765befa56988. * try coverage command * try coverage command * try undoc flag * newline * undo drone * report coverage * review Co-authored-by: Jirka Borovec <Borda@users.noreply.github.com> * remove torchvision from extras * skip tests only if torchvision not available * fix testoutput torchvision Co-authored-by: Jirka Borovec <Borda@users.noreply.github.com>
2020-05-05 02:16:54 +00:00
.. testcode::
doctest for .rst files (#1511) * add doctest to circleci * Revert "add doctest to circleci" This reverts commit c45b34ea911a81f87989f6c3a832b1e8d8c471c6. * Revert "Revert "add doctest to circleci"" This reverts commit 41fca97fdcfe1cf4f6bdb3bbba75d25fa3b11f70. * doctest docs rst files * Revert "doctest docs rst files" This reverts commit b4a2e83e3da5ed1909de500ec14b6b614527c07f. * doctest only rst * doctest debugging.rst * doctest apex * doctest callbacks * doctest early stopping * doctest for child modules * doctest experiment reporting * indentation * doctest fast training * doctest for hyperparams * doctests for lr_finder * doctests multi-gpu * more doctest * make doctest drone * fix label build error * update fast training * update invalid imports * fix problem with int device count * rebase stuff * wip * wip * wip * intro guide * add missing code block * circleci * logger import for doctest * test if doctest runs on drone * fix mnist download * also run install deps for building docs * install cmake * try sudo * hide output * try pip stuff * try to mock horovod * Tranfer -> Transfer * add torchvision to extras * revert pip stuff * mlflow file location * do not mock torch * torchvision * drone extra req. * try higher sphinx version * Revert "try higher sphinx version" This reverts commit 490ac28e46d6fd52352640dfdf0d765befa56988. * try coverage command * try coverage command * try undoc flag * newline * undo drone * report coverage * review Co-authored-by: Jirka Borovec <Borda@users.noreply.github.com> * remove torchvision from extras * skip tests only if torchvision not available * fix testoutput torchvision Co-authored-by: Jirka Borovec <Borda@users.noreply.github.com>
2020-05-05 02:16:54 +00:00
from pytorch_lightning.callbacks import Callback
doctest for .rst files (#1511) * add doctest to circleci * Revert "add doctest to circleci" This reverts commit c45b34ea911a81f87989f6c3a832b1e8d8c471c6. * Revert "Revert "add doctest to circleci"" This reverts commit 41fca97fdcfe1cf4f6bdb3bbba75d25fa3b11f70. * doctest docs rst files * Revert "doctest docs rst files" This reverts commit b4a2e83e3da5ed1909de500ec14b6b614527c07f. * doctest only rst * doctest debugging.rst * doctest apex * doctest callbacks * doctest early stopping * doctest for child modules * doctest experiment reporting * indentation * doctest fast training * doctest for hyperparams * doctests for lr_finder * doctests multi-gpu * more doctest * make doctest drone * fix label build error * update fast training * update invalid imports * fix problem with int device count * rebase stuff * wip * wip * wip * intro guide * add missing code block * circleci * logger import for doctest * test if doctest runs on drone * fix mnist download * also run install deps for building docs * install cmake * try sudo * hide output * try pip stuff * try to mock horovod * Tranfer -> Transfer * add torchvision to extras * revert pip stuff * mlflow file location * do not mock torch * torchvision * drone extra req. * try higher sphinx version * Revert "try higher sphinx version" This reverts commit 490ac28e46d6fd52352640dfdf0d765befa56988. * try coverage command * try coverage command * try undoc flag * newline * undo drone * report coverage * review Co-authored-by: Jirka Borovec <Borda@users.noreply.github.com> * remove torchvision from extras * skip tests only if torchvision not available * fix testoutput torchvision Co-authored-by: Jirka Borovec <Borda@users.noreply.github.com>
2020-05-05 02:16:54 +00:00
class MyPrintingCallback(Callback):
def on_init_start(self, trainer):
print('Starting to init trainer!')
def on_init_end(self, trainer):
doctest for .rst files (#1511) * add doctest to circleci * Revert "add doctest to circleci" This reverts commit c45b34ea911a81f87989f6c3a832b1e8d8c471c6. * Revert "Revert "add doctest to circleci"" This reverts commit 41fca97fdcfe1cf4f6bdb3bbba75d25fa3b11f70. * doctest docs rst files * Revert "doctest docs rst files" This reverts commit b4a2e83e3da5ed1909de500ec14b6b614527c07f. * doctest only rst * doctest debugging.rst * doctest apex * doctest callbacks * doctest early stopping * doctest for child modules * doctest experiment reporting * indentation * doctest fast training * doctest for hyperparams * doctests for lr_finder * doctests multi-gpu * more doctest * make doctest drone * fix label build error * update fast training * update invalid imports * fix problem with int device count * rebase stuff * wip * wip * wip * intro guide * add missing code block * circleci * logger import for doctest * test if doctest runs on drone * fix mnist download * also run install deps for building docs * install cmake * try sudo * hide output * try pip stuff * try to mock horovod * Tranfer -> Transfer * add torchvision to extras * revert pip stuff * mlflow file location * do not mock torch * torchvision * drone extra req. * try higher sphinx version * Revert "try higher sphinx version" This reverts commit 490ac28e46d6fd52352640dfdf0d765befa56988. * try coverage command * try coverage command * try undoc flag * newline * undo drone * report coverage * review Co-authored-by: Jirka Borovec <Borda@users.noreply.github.com> * remove torchvision from extras * skip tests only if torchvision not available * fix testoutput torchvision Co-authored-by: Jirka Borovec <Borda@users.noreply.github.com>
2020-05-05 02:16:54 +00:00
print('Trainer is init now')
def on_train_end(self, trainer, pl_module):
print('do something when training ends')
And pass the callbacks into the trainer
doctest for .rst files (#1511) * add doctest to circleci * Revert "add doctest to circleci" This reverts commit c45b34ea911a81f87989f6c3a832b1e8d8c471c6. * Revert "Revert "add doctest to circleci"" This reverts commit 41fca97fdcfe1cf4f6bdb3bbba75d25fa3b11f70. * doctest docs rst files * Revert "doctest docs rst files" This reverts commit b4a2e83e3da5ed1909de500ec14b6b614527c07f. * doctest only rst * doctest debugging.rst * doctest apex * doctest callbacks * doctest early stopping * doctest for child modules * doctest experiment reporting * indentation * doctest fast training * doctest for hyperparams * doctests for lr_finder * doctests multi-gpu * more doctest * make doctest drone * fix label build error * update fast training * update invalid imports * fix problem with int device count * rebase stuff * wip * wip * wip * intro guide * add missing code block * circleci * logger import for doctest * test if doctest runs on drone * fix mnist download * also run install deps for building docs * install cmake * try sudo * hide output * try pip stuff * try to mock horovod * Tranfer -> Transfer * add torchvision to extras * revert pip stuff * mlflow file location * do not mock torch * torchvision * drone extra req. * try higher sphinx version * Revert "try higher sphinx version" This reverts commit 490ac28e46d6fd52352640dfdf0d765befa56988. * try coverage command * try coverage command * try undoc flag * newline * undo drone * report coverage * review Co-authored-by: Jirka Borovec <Borda@users.noreply.github.com> * remove torchvision from extras * skip tests only if torchvision not available * fix testoutput torchvision Co-authored-by: Jirka Borovec <Borda@users.noreply.github.com>
2020-05-05 02:16:54 +00:00
.. testcode::
trainer = Trainer(callbacks=[MyPrintingCallback()])
.. testoutput::
:hide:
doctest for .rst files (#1511) * add doctest to circleci * Revert "add doctest to circleci" This reverts commit c45b34ea911a81f87989f6c3a832b1e8d8c471c6. * Revert "Revert "add doctest to circleci"" This reverts commit 41fca97fdcfe1cf4f6bdb3bbba75d25fa3b11f70. * doctest docs rst files * Revert "doctest docs rst files" This reverts commit b4a2e83e3da5ed1909de500ec14b6b614527c07f. * doctest only rst * doctest debugging.rst * doctest apex * doctest callbacks * doctest early stopping * doctest for child modules * doctest experiment reporting * indentation * doctest fast training * doctest for hyperparams * doctests for lr_finder * doctests multi-gpu * more doctest * make doctest drone * fix label build error * update fast training * update invalid imports * fix problem with int device count * rebase stuff * wip * wip * wip * intro guide * add missing code block * circleci * logger import for doctest * test if doctest runs on drone * fix mnist download * also run install deps for building docs * install cmake * try sudo * hide output * try pip stuff * try to mock horovod * Tranfer -> Transfer * add torchvision to extras * revert pip stuff * mlflow file location * do not mock torch * torchvision * drone extra req. * try higher sphinx version * Revert "try higher sphinx version" This reverts commit 490ac28e46d6fd52352640dfdf0d765befa56988. * try coverage command * try coverage command * try undoc flag * newline * undo drone * report coverage * review Co-authored-by: Jirka Borovec <Borda@users.noreply.github.com> * remove torchvision from extras * skip tests only if torchvision not available * fix testoutput torchvision Co-authored-by: Jirka Borovec <Borda@users.noreply.github.com>
2020-05-05 02:16:54 +00:00
Starting to init trainer!
Trainer is init now
CI: Force docs warnings to be raised as errors (+ fix all) (#1191) * add argument to force warn * fix automodule error * fix permalink error * fix indentation warning * fix warning * fix import warnings * fix duplicate label warning * fix bullet point indentation warning * fix duplicate label warning * fix "import not top level" warning * line too long * fix indentation * fix bullet points indentation warning * fix hooks warnings * fix reference problem with excluded test_tube * fix indentation in print * change imports for trains logger * remove pandas type annotation * Update pytorch_lightning/core/lightning.py * include bullet points inside note * remove old quick start guide (unused) * fix unused warning * fix formatting * fix duplicate label issue * fix duplicate label warning (replaced by class ref) * fix tick * fix indentation warnings * docstring ticks * remove obsolete docstring typing * Revert "remove old quick start guide (unused)" This reverts commit d51bb40695442c8fa11bc9df74f6db56264f7509. * added old quick start guide to navigation * remove unused tutorials file * ignore some modules that got deprecated and are not used anymore * fix duplicate label warning * move examples doc and exclude pl_examples from autodoc * fix formatting for configure_optimizer * fix no blank line warnings * fix "see also" labels and add paramref extension * fix more reference problems * fix multi-gpu reference * fix weird warning * fix indentation and unrecognized characters in code block * fix warning "... not included in toctree" * fix PIL import error * fix duplicate target "here" warning * fix broken link * revert accidentally moved pl_examples * changelog * stdout * note some things to know Co-Authored-By: Jirka Borovec <Borda@users.noreply.github.com> Co-authored-by: J. Borovec <jirka.borovec@seznam.cz> Co-authored-by: Jirka Borovec <Borda@users.noreply.github.com>
2020-03-20 19:49:01 +00:00
.. note::
See full list of 12+ hooks in the :ref:`callbacks`.
----------------
.. include:: child_modules.rst
----------------
.. include:: transfer_learning.rst