mirror of https://github.com/explosion/spaCy.git
311 lines
11 KiB
Cython
311 lines
11 KiB
Cython
from __future__ import unicode_literals
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from libc.stdio cimport fopen, fclose, fread, fwrite, FILE
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from libc.string cimport memset
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from libc.stdint cimport int32_t
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import bz2
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from os import path
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import codecs
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import math
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import json
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from .lexeme cimport EMPTY_LEXEME
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from .lexeme cimport set_lex_struct_props
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from .lexeme cimport Lexeme
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from .strings cimport hash_string
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from .orth cimport word_shape
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from .typedefs cimport attr_t
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from .cfile cimport CFile
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from cymem.cymem cimport Address
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from . import util
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from .serialize.packer cimport Packer
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DEF MAX_VEC_SIZE = 100000
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cdef float[MAX_VEC_SIZE] EMPTY_VEC
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memset(EMPTY_VEC, 0, sizeof(EMPTY_VEC))
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memset(&EMPTY_LEXEME, 0, sizeof(LexemeC))
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EMPTY_LEXEME.repvec = EMPTY_VEC
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cdef class Vocab:
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'''A map container for a language's LexemeC structs.
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'''
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def __init__(self, data_dir=None, get_lex_props=None, load_vectors=True,
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pos_tags=None):
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self.mem = Pool()
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self._by_hash = PreshMap()
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self._by_orth = PreshMap()
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self.strings = StringStore()
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self.pos_tags = pos_tags if pos_tags is not None else {}
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self.lexeme_props_getter = get_lex_props
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self.repvec_length = 0
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self.length = 0
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self._add_lex_to_vocab(0, &EMPTY_LEXEME)
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if data_dir is not None:
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if not path.exists(data_dir):
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raise IOError("Directory %s not found -- cannot load Vocab." % data_dir)
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if data_dir is not None:
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if not path.isdir(data_dir):
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raise IOError("Path %s is a file, not a dir -- cannot load Vocab." % data_dir)
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self.load_lexemes(path.join(data_dir, 'strings.txt'),
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path.join(data_dir, 'lexemes.bin'))
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if load_vectors and path.exists(path.join(data_dir, 'vec.bin')):
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self.repvec_length = self.load_rep_vectors(path.join(data_dir, 'vec.bin'))
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self._serializer = None
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self.data_dir = data_dir
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property serializer:
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def __get__(self):
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if self._serializer is None:
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freqs = []
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if self.data_dir is not None:
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freqs_loc = path.join(self.data_dir, 'serializer.json')
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if path.exists(freqs_loc):
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freqs = json.load(open(freqs_loc))
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self._serializer = Packer(self, freqs)
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return self._serializer
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def __len__(self):
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"""The current number of lexemes stored."""
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return self.length
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cdef const LexemeC* get(self, Pool mem, unicode string) except NULL:
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'''Get a pointer to a LexemeC from the lexicon, creating a new Lexeme
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if necessary, using memory acquired from the given pool. If the pool
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is the lexicon's own memory, the lexeme is saved in the lexicon.'''
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cdef LexemeC* lex
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cdef hash_t key = hash_string(string)
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lex = <LexemeC*>self._by_hash.get(key)
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if lex != NULL:
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return lex
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cdef bint is_oov = mem is not self.mem
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if len(string) < 3:
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mem = self.mem
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lex = <LexemeC*>mem.alloc(sizeof(LexemeC), 1)
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props = self.lexeme_props_getter(string)
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set_lex_struct_props(lex, props, self.strings, EMPTY_VEC)
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if is_oov:
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lex.id = 0
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else:
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self._add_lex_to_vocab(key, lex)
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return lex
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cdef const LexemeC* get_by_orth(self, Pool mem, attr_t orth) except NULL:
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'''Get a pointer to a LexemeC from the lexicon, creating a new Lexeme
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if necessary, using memory acquired from the given pool. If the pool
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is the lexicon's own memory, the lexeme is saved in the lexicon.'''
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cdef LexemeC* lex
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lex = <LexemeC*>self._by_orth.get(orth)
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if lex != NULL:
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return lex
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cdef unicode string = self.strings[orth]
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cdef bint is_oov = mem is not self.mem
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if len(string) < 3:
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mem = self.mem
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lex = <LexemeC*>mem.alloc(sizeof(LexemeC), 1)
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props = self.lexeme_props_getter(string)
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set_lex_struct_props(lex, props, self.strings, EMPTY_VEC)
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if is_oov:
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lex.id = 0
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else:
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self._add_lex_to_vocab(hash_string(string), lex)
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return lex
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cdef int _add_lex_to_vocab(self, hash_t key, const LexemeC* lex) except -1:
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self._by_hash.set(key, <void*>lex)
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self._by_orth.set(lex.orth, <void*>lex)
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self.length += 1
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def __iter__(self):
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cdef attr_t orth
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cdef size_t addr
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for orth, addr in self._by_orth.items():
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yield Lexeme.from_ptr(<LexemeC*>addr, self.strings, self.repvec_length)
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def __getitem__(self, id_or_string):
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'''Retrieve a lexeme, given an int ID or a unicode string. If a previously
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unseen unicode string is given, a new lexeme is created and stored.
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Args:
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id_or_string (int or unicode):
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The integer ID of a word, or its unicode string. If an int >= Lexicon.size,
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IndexError is raised. If id_or_string is neither an int nor a unicode string,
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ValueError is raised.
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Returns:
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lexeme (Lexeme):
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An instance of the Lexeme Python class, with data copied on
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instantiation.
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'''
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cdef const LexemeC* lexeme
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cdef attr_t orth
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if type(id_or_string) == int:
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orth = id_or_string
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lexeme = <LexemeC*>self._by_orth.get(orth)
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if lexeme == NULL:
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raise KeyError(id_or_string)
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assert lexeme.orth == orth, ('%d vs %d' % (lexeme.orth, orth))
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elif type(id_or_string) == unicode:
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lexeme = self.get(self.mem, id_or_string)
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assert lexeme.orth == self.strings[id_or_string]
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else:
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raise ValueError("Vocab unable to map type: "
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"%s. Maps unicode --> Lexeme or "
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"int --> Lexeme" % str(type(id_or_string)))
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return Lexeme.from_ptr(lexeme, self.strings, self.repvec_length)
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def __setitem__(self, unicode string, dict props):
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cdef hash_t key = hash_string(string)
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cdef LexemeC* lex
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lex = <LexemeC*>self._by_hash.get(key)
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if lex == NULL:
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lex = <LexemeC*>self.mem.alloc(sizeof(LexemeC), 1)
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set_lex_struct_props(lex, props, self.strings, EMPTY_VEC)
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self._add_lex_to_vocab(key, lex)
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def dump(self, loc):
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if path.exists(loc):
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assert not path.isdir(loc)
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cdef bytes bytes_loc = loc.encode('utf8') if type(loc) == unicode else loc
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cdef CFile fp = CFile(bytes_loc, 'wb')
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cdef size_t st
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cdef size_t addr
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cdef hash_t key
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for key, addr in self._by_hash.items():
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lexeme = <LexemeC*>addr
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fp.write_from(&lexeme.orth, sizeof(lexeme.orth), 1)
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fp.write_from(lexeme, sizeof(LexemeC), 1)
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fp.close()
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def load_lexemes(self, strings_loc, loc):
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self.strings.load(strings_loc)
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if not path.exists(loc):
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raise IOError('LexemeCs file not found at %s' % loc)
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cdef bytes bytes_loc = loc.encode('utf8') if type(loc) == unicode else loc
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cdef FILE* fp = fopen(<char*>bytes_loc, b'rb')
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if fp == NULL:
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raise IOError('lexemes data file present, but cannot open from ' % loc)
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cdef size_t st
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cdef LexemeC* lexeme
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cdef attr_t orth
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cdef hash_t key
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cdef unicode py_str
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i = 0
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while True:
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st = fread(&orth, sizeof(orth), 1, fp)
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if st != 1:
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break
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lexeme = <LexemeC*>self.mem.alloc(sizeof(LexemeC), 1)
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# Copies data from the file into the lexeme
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st = fread(lexeme, sizeof(LexemeC), 1, fp)
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lexeme.repvec = EMPTY_VEC
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if st != 1:
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break
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if orth != lexeme.orth:
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# TODO: Improve this error message, pending resolution to Issue #64
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raise IOError('Error reading from lexemes.bin. Integrity check fails.')
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py_str = self.strings[orth]
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key = hash_string(py_str)
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self._by_hash.set(key, lexeme)
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self._by_orth.set(lexeme.orth, lexeme)
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self.length += 1
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i += 1
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fclose(fp)
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def load_rep_vectors(self, loc):
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cdef CFile file_ = CFile(loc, b'rb')
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cdef int32_t word_len
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cdef int32_t vec_len
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cdef int32_t prev_vec_len = 0
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cdef float* vec
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cdef Address mem
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cdef attr_t string_id
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cdef bytes py_word
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cdef vector[float*] vectors
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cdef int i
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cdef Pool tmp_mem = Pool()
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while True:
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try:
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file_.read_into(&word_len, sizeof(word_len), 1)
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except IOError:
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break
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file_.read_into(&vec_len, sizeof(vec_len), 1)
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if prev_vec_len != 0 and vec_len != prev_vec_len:
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raise VectorReadError.mismatched_sizes(loc, vec_len, prev_vec_len)
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if 0 >= vec_len >= MAX_VEC_SIZE:
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raise VectorReadError.bad_size(loc, vec_len)
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chars = <char*>file_.alloc_read(tmp_mem, word_len, sizeof(char))
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vec = <float*>file_.alloc_read(self.mem, vec_len, sizeof(float))
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string_id = self.strings[chars[:word_len]]
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while string_id >= vectors.size():
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vectors.push_back(EMPTY_VEC)
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assert vec != NULL
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vectors[string_id] = vec
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cdef LexemeC* lex
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cdef size_t lex_addr
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for orth, lex_addr in self._by_orth.items():
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lex = <LexemeC*>lex_addr
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if lex.lower < vectors.size():
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lex.repvec = vectors[lex.lower]
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for i in range(vec_len):
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lex.l2_norm += (lex.repvec[i] * lex.repvec[i])
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lex.l2_norm = math.sqrt(lex.l2_norm)
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else:
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lex.repvec = EMPTY_VEC
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return vec_len
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def write_binary_vectors(in_loc, out_loc):
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cdef CFile out_file = CFile(out_loc, 'wb')
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cdef Address mem
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cdef int32_t word_len
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cdef int32_t vec_len
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cdef char* chars
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with bz2.BZ2File(in_loc, 'r') as file_:
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for line in file_:
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pieces = line.split()
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word = pieces.pop(0)
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mem = Address(len(pieces), sizeof(float))
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vec = <float*>mem.ptr
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for i, val_str in enumerate(pieces):
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vec[i] = float(val_str)
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word_len = len(word)
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vec_len = len(pieces)
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out_file.write_from(&word_len, 1, sizeof(word_len))
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out_file.write_from(&vec_len, 1, sizeof(vec_len))
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chars = <char*>word
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out_file.write_from(chars, len(word), sizeof(char))
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out_file.write_from(vec, vec_len, sizeof(float))
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class VectorReadError(Exception):
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@classmethod
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def mismatched_sizes(cls, loc, prev_size, curr_size):
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return cls(
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"Error reading word vectors from %s.\n"
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"All vectors must be the same size.\n"
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"Prev size: %d\n"
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"Curr size: %d" % (loc, prev_size, curr_size))
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@classmethod
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def bad_size(cls, loc, size):
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return cls(
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"Error reading word vectors from %s.\n"
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"Vector size: %d\n"
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"Max size: %d\n"
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"Min size: 1\n" % (loc, size, MAX_VEC_SIZE))
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