2020-06-21 19:35:01 +00:00
|
|
|
from typing import Optional, List
|
2017-10-01 19:04:32 +00:00
|
|
|
from timeit import default_timer as timer
|
2020-06-21 19:35:01 +00:00
|
|
|
from wasabi import Printer
|
|
|
|
from pathlib import Path
|
2020-06-27 19:13:11 +00:00
|
|
|
import re
|
|
|
|
import srsly
|
2017-10-01 19:04:32 +00:00
|
|
|
|
2020-06-26 17:34:12 +00:00
|
|
|
from ..gold import Corpus
|
2020-06-21 19:35:01 +00:00
|
|
|
from ..tokens import Doc
|
2020-06-26 17:34:12 +00:00
|
|
|
from ._app import app, Arg, Opt
|
2020-06-21 19:35:01 +00:00
|
|
|
from ..scorer import Scorer
|
2017-10-01 19:04:32 +00:00
|
|
|
from .. import util
|
|
|
|
from .. import displacy
|
2017-10-27 12:38:39 +00:00
|
|
|
|
2017-10-01 19:04:32 +00:00
|
|
|
|
2020-06-21 11:44:00 +00:00
|
|
|
@app.command("evaluate")
|
2020-06-21 19:35:01 +00:00
|
|
|
def evaluate_cli(
|
2020-01-01 12:15:46 +00:00
|
|
|
# fmt: off
|
2020-06-21 11:44:00 +00:00
|
|
|
model: str = Arg(..., help="Model name or path"),
|
2020-06-21 19:35:01 +00:00
|
|
|
data_path: Path = Arg(..., help="Location of JSON-formatted evaluation data", exists=True),
|
2020-06-27 19:13:11 +00:00
|
|
|
output: Optional[Path] = Opt(None, "--output", "-o", help="Output JSON file for metrics", dir_okay=False),
|
2020-06-21 11:44:00 +00:00
|
|
|
gpu_id: int = Opt(-1, "--gpu-id", "-g", help="Use GPU"),
|
|
|
|
gold_preproc: bool = Opt(False, "--gold-preproc", "-G", help="Use gold preprocessing"),
|
2020-06-21 19:35:01 +00:00
|
|
|
displacy_path: Optional[Path] = Opt(None, "--displacy-path", "-dp", help="Directory to output rendered parses as HTML", exists=True, file_okay=False),
|
2020-06-21 11:44:00 +00:00
|
|
|
displacy_limit: int = Opt(25, "--displacy-limit", "-dl", help="Limit of parses to render as HTML"),
|
2020-06-27 19:13:11 +00:00
|
|
|
# fmt: on
|
2018-11-30 19:16:14 +00:00
|
|
|
):
|
2017-10-01 19:04:32 +00:00
|
|
|
"""
|
2017-10-27 12:38:39 +00:00
|
|
|
Evaluate a model. To render a sample of parses in a HTML file, set an
|
|
|
|
output directory as the displacy_path argument.
|
2017-10-01 19:04:32 +00:00
|
|
|
"""
|
2020-06-21 19:35:01 +00:00
|
|
|
evaluate(
|
|
|
|
model,
|
|
|
|
data_path,
|
2020-06-27 19:13:11 +00:00
|
|
|
output=output,
|
2020-06-21 19:35:01 +00:00
|
|
|
gpu_id=gpu_id,
|
|
|
|
gold_preproc=gold_preproc,
|
|
|
|
displacy_path=displacy_path,
|
|
|
|
displacy_limit=displacy_limit,
|
|
|
|
silent=False,
|
|
|
|
)
|
|
|
|
|
|
|
|
|
|
|
|
def evaluate(
|
|
|
|
model: str,
|
|
|
|
data_path: Path,
|
2020-06-27 19:13:11 +00:00
|
|
|
output: Optional[Path],
|
2020-06-21 19:35:01 +00:00
|
|
|
gpu_id: int = -1,
|
|
|
|
gold_preproc: bool = False,
|
|
|
|
displacy_path: Optional[Path] = None,
|
|
|
|
displacy_limit: int = 25,
|
|
|
|
silent: bool = True,
|
|
|
|
) -> Scorer:
|
|
|
|
msg = Printer(no_print=silent, pretty=not silent)
|
2018-02-13 11:42:23 +00:00
|
|
|
util.fix_random_seed()
|
2017-10-06 18:17:47 +00:00
|
|
|
if gpu_id >= 0:
|
|
|
|
util.use_gpu(gpu_id)
|
2017-10-03 20:47:31 +00:00
|
|
|
util.set_env_log(False)
|
2017-10-01 19:04:32 +00:00
|
|
|
data_path = util.ensure_path(data_path)
|
2020-06-27 19:13:11 +00:00
|
|
|
output_path = util.ensure_path(output)
|
2017-10-03 22:03:15 +00:00
|
|
|
displacy_path = util.ensure_path(displacy_path)
|
2017-10-01 19:04:32 +00:00
|
|
|
if not data_path.exists():
|
2018-12-08 10:49:43 +00:00
|
|
|
msg.fail("Evaluation data not found", data_path, exits=1)
|
2017-10-03 22:03:15 +00:00
|
|
|
if displacy_path and not displacy_path.exists():
|
2018-12-08 10:49:43 +00:00
|
|
|
msg.fail("Visualization output directory not found", displacy_path, exits=1)
|
2020-06-26 17:34:12 +00:00
|
|
|
corpus = Corpus(data_path, data_path)
|
2020-06-27 19:16:57 +00:00
|
|
|
nlp = util.load_model(model)
|
2019-11-11 16:35:27 +00:00
|
|
|
dev_dataset = list(corpus.dev_dataset(nlp, gold_preproc=gold_preproc))
|
2017-10-03 14:15:35 +00:00
|
|
|
begin = timer()
|
2019-11-11 16:35:27 +00:00
|
|
|
scorer = nlp.evaluate(dev_dataset, verbose=False)
|
2017-10-03 14:15:35 +00:00
|
|
|
end = timer()
|
2020-06-27 19:15:25 +00:00
|
|
|
nwords = sum(len(ex.predicted) for ex in dev_dataset)
|
2018-11-30 19:16:14 +00:00
|
|
|
results = {
|
2019-12-25 16:59:52 +00:00
|
|
|
"Time": f"{end - begin:.2f} s",
|
2018-11-30 19:16:14 +00:00
|
|
|
"Words": nwords,
|
2019-12-25 16:59:52 +00:00
|
|
|
"Words/s": f"{nwords / (end - begin):.0f}",
|
|
|
|
"TOK": f"{scorer.token_acc:.2f}",
|
2020-04-02 12:46:32 +00:00
|
|
|
"TAG": f"{scorer.tags_acc:.2f}",
|
|
|
|
"POS": f"{scorer.pos_acc:.2f}",
|
|
|
|
"MORPH": f"{scorer.morphs_acc:.2f}",
|
2019-12-25 16:59:52 +00:00
|
|
|
"UAS": f"{scorer.uas:.2f}",
|
|
|
|
"LAS": f"{scorer.las:.2f}",
|
|
|
|
"NER P": f"{scorer.ents_p:.2f}",
|
|
|
|
"NER R": f"{scorer.ents_r:.2f}",
|
|
|
|
"NER F": f"{scorer.ents_f:.2f}",
|
2020-06-12 00:02:07 +00:00
|
|
|
"Textcat AUC": f"{scorer.textcat_auc:.2f}",
|
|
|
|
"Textcat F": f"{scorer.textcat_f:.2f}",
|
2019-12-25 16:59:52 +00:00
|
|
|
"Sent P": f"{scorer.sent_p:.2f}",
|
|
|
|
"Sent R": f"{scorer.sent_r:.2f}",
|
|
|
|
"Sent F": f"{scorer.sent_f:.2f}",
|
2018-11-30 19:16:14 +00:00
|
|
|
}
|
|
|
|
msg.table(results, title="Results")
|
|
|
|
|
2017-10-03 22:03:15 +00:00
|
|
|
if displacy_path:
|
2020-06-27 19:15:25 +00:00
|
|
|
docs = [ex.predicted for ex in dev_dataset]
|
2018-11-30 19:16:14 +00:00
|
|
|
render_deps = "parser" in nlp.meta.get("pipeline", [])
|
|
|
|
render_ents = "ner" in nlp.meta.get("pipeline", [])
|
|
|
|
render_parses(
|
|
|
|
docs,
|
|
|
|
displacy_path,
|
|
|
|
model_name=model,
|
|
|
|
limit=displacy_limit,
|
|
|
|
deps=render_deps,
|
|
|
|
ents=render_ents,
|
|
|
|
)
|
2019-12-22 00:53:56 +00:00
|
|
|
msg.good(f"Generated {displacy_limit} parses as HTML", displacy_path)
|
2020-06-27 19:13:11 +00:00
|
|
|
|
|
|
|
data = {re.sub(r"[\s/]", "_", k.lower()): v for k, v in results.items()}
|
|
|
|
if output_path is not None:
|
|
|
|
srsly.write_json(output_path, data)
|
2020-06-27 19:15:13 +00:00
|
|
|
msg.good(f"Saved results to {output_path}")
|
2020-06-27 19:13:11 +00:00
|
|
|
return data
|
2017-10-01 19:04:32 +00:00
|
|
|
|
|
|
|
|
2020-06-21 19:35:01 +00:00
|
|
|
def render_parses(
|
|
|
|
docs: List[Doc],
|
|
|
|
output_path: Path,
|
|
|
|
model_name: str = "",
|
|
|
|
limit: int = 250,
|
|
|
|
deps: bool = True,
|
|
|
|
ents: bool = True,
|
|
|
|
):
|
2018-11-30 19:16:14 +00:00
|
|
|
docs[0].user_data["title"] = model_name
|
2017-10-03 22:03:15 +00:00
|
|
|
if ents:
|
2019-08-18 11:54:26 +00:00
|
|
|
html = displacy.render(docs[:limit], style="ent", page=True)
|
2019-08-18 11:55:34 +00:00
|
|
|
with (output_path / "entities.html").open("w", encoding="utf8") as file_:
|
2017-10-03 22:03:15 +00:00
|
|
|
file_.write(html)
|
|
|
|
if deps:
|
2019-08-18 11:54:26 +00:00
|
|
|
html = displacy.render(
|
|
|
|
docs[:limit], style="dep", page=True, options={"compact": True}
|
|
|
|
)
|
2019-08-18 11:55:34 +00:00
|
|
|
with (output_path / "parses.html").open("w", encoding="utf8") as file_:
|
2017-10-03 22:03:15 +00:00
|
|
|
file_.write(html)
|