Commit Graph

1441 Commits

Author SHA1 Message Date
Ines Montani afe4a428f7
Fix pipeline analysis on remove pipe (#4557)
Validate *after* component is removed, not before
2019-10-30 19:04:17 +01:00
Ines Montani 85f2b04c45
Support span._. in component decorator attrs (#4555)
* Support span._. in component decorator attrs

* Adjust error [ci skip]
2019-10-30 17:19:36 +01:00
Matthew Honnibal a927b3a21e Put new alignment behind flag for v2.2.2 release (#4541)
* Xfail new tokenization test

* Put new alignment behind feature flag

* Move USE_ALIGN to top of the file [ci skip]


Co-authored-by: Ines Montani <ines@ines.io>
2019-10-28 16:12:32 +01:00
Ines Montani a90025b277
Fix serialization of extension attr values in DocBin (#4540) 2019-10-28 16:02:13 +01:00
tamuhey df293f3894 modified gold.align to handle space tokens (#4537)
Co-authored-by: Matthew Honnibal <honnibal+gh@gmail.com>
2019-10-28 15:44:28 +01:00
adrianeboyd f2bfaa1b38 Filter subtoken matches in merge_subtokens() (#4539)
The `Matcher` in `merge_subtokens()` returns all possible subsequences
of `subtok`, so for sequences of two or more subtoks it's necessary to
filter the matches so that the retokenizer is only merging the longest
matches with no overlapping spans.
2019-10-28 15:40:28 +01:00
Ines Montani 96bb8f2187 Add regression test for #4528 [ci skip] 2019-10-28 14:36:03 +01:00
Ines Montani c5e41247e8 Tidy up and auto-format 2019-10-28 12:43:55 +01:00
Matthw Honnibal 426b745640 Fix tests for gpu 2019-10-27 22:19:18 +01:00
Sofie Van Landeghem 8e7414dace Match pop with append for training format (#4516)
* trying to fix script - not succesful yet

* match pop() with extend() to avoid changing the data

* few more pop-extend fixes

* reinsert deleted print statement

* fix print statement

* add last tested version

* append instead of extend

* add in few comments

* quick fix for 4402 + unit test

* fixing number of docs (not counting cats)

* more fixes

* fix len

* print tmp file instead of using data from examples dir

* print tmp file instead of using data from examples dir (2)
2019-10-27 16:01:32 +01:00
tamuhey fcd25db033 [#4529] fix: gold pyx (#4530)
* fix: gold pyx

* remove print

* skip test in python2

* Add unicode declarations and don't skip test on Python 2
2019-10-27 13:50:07 +01:00
tamuhey 554850206c [#4525] fix gold.align (#4526)
* fix: gold.align

* fix align

* remove old align
2019-10-27 13:38:04 +01:00
Ines Montani a9c6104047 Component decorator and component analysis (#4517)
* Add work in progress

* Update analysis helpers and component decorator

* Fix porting of docstrings for Python 2

* Fix docstring stuff on Python 2

* Support meta factories when loading model

* Put auto pipeline analysis behind flag for now

* Analyse pipes on remove_pipe and replace_pipe

* Move analysis to root for now

Try to find a better place for it, but it needs to go for now to avoid circular imports

* Simplify decorator

Don't return a wrapped class and instead just write to the object

* Update existing components and factories

* Add condition in factory for classes vs. functions

* Add missing from_nlp classmethods

* Add "retokenizes" to printed overview

* Update assigns/requires declarations of builtins

* Only return data if no_print is enabled

* Use multiline table for overview

* Don't support Span

* Rewrite errors/warnings and move them to spacy.errors
2019-10-27 13:35:49 +01:00
Ines Montani cfffdba7b1 Implement new API for {Phrase}Matcher.add (backwards-compatible) (#4522)
* Implement new API for {Phrase}Matcher.add (backwards-compatible)

* Update docs

* Also update DependencyMatcher.add

* Update internals

* Rewrite tests to use new API

* Add basic check for common mistake

Raise error with suggestion if user likely passed in a pattern instead of a list of patterns

* Fix typo [ci skip]
2019-10-25 22:21:08 +02:00
Ines Montani d2da117114 Also support passing list to Language.disable_pipes (#4521)
* Also support passing list to Language.disable_pipes

* Adjust internals
2019-10-25 16:19:08 +02:00
Ines Montani cc05d9dad6 Auto-format [ci skip] 2019-10-24 16:21:08 +02:00
Ines Montani 73dc63d3bf Tidy up and auto-format [ci skip] 2019-10-24 16:20:48 +02:00
Ines Montani 9a849fe54e Explicitly catch warning in test 2019-10-24 16:16:27 +02:00
adrianeboyd 8516e9d53b Support train dict format as JSONL (#4471)
* Support train dict format as JSONL

* Add (overly simple) check for dict vs. tuple to read JSONL lines as
either train dicts or train tuples

* Extend JSON/JSONL roundtrip conversion tests using `docs_to_json()`
and `GoldCorpus.train_tuples`

* Revert docs to default JSON output with convert
2019-10-23 16:01:44 +02:00
Matthew Honnibal 9489c5f6b2 Clip most_similar to range [-1, 1] (fixes #4506) (#4507)
* Clip most_similar to range [-1, 1]

* Add/fix vectors tests

* Fix test
2019-10-22 20:10:42 +02:00
Ines Montani 74a19aeb1c Add xfailing test [ci skip] 2019-10-22 18:18:43 +02:00
gustavengstrom 050e2445a8 Adding noun_chunks to the Swedish language model (sv) (#4422)
* Create syntax_iterators.py

Replica of spacy/lang/fr/syntax_iterators.py

* Added import statements for SYNTAX_ITERATORS

* Create gustavengstrom.md

* Added "dobj" to list of labels in noun_chunks method and a test_noun_chunks method to the  Swedish language model.

* Delete README-checkpoint.md


Co-authored-by: Gustav <gustav@davcon.se>
Co-authored-by: Ines Montani <ines@ines.io>
2019-10-21 12:57:06 +02:00
adrianeboyd f5c551a43a Checks/errors related to ill-formed IOB input in CLI convert and debug-data (#4487)
* Error for ill-formed input to iob_to_biluo()

Check for empty label in iob_to_biluo(), which can result from
ill-formed input.

* Check for empty NER label in debug-data
2019-10-21 12:20:28 +02:00
Sofie Van Landeghem d5d55312b2 prevent division by zero in most_similar method (#4488) 2019-10-21 12:04:46 +02:00
Ines Montani 181c01f629 Tidy up and auto-format 2019-10-18 11:27:38 +02:00
Daniel King e646956176 Most similar bug (#4446)
* Add batch size indexing

* Don't sort if n == 1

* Add test for most similar vectors issue

* Change > to >=
2019-10-16 23:18:55 +02:00
adrianeboyd 275c9ad872 Allow int values in token patterns (#4444)
* Add missing int value option to top-level pattern validation in Matcher

* Adjust existing tests accordingly

* Add new test for valid pattern `{"LENGTH": int}`
2019-10-16 13:40:18 +02:00
Sofie Van Landeghem 7d1efac4eb Fix remove pattern from matcher (#4454)
* raise specific error when removing a matcher rule that doesn't exist

* rephrasing

* bugfix in remove matcher + extended unit test
2019-10-16 13:34:58 +02:00
Sofie Van Landeghem 2d249a9502 KB extensions and better parsing of WikiData (#4375)
* fix overflow error on windows

* more documentation & logging fixes

* md fix

* 3 different limit parameters to play with execution time

* bug fixes directory locations

* small fixes

* exclude dev test articles from prior probabilities stats

* small fixes

* filtering wikidata entities, removing numeric and meta items

* adding aliases from wikidata also to the KB

* fix adding WD aliases

* adding also new aliases to previously added entities

* fixing comma's

* small doc fixes

* adding subclassof filtering

* append alias functionality in KB

* prevent appending the same entity-alias pair

* fix for appending WD aliases

* remove date filter

* remove unnecessary import

* small corrections and reformatting

* remove WD aliases for now (too slow)

* removing numeric entities from training and evaluation

* small fixes

* shortcut during prediction if there is only one candidate

* add counts and fscore logging, remove FP NER from evaluation

* fix entity_linker.predict to take docs instead of single sentences

* remove enumeration sentences from the WP dataset

* entity_linker.update to process full doc instead of single sentence

* spelling corrections and dump locations in readme

* NLP IO fix

* reading KB is unnecessary at the end of the pipeline

* small logging fix

* remove empty files
2019-10-14 12:28:53 +02:00
Peter Gilles 428887b8f2 Initial commit: New language Luxembourgish (lb) (#4424)
* new language: Luxembourgish (lb)

* update

* update

* Update and rename .github/CONTRIBUTOR_AGREEMENT.md to .github/contributors/PeterGilles.md

* Update and rename .github/contributors/PeterGilles.md to .github/CONTRIBUTOR_AGREEMENT.md

* Update norm_exceptions.py

* Delete README.md

* moved test_lemma.py

* deactivated 'lemma_lookup = LOOKUP'

* update

* Update conftest.py

* update

* tests updated

* import unicode_literals

* Update spacy/tests/lang/lb/test_text.py

Co-Authored-By: Ines Montani <ines@ines.io>

* Create PeterGilles.md
2019-10-14 12:27:50 +02:00
adrianeboyd 98a961a60e Fix PhraseMatcher.remove for overlapping patterns (#4437) 2019-10-14 12:19:51 +02:00
adrianeboyd 6f54e59fe7 Fix util.filter_spans() to prefer first span in overlapping sam… (#4414)
* Update util.filter_spans() to prefer earlier spans

* Add filter_spans test for first same-length span

* Update entity relation example to refer to util.filter_spans()
2019-10-10 17:00:03 +02:00
Sofie Van Landeghem 5efae495f1 Error when removing a matcher rule that doesn't exist (#4420)
* raise specific error when removing a matcher rule that doesn't exist

* rephrasing
2019-10-10 14:01:53 +02:00
Matthew Honnibal ddd6fda59c Add registry for model creation functions ('architectures') (#4395)
* Add architecture registry

* Add test for arch registry

* Add error for model architectures
2019-10-08 12:21:03 +02:00
tamuhey 650cbfe82d multiprocessing pipe (#1303) (#4371)
* refactor: separate formatting docs and golds in Language.update

* fix return typo

* add pipe test

* unpickleable object cannot be assigned to p.map

* passed test pipe

* passed test!

* pipe terminate

* try pipe

* passed test

* fix ch

* add comments

* fix len(texts)

* add comment

* add comment

* fix: multiprocessing of pipe is not supported in 2

* test: use assert_docs_equal

* fix: is_python3 -> is_python2

* fix: change _pipe arg to use functools.partial

* test: add vector modification test

* test: add sample ner_pipe and user_data pipe

* add warnings test

* test: fix user warnings

* test: fix warnings capture

* fix: remove islice import

* test: remove warnings test

* test: add stream test

* test: rename

* fix: multiproc stream

* fix: stream pipe

* add comment

* mp.Pipe seems to be able to use with relative small data

* test: skip stream test in python2

* sort imports

* test: add reason to skiptest

* fix: use pipe for docs communucation

* add comments

* add comment
2019-10-08 12:20:55 +02:00
adrianeboyd 14841d0aa6 Fix PhraseMatcher callback and add tests (#4399)
* Fix callback lookup in PhraseMatcher (string key rather than hash key)
* Add callback tests for Matcher and PhraseMatcher
2019-10-08 12:07:02 +02:00
adrianeboyd a3509f67d4 Extend unicode character block for Sinhala (#4378)
* Extend unicode character block for Sinhala

* Add sentencizer tests for more languages
2019-10-07 13:17:03 +02:00
adrianeboyd cbc2cee2c8 Improve URL_PATTERN and handling in tokenizer (#4374)
* Move prefix and suffix detection for URL_PATTERN

Move prefix and suffix detection for `URL_PATTERN` into the tokenizer.
Remove associated lookahead and lookbehind from `URL_PATTERN`.

Fix tokenization for Hungarian given new modified handling of prefixes
and suffixes.

* Match a wider range of URI schemes
2019-10-05 13:00:09 +02:00
Ines Montani fec9433044 Make PhraseMatcher.vocab consistent with Matcher.vocab (closes #4373) 2019-10-04 12:18:41 +02:00
Sofie Van Landeghem 4e7259c6cf Bugfix initializing DocBin with attributes (#4368)
* docbin init fix + documentation fix + unit tests

* newline

* try with zlib instead of gzip (python 2 incompatibilities)
2019-10-03 14:48:45 +02:00
Ben Taylor 1db79a33cb most_similar() return the k most similar vectors (#4364)
* most_similar return n-most similar vectors

* updated most_similar comment

* add bintay contributor agreement

* sign bintay contributor agreement

* fix most_similar documentation typo

* fixed error in prune_vectors

* updated prune_vectors test
2019-10-03 14:09:44 +02:00
Sofie Van Landeghem 9d3ce7cba2 Ensure training doesn't crash with empty batches (#4360)
* unit test for previously resolved unflatten issue

* prevent batch of empty docs to cause problems
2019-10-02 12:50:47 +02:00
Ines Montani cf65a80f36 Refactor lemmatizer and data table integration (#4353)
* Move test

* Allow default in Lookups.get_table

* Start with blank tables in Lookups.from_bytes

* Refactor lemmatizer to hold instance of Lookups

* Get lookups table within the lemmatization methods to make sure it references the correct table (even if the table was replaced or modified, e.g. when loading a model from disk)
* Deprecate other arguments on Lemmatizer.__init__ and expect Lookups for consistency
* Remove old and unsupported Lemmatizer.load classmethod
* Refactor language-specific lemmatizers to inherit as much as possible from base class and override only what they need

* Update tests and docs

* Fix more tests

* Fix lemmatizer

* Upgrade pytest to try and fix weird CI errors

* Try pytest 4.6.5
2019-10-01 21:36:03 +02:00
Ines Montani 3297a19545 Warn in Tagger.begin_training if no lemma tables are available (#4351) 2019-10-01 15:13:55 +02:00
Ines Montani e0cf4796a5 Move lookup tables out of the core library (#4346)
* Add default to util.get_entry_point

* Tidy up entry points

* Read lookups from entry points

* Remove lookup tables and related tests

* Add lookups install option

* Remove lemmatizer tests

* Remove logic to process language data files

* Update setup.cfg
2019-10-01 00:01:27 +02:00
Ines Montani 4f905ac9e6 Add test for ASCII filenames (#4345) 2019-09-30 18:45:30 +02:00
Ines Montani f7d1736241 Skip duplicate spans in Doc.retokenize (#4339) 2019-09-30 12:43:48 +02:00
Ines Montani 0226b3bf0e Fix test imports 2019-09-29 17:34:56 +02:00
Ines Montani 3d8fd4b461 Revert #4334 2019-09-29 17:32:12 +02:00
Ines Montani c9cd516d96 Move tests out of package (#4334)
* Move tests out of package

* Fix typo
2019-09-28 18:05:00 +02:00