Commit Graph

245 Commits

Author SHA1 Message Date
Matthew Honnibal 343f4f21d7 Enable Python 3.13 2024-12-11 14:13:28 +01:00
Matthew Honnibal a6317b3836
Fix allocation of non-transient strings in StringStore (#13713)
* Fix bug in memory-zone code when adding non-transient strings. The error could result in segmentation faults or other memory errors during memory zones if new labels were added to the model.
* Fix handling of new morphological labels within memory zones. Addresses second issue reported in Memory leak of MorphAnalysis object. #13684
2024-12-11 13:06:53 +01:00
Matthew Honnibal 628c973db5 Note minimum python requirement in setup.cfg 2024-10-02 00:49:09 +02:00
Matthew Honnibal 3a0aadcf86 Update spacy[apple] thinc-apple-ops pin for numpy v2 compatibility 2024-10-01 10:16:35 +02:00
Matthew Honnibal a0ce61f55a Fix thinc pin 2024-09-13 14:21:03 +02:00
Matthew Honnibal 184e508d9c Update numpy pin 2024-09-11 15:57:17 +02:00
Sofie Van Landeghem a6d0fc3602
Remove typing-extensions from requirements (#13516) 2024-05-31 19:20:46 +02:00
Sofie Van Landeghem ecd85d2618
Update Typer pin and GH actions (#13471)
* update gh actions

* pin typer upperbound to 1.0.0
2024-04-29 13:28:46 +02:00
Sofie Van Landeghem 6d6c10ab9c
Fix CI (#13469)
* Remove hardcoded architecture setting

* update classifiers to include Python 3.12
2024-04-29 10:18:07 +02:00
Sofie Van Landeghem f5e85fa05a
allow weasel 0.4.x (#13409) 2024-04-04 12:55:08 +02:00
Sofie Van Landeghem d410d95b52
remove smart_open requirement as it's taken care of via Weasel (#13391) 2024-03-22 18:21:20 +01:00
Daniël de Kok e2a3952de5
Add spacy.TextCatParametricAttention.v1 (#13201)
* Add spacy.TextCatParametricAttention.v1

This layer provides is a simplification of the ensemble classifier that
only uses paramteric attention. We have found empirically that with a
sufficient amount of training data, using the ensemble classifier with
BoW does not provide significant improvement in classifier accuracy.
However, plugging in a BoW classifier does reduce GPU training and
inference performance substantially, since it uses a GPU-only kernel.

* Fix merge fallout
2024-01-02 10:03:06 +01:00
Adriane Boyd 6e54360a3d
Remove pathy dependency, update docs for cloudpathlib in Weasel (#13035) 2023-10-05 08:50:22 +02:00
Matthew Hoffman 483d4a5bc0
Allow spacy-transformers v1.3.x in transformers extra (#13025)
Co-authored-by: Adriane Boyd <adrianeboyd@gmail.com>
2023-09-29 08:22:56 +02:00
Adriane Boyd 406794a081 Merge remote-tracking branch 'upstream/master' into chore/update-develop-from-master-v3.7-1 2023-09-28 15:09:06 +02:00
Adriane Boyd ff4215f1c7
Drop support for python 3.6 (#13009)
* Drop support for python 3.6

* Update docs
2023-09-25 14:48:38 +02:00
Adriane Boyd 198488ee86
Extend to weasel v0.3 (#12908)
* Extend to weasel v0.3

* Clean up unused imports in test_cli
2023-08-16 17:36:53 +02:00
Adriane Boyd 6a4aa43164
Extend to thinc v8.2 (#12897) 2023-08-11 13:05:46 +02:00
Adriane Boyd 9622c11529
Extend to weasel v0.2 (#12902) 2023-08-11 10:59:51 +02:00
Adriane Boyd 060241a8d5 Revert "Extend to spacy-transformers v1.3.x (#12877)"
This reverts commit e5773e0c69.
2023-08-10 11:42:09 +02:00
Adriane Boyd c4e378df97
Update CuPy extras (#12890)
* Add `cuda12x` for `cupy-cuda12x`.
* Drop `cuda-autodetect` from quickstart, set default to `cuda11x`
instead.
2023-08-08 12:58:28 +02:00
Adriane Boyd 245e2ddc25
Allow pydantic v2 using transitional v1 support (#12888) 2023-08-08 11:27:28 +02:00
Adriane Boyd e5773e0c69
Extend to spacy-transformers v1.3.x (#12877) 2023-08-02 09:35:16 +02:00
Adriane Boyd 9ffa5d8a15
Remove ray extra (#12870) 2023-07-28 15:48:36 +02:00
Adriane Boyd 5888afa884
Update numpy build constraints for numpy 1.25 (#12839)
* Update numpy build constraints for numpy 1.25

Starting in numpy 1.25 (see
https://github.com/numpy/numpy/releases/tag/v1.25.0), the numpy C API is
backwards-compatible by default.

For python 3.9+, we should be able to drop the specific numpy build
requirements and use `numpy>=1.25`, which is currently
backwards-compatible to `numpy>=1.19`.

In the future, the python <3.9 requirements could be dropped and the
lower numpy pin could correspond to the oldest supported version for the
current lower python pin.

* Turn off fail-fast

* Revert "Turn off fail-fast"

This reverts commit 4306f516bc.

* Update for python 3.6

* Fix typo
2023-07-24 10:32:56 +02:00
Sofie Van Landeghem b1b20bf69d
Replace projects functionality with weasel (#12769)
* Setting up weasel branch (#12456)

* remove project-specific functionality

* remove project-specific tests

* remove project-specific schemas

* remove project-specific information in about

* remove project-specific functions in util.py

* remove project-specific error strings

* remove project-specific CLI commands

* black formatting

* restore some functions that are used beyond projects

* remove project imports

* remove imports

* remove remote_storage tests

* remove one more project unit test

* update for PR 12394

* remove get_hash and get_checksum

* remove upload_ and download_file methods

* remove ensure_pathy

* revert clumsy fingers

* reinstate E970

* feat: use weasel as spacy project command (#12473)

* feat: use weasel as spacy project command

* build: use constrained requirement for weasel

* feat: add weasel to the library requirements

* build: update weasel to new version

* build: use specific weasel tag

* build: use weasel-0.1.0rc1 from PyPI

* fix: remove weasel from requirements.txt

* fix: requirements.txt and setup.cfg need to reflect each other

* feat: remove legacy spacy project code

* bump version

* further merge fixes

* isort

---------

Co-authored-by: Basile Dura <bdura@users.noreply.github.com>
2023-07-07 09:10:27 +02:00
Basile Dura f96b9e03df
build: bump typer version to accept >=0.3<0.10 (#12631) 2023-05-15 08:06:58 +02:00
Adriane Boyd 476a2e7a0a
Allow cupy 12.0 for extras (#12490) 2023-03-31 13:48:15 +02:00
Paul O'Leary McCann e656189ec3
Change GPU efficient textcat to use CNN, not BOW in generated configs (#11900)
* Change GPU efficient textcat to use CNN, not BOW

If you generate a config with a textcat component using GPU
(transformers), the defaut option (efficiency) uses a BOW architecture,
which does not use tok2vec features. While that can make sense as part
of a larger pipeline, in the case of just a transformer and a textcat,
that means the transformer is doing a lot of work for no purpose.

This changes it so that the CNN architecture is used instead. It could
also be changed to be the same as the accuracy config, which uses the
ensemble architecture.

* Add the transformer when using a textcat with GPU

* Switch ubuntu-latest to ubuntu-20.04 in main tests (#11928)

* Switch ubuntu-latest to ubuntu-20.04 in main tests

* Only use 20.04 for 3.6

* Require thinc v8.1.7

* Require thinc v8.1.8

* Break up longer expression

---------

Co-authored-by: Adriane Boyd <adrianeboyd@gmail.com>
2023-03-07 17:47:45 +01:00
Albert Villanova del Moral 25373d8e8e
Fix required maximum version of typing-extensions (#12036)
* Fix required maximum version of typing-extensions

* Restrict to <4.5.0, sync minimum pin

Co-authored-by: Adriane Boyd <adrianeboyd@gmail.com>
2023-01-13 10:44:02 +01:00
Adriane Boyd e0168ccce9
Allow spacy-transformers v1.2.x in transformers extra (#12092) 2023-01-11 13:54:58 +01:00
Adriane Boyd ef9e504eac
Rename modified textcat scorer to v2 (#11971)
As a follow-up to #11696, rename the modified scorer to v2 and move the
v1 scorer to `spacy-legacy`.
2022-12-29 14:01:08 +01:00
Adriane Boyd 64d2d27c5d
Add classifier for python 3.11 (#12013) 2022-12-22 10:53:16 +01:00
Adriane Boyd 8c291ace0c
Extend to wasabi v1.1 (#11945)
* Extend to wasabi v1.1

* Temporarily run mypy and tests with newest wasabi

* Temporarily skip check requirements test

* Revert "Temporarily skip check requirements test"

This reverts commit 44f4ce20a8.

* Revert "Temporarily run mypy and tests with newest wasabi"

This reverts commit e677a2257c.
2022-12-12 08:38:36 +01:00
Adriane Boyd 1ebe7db07c
Support local filesystem remotes for projects (#11762)
* Support local filesystem remotes for projects

* Fix support for local filesystem remotes for projects
  * Use `FluidPath` instead of `Pathy` to support both filesystem and
    remote paths
  * Create missing parent directories if required for local filesystem
  * Add a more general `_file_exists` method to support both `Pathy`,
    `Path`, and `smart_open`-compatible URLs
* Add explicit `smart_open` dependency starting with support for
  `compression` flag
* Update `pathy` dependency to exclude older versions that aren't
  compatible with required `smart_open` version
* Update docs to refer to `Pathy` instead of `smart_open` for project
  remotes (technically you can still push to any `smart_open`-compatible
  path but you can't pull from them)
* Add tests for local filesystem remotes

* Update pathy for general BlobStat sorting

* Add import

* Remove _file_exists since only Pathy remotes are supported

* Format CLI docs

* Clean up merge
2022-11-29 11:40:58 +01:00
Adriane Boyd 681ec20914
Add smart_open requirement, update deprecated options (#11864)
* Switch from deprecated `ignore_ext` to `compression`
* Add upload/download test for local files
2022-11-25 13:00:57 +01:00
Paul O'Leary McCann b76222e56a
Raise Typer limit (#11720)
* Raise typer limit to <0.7.0

* Raise limit to <0.8.0
2022-11-07 08:11:55 +01:00
Adriane Boyd 6b5a3e7219
Extend to pydantic v1.10 (#11635)
* Update types in `spacy.schemas` for updated pydantic+mypy
2022-10-14 08:16:49 +02:00
Adriane Boyd 6be6913ba5
Update cupy extras (#11279)
* Update cupy extras:

* Extend to v11
* Add `cupy-cuda11x` and `cupy-wheel`
* Update quickstart to use `cupy-wheel` for CUDA 10.2+

* Rename cuda-wheel to cuda-autodetect, remove repeated CUDA in menu
2022-09-13 09:04:53 +02:00
Edward 6723d76f24
Add ConsoleLogger.v2 (#11214)
* Init

* Change logger to ConsoleLogger.v2

* adjust naming

* More naming adjustments

* Fix output_file reference error

* ignore type

* Add basic test for logger

* Hopefully fix mypy issue

* mypy ignore line

* Update mypy line

Co-authored-by: Adriane Boyd <adrianeboyd@gmail.com>

* Update test method name

Co-authored-by: Adriane Boyd <adrianeboyd@gmail.com>

* Change file saving logic

* Fix finalize method

* increase spacy-legacy version in requirements

* Update docs

* small adjustments

Co-authored-by: Adriane Boyd <adrianeboyd@gmail.com>
2022-08-29 10:23:05 +02:00
Paul O'Leary McCann 7a2c58864c
Move deps outside explosion to "third-party" (#11381) 2022-08-26 10:23:10 +02:00
Paul O'Leary McCann 2d89dd9db8
Update natto-py version spec (#11222)
* Update natto-py version spec

* Update setup.cfg

Co-authored-by: Adriane Boyd <adrianeboyd@gmail.com>

Co-authored-by: Adriane Boyd <adrianeboyd@gmail.com>
2022-07-28 07:45:02 +02:00
Adriane Boyd 66d6461c8f
Use thinc v8.1 (#11101) 2022-07-08 17:52:41 +02:00
Adriane Boyd 3bc1fe0a78
Update cupy extras (#11055)
* Add cuda116 and cuda117 extras

* Revert "remove `cuda116` extra from install widget (#11012)"

This reverts commit e7b498fb1f.

* Add cuda117 to quickstart
2022-06-30 11:24:37 +02:00
Adriane Boyd d4e3f43639
Update thinc version to switch back to blis v0.7 (#11014) 2022-06-23 09:50:25 +02:00
Daniël de Kok 0271306f16
Use thinc-apple-ops>=0.1.0.dev0 with `apple` extras (#10904)
* Use thinc-apple-ops>=0.1.0.dev0 with `apple` extras

Also test with thinc-apple-ops that is at least 0.1.0.dev0.

* Check thinc-apple-ops on macOS with Python 3.10

Co-authored-by: Adriane Boyd <adrianeboyd@gmail.com>

* Use `pip install --pre` for installing thinc-apple-ops in CI

Co-authored-by: Adriane Boyd <adrianeboyd@gmail.com>
2022-06-21 08:26:59 +02:00
Daniël de Kok 3d3fbeda9f
Update for CBlas changes in Thinc 8.1.0.dev2 (#10970) 2022-06-16 11:42:34 +02:00
Adriane Boyd 430592b3ce
Extend typing_extensions to <4.2.0 (#10899) 2022-06-02 17:22:34 +02:00
Daniël de Kok 85dd2b6c04
Parser: use C saxpy/sgemm provided by the Ops implementation (#10773)
* Parser: use C saxpy/sgemm provided by the Ops implementation

This is a backport of https://github.com/explosion/spaCy/pull/10747
from the parser refactor branch. It eliminates the explicit calls
to BLIS, instead using the saxpy/sgemm provided by the Ops
implementation.

This allows us to use Accelerate in the parser on M1 Macs (with
an updated thinc-apple-ops).

Performance of the de_core_news_lg pipe:

BLIS 0.7.0, no thinc-apple-ops:  6385 WPS
BLIS 0.7.0, thinc-apple-ops:    36455 WPS
BLIS 0.9.0, no thinc-apple-ops: 19188 WPS
BLIS 0.9.0, thinc-apple-ops:    36682 WPS
This PR, thinc-apple-ops:       38726 WPS

Performance of the de_core_news_lg pipe (only tok2vec -> parser):

BLIS 0.7.0, no thinc-apple-ops: 13907 WPS
BLIS 0.7.0, thinc-apple-ops:    73172 WPS
BLIS 0.9.0, no thinc-apple-ops: 41576 WPS
BLIS 0.9.0, thinc-apple-ops:    72569 WPS
This PR, thinc-apple-ops:       87061 WPS

* Require thinc >=8.1.0,<8.2.0

* Lower thinc lowerbound to 8.1.0.dev0

* Use best CPU ops for CBLAS when the parser model is on the GPU

* Fix another unguarded cblas() call

* Fix: use ops as a shorthand for self.model.ops

Co-authored-by: Madeesh Kannan <shadeMe@users.noreply.github.com>

Co-authored-by: Madeesh Kannan <shadeMe@users.noreply.github.com>
2022-05-27 11:20:52 +02:00
Richard Hudson 32954c3bcb
Fix issues for Mypy 0.950 and Pydantic 1.9.0 (#10786)
* Make changes to typing

* Correction

* Format with black

* Corrections based on review

* Bumped Thinc dependency version

* Bumped blis requirement

* Correction for older Python versions

* Update spacy/ml/models/textcat.py

Co-authored-by: Daniël de Kok <me@github.danieldk.eu>

* Corrections based on review feedback

* Readd deleted docstring line

Co-authored-by: Daniël de Kok <me@github.danieldk.eu>
2022-05-25 09:33:54 +02:00