yet another benchmark for Kevin Rue's use case

2014-04-11 01:28:01 +03:00 · 2014-04-11 01:28:01 +03:00 · 404b01159f
parent c58dff8f29
commit 404b01159f
1 changed files with 5 additions and 0 deletions
--- a/benchmarks/init.py
+++ b/benchmarks/init.py
@ -57,6 +57,11 @@ benchmarks = {
        sequence = ''.join(random.choice('ATCG' * 5 + 'N') for _i in xrange(90)),
        max_dist = 3,
    ),
+    'random_kevin_partial_match': dict(
+        subsequence = 'AAGTCTAGT' + ''.join(random.choice('ATCG') for _i in xrange(36-9)),
+        sequence = 'AAGTCTAGT' + ''.join(random.choice('ATCG' * 5 + 'N') for _i in xrange(90-9)),
+        max_dist = 3,
+    ),
 }