fuzzysearch/benchmarks/dna_search.py

import timeit

print timeit.timeit(
    'find_near_matches_levenshtein_ngrams(pattern, text, 1)',
    setup='text = "ATCG" * (10**3); pattern = "GCTAGCTAGCTA"; from fuzzysearch import find_near_matches_levenshtein_ngrams',
)