2018-07-24 21:38:44 +00:00
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import pytest
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import random
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import numpy.random
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2020-07-06 11:06:25 +00:00
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from thinc.api import fix_random_seed
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2020-02-27 17:42:27 +00:00
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from spacy import util
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from spacy.lang.en import English
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2018-07-24 21:38:44 +00:00
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from spacy.language import Language
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from spacy.pipeline import TextCategorizer
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from spacy.tokens import Doc
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2020-07-22 11:42:59 +00:00
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from spacy.pipeline.tok2vec import DEFAULT_TOK2VEC_MODEL
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2020-09-24 08:31:17 +00:00
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from spacy.scorer import Scorer
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2020-09-28 13:09:59 +00:00
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from spacy.training import Example
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2017-11-06 21:04:29 +00:00
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2020-03-29 17:40:36 +00:00
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from ..util import make_tempdir
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2020-07-06 11:06:25 +00:00
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2020-01-29 16:06:46 +00:00
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TRAIN_DATA = [
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("I'm so happy.", {"cats": {"POSITIVE": 1.0, "NEGATIVE": 0.0}}),
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("I'm so angry", {"cats": {"POSITIVE": 0.0, "NEGATIVE": 1.0}}),
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]
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2017-11-07 00:25:54 +00:00
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2020-10-03 15:07:38 +00:00
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def make_get_examples(nlp):
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train_examples = []
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for t in TRAIN_DATA:
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train_examples.append(Example.from_dict(nlp.make_doc(t[0]), t[1]))
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def get_examples():
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return train_examples
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return get_examples
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2018-08-15 14:56:55 +00:00
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@pytest.mark.skip(reason="Test is flakey when run with others")
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2017-11-06 21:04:29 +00:00
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def test_simple_train():
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nlp = Language()
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2020-07-22 11:42:59 +00:00
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textcat = nlp.add_pipe("textcat")
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textcat.add_label("answer")
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2020-09-28 19:35:09 +00:00
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nlp.initialize()
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2017-11-06 21:04:29 +00:00
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for i in range(5):
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2018-11-27 00:09:36 +00:00
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for text, answer in [
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("aaaa", 1.0),
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("bbbb", 0),
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("aa", 1.0),
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("bbbbbbbbb", 0.0),
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("aaaaaa", 1),
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]:
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2019-11-11 16:35:27 +00:00
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nlp.update((text, {"cats": {"answer": answer}}))
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2018-11-27 00:09:36 +00:00
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doc = nlp("aaa")
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assert "answer" in doc.cats
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assert doc.cats["answer"] >= 0.5
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2018-07-24 21:38:44 +00:00
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@pytest.mark.skip(reason="Test is flakey when run with others")
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def test_textcat_learns_multilabel():
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random.seed(5)
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numpy.random.seed(5)
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docs = []
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nlp = Language()
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2018-11-27 00:09:36 +00:00
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letters = ["a", "b", "c"]
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2018-07-24 21:38:44 +00:00
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for w1 in letters:
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for w2 in letters:
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2018-11-27 00:09:36 +00:00
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cats = {letter: float(w2 == letter) for letter in letters}
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docs.append((Doc(nlp.vocab, words=["d"] * 3 + [w1, w2] + ["d"] * 3), cats))
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2018-07-24 21:38:44 +00:00
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random.shuffle(docs)
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2020-06-26 17:34:12 +00:00
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textcat = TextCategorizer(nlp.vocab, width=8)
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2018-07-24 21:38:44 +00:00
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for letter in letters:
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2020-06-26 17:34:12 +00:00
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textcat.add_label(letter)
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2020-09-28 19:35:09 +00:00
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optimizer = textcat.initialize(lambda: [])
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2018-07-24 21:38:44 +00:00
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for i in range(30):
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losses = {}
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2020-06-26 17:34:12 +00:00
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examples = [Example.from_dict(doc, {"cats": cats}) for doc, cat in docs]
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textcat.update(examples, sgd=optimizer, losses=losses)
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2018-07-24 21:38:44 +00:00
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random.shuffle(docs)
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for w1 in letters:
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for w2 in letters:
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2018-11-27 00:09:36 +00:00
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doc = Doc(nlp.vocab, words=["d"] * 3 + [w1, w2] + ["d"] * 3)
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truth = {letter: w2 == letter for letter in letters}
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2020-06-26 17:34:12 +00:00
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textcat(doc)
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2018-07-24 21:38:44 +00:00
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for cat, score in doc.cats.items():
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if not truth[cat]:
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assert score < 0.5
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else:
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assert score > 0.5
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2019-11-21 15:24:10 +00:00
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def test_label_types():
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nlp = Language()
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2020-07-22 11:42:59 +00:00
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textcat = nlp.add_pipe("textcat")
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textcat.add_label("answer")
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2019-11-21 15:24:10 +00:00
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with pytest.raises(ValueError):
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2020-07-22 11:42:59 +00:00
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textcat.add_label(9)
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2020-01-29 16:06:46 +00:00
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2020-09-08 20:44:25 +00:00
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def test_no_label():
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nlp = Language()
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nlp.add_pipe("textcat")
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with pytest.raises(ValueError):
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2020-09-28 19:35:09 +00:00
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nlp.initialize()
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2020-09-08 20:44:25 +00:00
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def test_implicit_label():
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nlp = Language()
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2020-09-13 08:55:36 +00:00
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nlp.add_pipe("textcat")
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2020-10-03 15:07:38 +00:00
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nlp.initialize(get_examples=make_get_examples(nlp))
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2020-09-08 20:44:25 +00:00
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def test_no_resize():
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nlp = Language()
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textcat = nlp.add_pipe("textcat")
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textcat.add_label("POSITIVE")
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textcat.add_label("NEGATIVE")
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2020-09-28 19:35:09 +00:00
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nlp.initialize()
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2020-09-08 20:44:25 +00:00
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assert textcat.model.get_dim("nO") == 2
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# this throws an error because the textcat can't be resized after initialization
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with pytest.raises(ValueError):
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textcat.add_label("NEUTRAL")
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2020-09-28 19:35:09 +00:00
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def test_initialize_examples():
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2020-09-08 20:44:25 +00:00
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nlp = Language()
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textcat = nlp.add_pipe("textcat")
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for text, annotations in TRAIN_DATA:
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for label, value in annotations.get("cats").items():
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textcat.add_label(label)
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# you shouldn't really call this more than once, but for testing it should be fine
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2020-09-28 19:35:09 +00:00
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nlp.initialize()
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2020-10-03 15:07:38 +00:00
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get_examples = make_get_examples(nlp)
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nlp.initialize(get_examples=get_examples)
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2020-10-08 19:33:49 +00:00
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with pytest.raises(TypeError):
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2020-09-28 19:35:09 +00:00
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nlp.initialize(get_examples=lambda: None)
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2020-10-08 19:33:49 +00:00
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with pytest.raises(TypeError):
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2020-10-03 15:07:38 +00:00
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nlp.initialize(get_examples=get_examples())
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2020-09-08 20:44:25 +00:00
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2020-02-27 17:42:27 +00:00
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def test_overfitting_IO():
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2020-01-29 16:06:46 +00:00
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# Simple test to try and quickly overfit the textcat component - ensuring the ML models work correctly
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2020-04-02 12:46:32 +00:00
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fix_random_seed(0)
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2020-02-27 17:42:27 +00:00
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nlp = English()
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2020-10-03 15:07:38 +00:00
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nlp.config["initialize"]["components"]["textcat"] = {"positive_label": "POSITIVE"}
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Refactor the Scorer to improve flexibility (#5731)
* Refactor the Scorer to improve flexibility
Refactor the `Scorer` to improve flexibility for arbitrary pipeline
components.
* Individual pipeline components provide their own `evaluate` methods
that score a list of `Example`s and return a dictionary of scores
* `Scorer` is initialized either:
* with a provided pipeline containing components to be scored
* with a default pipeline containing the built-in statistical
components (senter, tagger, morphologizer, parser, ner)
* `Scorer.score` evaluates a list of `Example`s and returns a dictionary
of scores referring to the scores provided by the components in the
pipeline
Significant differences:
* `tags_acc` is renamed to `tag_acc` to be consistent with `token_acc`
and the new `morph_acc`, `pos_acc`, and `lemma_acc`
* Scoring is no longer cumulative: `Scorer.score` scores a list of
examples rather than a single example and does not retain any state
about previously scored examples
* PRF values in the returned scores are no longer multiplied by 100
* Add kwargs to Morphologizer.evaluate
* Create generalized scoring methods in Scorer
* Generalized static scoring methods are added to `Scorer`
* Methods require an attribute (either on Token or Doc) that is
used to key the returned scores
Naming differences:
* `uas`, `las`, and `las_per_type` in the scores dict are renamed to
`dep_uas`, `dep_las`, and `dep_las_per_type`
Scoring differences:
* `Doc.sents` is now scored as spans rather than on sentence-initial
token positions so that `Doc.sents` and `Doc.ents` can be scored with
the same method (this lowers scores since a single incorrect sentence
start results in two incorrect spans)
* Simplify / extend hasattr check for eval method
* Add hasattr check to tokenizer scoring
* Simplify to hasattr check for component scoring
* Reset Example alignment if docs are set
Reset the Example alignment if either doc is set in case the
tokenization has changed.
* Add PRF tokenization scoring for tokens as spans
Add PRF scores for tokens as character spans. The scores are:
* token_acc: # correct tokens / # gold tokens
* token_p/r/f: PRF for (token.idx, token.idx + len(token))
* Add docstring to Scorer.score_tokenization
* Rename component.evaluate() to component.score()
* Update Scorer API docs
* Update scoring for positive_label in textcat
* Fix TextCategorizer.score kwargs
* Update Language.evaluate docs
* Update score names in default config
2020-07-25 10:53:02 +00:00
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# Set exclusive labels
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2020-10-03 15:20:18 +00:00
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config = {"model": {"exclusive_classes": True}}
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textcat = nlp.add_pipe("textcat", config=config)
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2020-07-06 11:02:36 +00:00
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train_examples = []
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for text, annotations in TRAIN_DATA:
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train_examples.append(Example.from_dict(nlp.make_doc(text), annotations))
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2020-09-28 19:35:09 +00:00
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optimizer = nlp.initialize(get_examples=lambda: train_examples)
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2020-09-08 20:44:25 +00:00
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assert textcat.model.get_dim("nO") == 2
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2020-10-08 19:33:49 +00:00
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assert textcat._added_strings == {"NEGATIVE", "POSITIVE"}
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2020-01-29 16:06:46 +00:00
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for i in range(50):
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losses = {}
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2020-07-06 11:02:36 +00:00
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nlp.update(train_examples, sgd=optimizer, losses=losses)
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2020-02-27 17:42:27 +00:00
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assert losses["textcat"] < 0.01
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2020-01-29 16:06:46 +00:00
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# test the trained model
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test_text = "I am happy."
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doc = nlp(test_text)
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cats = doc.cats
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2020-09-02 11:07:41 +00:00
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assert cats["POSITIVE"] > 0.9
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assert cats["POSITIVE"] + cats["NEGATIVE"] == pytest.approx(1.0, 0.001)
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2020-02-27 17:42:27 +00:00
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# Also test the results are still the same after IO
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with make_tempdir() as tmp_dir:
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nlp.to_disk(tmp_dir)
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nlp2 = util.load_model_from_path(tmp_dir)
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doc2 = nlp2(test_text)
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cats2 = doc2.cats
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2020-09-02 11:07:41 +00:00
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assert cats2["POSITIVE"] > 0.9
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assert cats2["POSITIVE"] + cats2["NEGATIVE"] == pytest.approx(1.0, 0.001)
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2020-10-08 19:33:49 +00:00
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assert nlp2.get_pipe("textcat")._added_strings == {"NEGATIVE", "POSITIVE"}
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2020-03-29 17:40:36 +00:00
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Refactor the Scorer to improve flexibility (#5731)
* Refactor the Scorer to improve flexibility
Refactor the `Scorer` to improve flexibility for arbitrary pipeline
components.
* Individual pipeline components provide their own `evaluate` methods
that score a list of `Example`s and return a dictionary of scores
* `Scorer` is initialized either:
* with a provided pipeline containing components to be scored
* with a default pipeline containing the built-in statistical
components (senter, tagger, morphologizer, parser, ner)
* `Scorer.score` evaluates a list of `Example`s and returns a dictionary
of scores referring to the scores provided by the components in the
pipeline
Significant differences:
* `tags_acc` is renamed to `tag_acc` to be consistent with `token_acc`
and the new `morph_acc`, `pos_acc`, and `lemma_acc`
* Scoring is no longer cumulative: `Scorer.score` scores a list of
examples rather than a single example and does not retain any state
about previously scored examples
* PRF values in the returned scores are no longer multiplied by 100
* Add kwargs to Morphologizer.evaluate
* Create generalized scoring methods in Scorer
* Generalized static scoring methods are added to `Scorer`
* Methods require an attribute (either on Token or Doc) that is
used to key the returned scores
Naming differences:
* `uas`, `las`, and `las_per_type` in the scores dict are renamed to
`dep_uas`, `dep_las`, and `dep_las_per_type`
Scoring differences:
* `Doc.sents` is now scored as spans rather than on sentence-initial
token positions so that `Doc.sents` and `Doc.ents` can be scored with
the same method (this lowers scores since a single incorrect sentence
start results in two incorrect spans)
* Simplify / extend hasattr check for eval method
* Add hasattr check to tokenizer scoring
* Simplify to hasattr check for component scoring
* Reset Example alignment if docs are set
Reset the Example alignment if either doc is set in case the
tokenization has changed.
* Add PRF tokenization scoring for tokens as spans
Add PRF scores for tokens as character spans. The scores are:
* token_acc: # correct tokens / # gold tokens
* token_p/r/f: PRF for (token.idx, token.idx + len(token))
* Add docstring to Scorer.score_tokenization
* Rename component.evaluate() to component.score()
* Update Scorer API docs
* Update scoring for positive_label in textcat
* Fix TextCategorizer.score kwargs
* Update Language.evaluate docs
* Update score names in default config
2020-07-25 10:53:02 +00:00
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# Test scoring
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2020-09-14 15:08:00 +00:00
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scores = nlp.evaluate(train_examples)
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2020-08-06 14:24:13 +00:00
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assert scores["cats_micro_f"] == 1.0
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2020-07-27 09:17:52 +00:00
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assert scores["cats_score"] == 1.0
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assert "cats_score_desc" in scores
|
Refactor the Scorer to improve flexibility (#5731)
* Refactor the Scorer to improve flexibility
Refactor the `Scorer` to improve flexibility for arbitrary pipeline
components.
* Individual pipeline components provide their own `evaluate` methods
that score a list of `Example`s and return a dictionary of scores
* `Scorer` is initialized either:
* with a provided pipeline containing components to be scored
* with a default pipeline containing the built-in statistical
components (senter, tagger, morphologizer, parser, ner)
* `Scorer.score` evaluates a list of `Example`s and returns a dictionary
of scores referring to the scores provided by the components in the
pipeline
Significant differences:
* `tags_acc` is renamed to `tag_acc` to be consistent with `token_acc`
and the new `morph_acc`, `pos_acc`, and `lemma_acc`
* Scoring is no longer cumulative: `Scorer.score` scores a list of
examples rather than a single example and does not retain any state
about previously scored examples
* PRF values in the returned scores are no longer multiplied by 100
* Add kwargs to Morphologizer.evaluate
* Create generalized scoring methods in Scorer
* Generalized static scoring methods are added to `Scorer`
* Methods require an attribute (either on Token or Doc) that is
used to key the returned scores
Naming differences:
* `uas`, `las`, and `las_per_type` in the scores dict are renamed to
`dep_uas`, `dep_las`, and `dep_las_per_type`
Scoring differences:
* `Doc.sents` is now scored as spans rather than on sentence-initial
token positions so that `Doc.sents` and `Doc.ents` can be scored with
the same method (this lowers scores since a single incorrect sentence
start results in two incorrect spans)
* Simplify / extend hasattr check for eval method
* Add hasattr check to tokenizer scoring
* Simplify to hasattr check for component scoring
* Reset Example alignment if docs are set
Reset the Example alignment if either doc is set in case the
tokenization has changed.
* Add PRF tokenization scoring for tokens as spans
Add PRF scores for tokens as character spans. The scores are:
* token_acc: # correct tokens / # gold tokens
* token_p/r/f: PRF for (token.idx, token.idx + len(token))
* Add docstring to Scorer.score_tokenization
* Rename component.evaluate() to component.score()
* Update Scorer API docs
* Update scoring for positive_label in textcat
* Fix TextCategorizer.score kwargs
* Update Language.evaluate docs
* Update score names in default config
2020-07-25 10:53:02 +00:00
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2020-03-29 17:40:36 +00:00
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# fmt: off
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@pytest.mark.parametrize(
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"textcat_config",
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[
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{"@architectures": "spacy.TextCatBOW.v1", "exclusive_classes": False, "ngram_size": 1, "no_output_layer": False},
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{"@architectures": "spacy.TextCatBOW.v1", "exclusive_classes": True, "ngram_size": 4, "no_output_layer": False},
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{"@architectures": "spacy.TextCatBOW.v1", "exclusive_classes": False, "ngram_size": 3, "no_output_layer": True},
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{"@architectures": "spacy.TextCatBOW.v1", "exclusive_classes": True, "ngram_size": 2, "no_output_layer": True},
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2020-07-26 13:11:43 +00:00
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{"@architectures": "spacy.TextCatEnsemble.v1", "exclusive_classes": False, "ngram_size": 1, "pretrained_vectors": False, "width": 64, "conv_depth": 2, "embed_size": 2000, "window_size": 2, "dropout": None},
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{"@architectures": "spacy.TextCatEnsemble.v1", "exclusive_classes": True, "ngram_size": 5, "pretrained_vectors": False, "width": 128, "conv_depth": 2, "embed_size": 2000, "window_size": 1, "dropout": None},
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{"@architectures": "spacy.TextCatEnsemble.v1", "exclusive_classes": True, "ngram_size": 2, "pretrained_vectors": False, "width": 32, "conv_depth": 3, "embed_size": 500, "window_size": 3, "dropout": None},
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2020-07-22 11:42:59 +00:00
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{"@architectures": "spacy.TextCatCNN.v1", "tok2vec": DEFAULT_TOK2VEC_MODEL, "exclusive_classes": True},
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{"@architectures": "spacy.TextCatCNN.v1", "tok2vec": DEFAULT_TOK2VEC_MODEL, "exclusive_classes": False},
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2020-03-29 17:40:36 +00:00
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],
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)
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# fmt: on
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def test_textcat_configs(textcat_config):
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pipe_config = {"model": textcat_config}
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nlp = English()
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2020-07-22 11:42:59 +00:00
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textcat = nlp.add_pipe("textcat", config=pipe_config)
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2020-07-06 11:02:36 +00:00
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train_examples = []
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for text, annotations in TRAIN_DATA:
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train_examples.append(Example.from_dict(nlp.make_doc(text), annotations))
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2020-03-29 17:40:36 +00:00
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for label, value in annotations.get("cats").items():
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textcat.add_label(label)
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2020-09-28 19:35:09 +00:00
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optimizer = nlp.initialize()
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2020-03-29 17:40:36 +00:00
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for i in range(5):
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losses = {}
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2020-07-06 11:02:36 +00:00
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nlp.update(train_examples, sgd=optimizer, losses=losses)
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2020-09-14 15:08:00 +00:00
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def test_positive_class():
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nlp = English()
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2020-10-03 15:07:38 +00:00
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textcat = nlp.add_pipe("textcat")
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get_examples = make_get_examples(nlp)
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textcat.initialize(get_examples, labels=["POS", "NEG"], positive_label="POS")
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2020-09-14 15:08:00 +00:00
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assert textcat.labels == ("POS", "NEG")
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def test_positive_class_not_present():
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nlp = English()
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2020-10-03 15:07:38 +00:00
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textcat = nlp.add_pipe("textcat")
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get_examples = make_get_examples(nlp)
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2020-09-14 15:08:00 +00:00
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with pytest.raises(ValueError):
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2020-10-03 15:07:38 +00:00
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textcat.initialize(get_examples, labels=["SOME", "THING"], positive_label="POS")
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2020-09-14 15:08:00 +00:00
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def test_positive_class_not_binary():
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nlp = English()
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2020-10-03 15:07:38 +00:00
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textcat = nlp.add_pipe("textcat")
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get_examples = make_get_examples(nlp)
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2020-09-14 15:08:00 +00:00
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with pytest.raises(ValueError):
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2020-10-03 15:20:18 +00:00
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textcat.initialize(
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get_examples, labels=["SOME", "THING", "POS"], positive_label="POS"
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)
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2020-09-24 08:31:17 +00:00
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2020-09-29 19:39:28 +00:00
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2020-09-24 08:31:17 +00:00
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def test_textcat_evaluation():
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train_examples = []
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nlp = English()
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ref1 = nlp("one")
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ref1.cats = {"winter": 1.0, "summer": 1.0, "spring": 1.0, "autumn": 1.0}
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pred1 = nlp("one")
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pred1.cats = {"winter": 1.0, "summer": 0.0, "spring": 1.0, "autumn": 1.0}
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train_examples.append(Example(pred1, ref1))
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ref2 = nlp("two")
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ref2.cats = {"winter": 0.0, "summer": 0.0, "spring": 1.0, "autumn": 1.0}
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pred2 = nlp("two")
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pred2.cats = {"winter": 1.0, "summer": 0.0, "spring": 0.0, "autumn": 1.0}
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train_examples.append(Example(pred2, ref2))
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2020-09-29 19:39:28 +00:00
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scores = Scorer().score_cats(
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train_examples, "cats", labels=["winter", "summer", "spring", "autumn"]
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)
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assert scores["cats_f_per_type"]["winter"]["p"] == 1 / 2
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assert scores["cats_f_per_type"]["winter"]["r"] == 1 / 1
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2020-09-24 08:31:17 +00:00
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assert scores["cats_f_per_type"]["summer"]["p"] == 0
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2020-09-29 19:39:28 +00:00
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assert scores["cats_f_per_type"]["summer"]["r"] == 0 / 1
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assert scores["cats_f_per_type"]["spring"]["p"] == 1 / 1
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assert scores["cats_f_per_type"]["spring"]["r"] == 1 / 2
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assert scores["cats_f_per_type"]["autumn"]["p"] == 2 / 2
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assert scores["cats_f_per_type"]["autumn"]["r"] == 2 / 2
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assert scores["cats_micro_p"] == 4 / 5
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assert scores["cats_micro_r"] == 4 / 6
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