2021-05-17 14:54:23 +00:00
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import numpy
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2023-06-14 15:48:41 +00:00
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import pytest
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2021-05-17 14:54:23 +00:00
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from numpy.testing import assert_array_equal
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2023-06-14 15:48:41 +00:00
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from thinc.api import get_current_ops
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2021-12-04 19:34:48 +00:00
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2023-06-14 15:48:41 +00:00
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from spacy.attrs import LENGTH, ORTH
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2021-12-04 19:34:48 +00:00
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from spacy.lang.en import English
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2021-03-30 07:49:12 +00:00
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from spacy.tokens import Doc, Span, Token
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2019-05-08 00:33:40 +00:00
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from spacy.util import filter_spans
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2023-06-14 15:48:41 +00:00
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from spacy.vocab import Vocab
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2018-07-24 21:38:44 +00:00
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2021-09-20 18:22:49 +00:00
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from ..util import add_vecs_to_vocab
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2021-03-30 07:49:12 +00:00
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from .test_underscore import clean_underscore # noqa: F401
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2015-04-07 02:52:25 +00:00
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@pytest.fixture
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2017-01-12 14:30:49 +00:00
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def doc(en_tokenizer):
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2018-11-27 00:09:36 +00:00
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# fmt: off
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2017-01-12 14:30:49 +00:00
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text = "This is a sentence. This is another sentence. And a third."
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2020-09-21 18:43:54 +00:00
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heads = [1, 1, 3, 1, 1, 6, 6, 8, 6, 6, 12, 12, 12, 12]
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2018-11-27 00:09:36 +00:00
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deps = ["nsubj", "ROOT", "det", "attr", "punct", "nsubj", "ROOT", "det",
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"attr", "punct", "ROOT", "det", "npadvmod", "punct"]
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2021-05-11 15:10:16 +00:00
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ents = ["O", "O", "B-ENT", "I-ENT", "I-ENT", "I-ENT", "I-ENT", "O", "O",
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"O", "O", "O", "O", "O"]
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2018-11-27 00:09:36 +00:00
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# fmt: on
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2017-01-12 14:30:49 +00:00
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tokens = en_tokenizer(text)
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2021-06-15 11:24:54 +00:00
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lemmas = [t.text for t in tokens] # this is not correct, just a placeholder
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spaces = [bool(t.whitespace_) for t in tokens]
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return Doc(
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tokens.vocab,
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words=[t.text for t in tokens],
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spaces=spaces,
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heads=heads,
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deps=deps,
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ents=ents,
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lemmas=lemmas,
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)
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2015-04-07 02:52:25 +00:00
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2018-03-27 17:23:02 +00:00
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@pytest.fixture
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def doc_not_parsed(en_tokenizer):
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text = "This is a sentence. This is another sentence. And a third."
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tokens = en_tokenizer(text)
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2018-07-24 21:38:44 +00:00
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doc = Doc(tokens.vocab, words=[t.text for t in tokens])
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return doc
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2018-03-27 17:23:02 +00:00
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2021-12-04 19:34:48 +00:00
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@pytest.mark.issue(1537)
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def test_issue1537():
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"""Test that Span.as_doc() doesn't segfault."""
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string = "The sky is blue . The man is pink . The dog is purple ."
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doc = Doc(Vocab(), words=string.split())
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doc[0].sent_start = True
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for word in doc[1:]:
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if word.nbor(-1).text == ".":
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word.sent_start = True
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else:
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word.sent_start = False
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sents = list(doc.sents)
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sent0 = sents[0].as_doc()
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sent1 = sents[1].as_doc()
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assert isinstance(sent0, Doc)
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assert isinstance(sent1, Doc)
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@pytest.mark.issue(1612)
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def test_issue1612(en_tokenizer):
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"""Test that span.orth_ is identical to span.text"""
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doc = en_tokenizer("The black cat purrs.")
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span = doc[1:3]
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assert span.orth_ == span.text
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@pytest.mark.issue(3199)
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def test_issue3199():
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"""Test that Span.noun_chunks works correctly if no noun chunks iterator
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is available. To make this test future-proof, we're constructing a Doc
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with a new Vocab here and a parse tree to make sure the noun chunks run.
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"""
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words = ["This", "is", "a", "sentence"]
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doc = Doc(Vocab(), words=words, heads=[0] * len(words), deps=["dep"] * len(words))
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with pytest.raises(NotImplementedError):
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list(doc[0:3].noun_chunks)
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@pytest.mark.issue(5152)
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def test_issue5152():
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# Test that the comparison between a Span and a Token, goes well
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# There was a bug when the number of tokens in the span equaled the number of characters in the token (!)
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nlp = English()
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text = nlp("Talk about being boring!")
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text_var = nlp("Talk of being boring!")
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y = nlp("Let")
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span = text[0:3] # Talk about being
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span_2 = text[0:3] # Talk about being
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span_3 = text_var[0:3] # Talk of being
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token = y[0] # Let
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with pytest.warns(UserWarning):
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assert span.similarity(token) == 0.0
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assert span.similarity(span_2) == 1.0
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with pytest.warns(UserWarning):
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assert span_2.similarity(span_3) < 1.0
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@pytest.mark.issue(6755)
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def test_issue6755(en_tokenizer):
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doc = en_tokenizer("This is a magnificent sentence.")
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span = doc[:0]
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assert span.text_with_ws == ""
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assert span.text == ""
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@pytest.mark.parametrize(
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"sentence, start_idx,end_idx,label",
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[("Welcome to Mumbai, my friend", 11, 17, "GPE")],
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)
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@pytest.mark.issue(6815)
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def test_issue6815_1(sentence, start_idx, end_idx, label):
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nlp = English()
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doc = nlp(sentence)
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span = doc[:].char_span(start_idx, end_idx, label=label)
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assert span.label_ == label
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@pytest.mark.parametrize(
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"sentence, start_idx,end_idx,kb_id", [("Welcome to Mumbai, my friend", 11, 17, 5)]
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)
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@pytest.mark.issue(6815)
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def test_issue6815_2(sentence, start_idx, end_idx, kb_id):
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nlp = English()
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doc = nlp(sentence)
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span = doc[:].char_span(start_idx, end_idx, kb_id=kb_id)
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assert span.kb_id == kb_id
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@pytest.mark.parametrize(
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"sentence, start_idx,end_idx,vector",
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[("Welcome to Mumbai, my friend", 11, 17, numpy.array([0.1, 0.2, 0.3]))],
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)
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@pytest.mark.issue(6815)
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def test_issue6815_3(sentence, start_idx, end_idx, vector):
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nlp = English()
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doc = nlp(sentence)
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span = doc[:].char_span(start_idx, end_idx, vector=vector)
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assert (span.vector == vector).all()
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2019-12-13 14:54:58 +00:00
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@pytest.mark.parametrize(
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"i_sent,i,j,text",
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[
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(0, 0, len("This is a"), "This is a"),
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(1, 0, len("This is another"), "This is another"),
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(2, len("And "), len("And ") + len("a third"), "a third"),
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(0, 1, 2, None),
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],
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)
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def test_char_span(doc, i_sent, i, j, text):
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sents = list(doc.sents)
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span = sents[i_sent].char_span(i, j)
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if not text:
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assert not span
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else:
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assert span.text == text
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2023-01-27 14:09:17 +00:00
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def test_char_span_attributes(doc):
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label = "LABEL"
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kb_id = "KB_ID"
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span_id = "SPAN_ID"
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span1 = doc.char_span(20, 45, label=label, kb_id=kb_id, span_id=span_id)
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span2 = doc[1:].char_span(15, 40, label=label, kb_id=kb_id, span_id=span_id)
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assert span1.text == span2.text
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assert span1.label_ == span2.label_ == label
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assert span1.kb_id_ == span2.kb_id_ == kb_id
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assert span1.id_ == span2.id_ == span_id
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2017-01-12 14:30:49 +00:00
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def test_spans_sent_spans(doc):
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2015-04-07 02:52:25 +00:00
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sents = list(doc.sents)
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assert sents[0].start == 0
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assert sents[0].end == 5
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assert len(sents) == 3
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assert sum(len(sent) for sent in sents) == len(doc)
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2015-07-09 15:30:58 +00:00
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2017-01-12 14:30:49 +00:00
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def test_spans_root(doc):
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span = doc[2:4]
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assert len(span) == 2
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2018-11-27 00:09:36 +00:00
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assert span.text == "a sentence"
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assert span.root.text == "sentence"
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assert span.root.head.text == "is"
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2016-01-16 15:19:09 +00:00
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2018-03-27 17:23:02 +00:00
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2017-03-11 00:50:02 +00:00
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def test_spans_string_fn(doc):
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span = doc[0:4]
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assert len(span) == 4
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assert span.text == "This is a sentence"
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2016-01-16 15:19:09 +00:00
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2018-03-27 17:23:02 +00:00
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2017-01-12 14:30:49 +00:00
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def test_spans_root2(en_tokenizer):
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text = "through North and South Carolina"
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2020-09-21 18:43:54 +00:00
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heads = [0, 4, 1, 1, 0]
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2020-09-16 22:14:01 +00:00
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deps = ["dep"] * len(heads)
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tokens = en_tokenizer(text)
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doc = Doc(tokens.vocab, words=[t.text for t in tokens], heads=heads, deps=deps)
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assert doc[-2:].root.text == "Carolina"
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2016-05-05 22:17:38 +00:00
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2018-03-27 17:23:02 +00:00
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def test_spans_span_sent(doc, doc_not_parsed):
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"""Test span.sent property"""
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2016-05-05 22:17:38 +00:00
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assert len(list(doc.sents))
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assert doc[:2].sent.root.text == "is"
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assert doc[:2].sent.text == "This is a sentence."
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2018-11-27 00:09:36 +00:00
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assert doc[6:7].sent.root.left_edge.text == "This"
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assert doc[0 : len(doc)].sent == list(doc.sents)[0]
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assert list(doc[0 : len(doc)].sents) == list(doc.sents)
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with pytest.raises(ValueError):
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doc_not_parsed[:2].sent
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2018-03-27 17:23:02 +00:00
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# test on manual sbd
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doc_not_parsed[0].is_sent_start = True
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doc_not_parsed[5].is_sent_start = True
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assert doc_not_parsed[1:3].sent == doc_not_parsed[0:5]
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assert doc_not_parsed[10:14].sent == doc_not_parsed[5:]
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2017-01-12 14:30:49 +00:00
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2021-12-06 08:58:01 +00:00
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@pytest.mark.parametrize(
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"start,end,expected_sentence",
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[
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(0, 14, "This is"), # Entire doc
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(1, 4, "This is"), # Overlapping with 2 sentences
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(0, 2, "This is"), # Beginning of the Doc. Full sentence
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(0, 1, "This is"), # Beginning of the Doc. Part of a sentence
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(10, 14, "And a"), # End of the Doc. Overlapping with 2 senteces
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(12, 14, "third."), # End of the Doc. Full sentence
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(1, 1, "This is"), # Empty Span
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],
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)
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def test_spans_span_sent_user_hooks(doc, start, end, expected_sentence):
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# Doc-level sents hook
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def user_hook(doc):
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return [doc[ii : ii + 2] for ii in range(0, len(doc), 2)]
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doc.user_hooks["sents"] = user_hook
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# Make sure doc-level sents hook works
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assert doc[start:end].sent.text == expected_sentence
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# Span-level sent hook
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doc.user_span_hooks["sent"] = lambda x: x
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# Now, span=level sent hook overrides the doc-level sents hook
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assert doc[start:end].sent == doc[start:end]
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2017-10-20 18:28:00 +00:00
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def test_spans_lca_matrix(en_tokenizer):
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"""Test span's lca matrix generation"""
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2018-11-27 00:09:36 +00:00
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tokens = en_tokenizer("the lazy dog slept")
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2020-09-21 18:43:54 +00:00
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doc = Doc(
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2020-09-21 08:59:07 +00:00
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tokens.vocab,
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words=[t.text for t in tokens],
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2020-09-21 18:43:54 +00:00
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heads=[2, 2, 3, 3],
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2020-09-21 08:59:07 +00:00
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deps=["dep"] * 4,
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)
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2017-10-20 18:28:00 +00:00
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lca = doc[:2].get_lca_matrix()
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2019-01-06 18:07:50 +00:00
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assert lca.shape == (2, 2)
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assert lca[0, 0] == 0 # the & the -> the
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2019-02-07 19:54:07 +00:00
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assert lca[0, 1] == -1 # the & lazy -> dog (out of span)
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assert lca[1, 0] == -1 # lazy & the -> dog (out of span)
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2019-01-06 18:07:50 +00:00
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assert lca[1, 1] == 1 # lazy & lazy -> lazy
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lca = doc[1:].get_lca_matrix()
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assert lca.shape == (3, 3)
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2019-02-07 19:54:07 +00:00
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assert lca[0, 0] == 0 # lazy & lazy -> lazy
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assert lca[0, 1] == 1 # lazy & dog -> dog
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assert lca[0, 2] == 2 # lazy & slept -> slept
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2019-01-06 18:07:50 +00:00
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lca = doc[2:].get_lca_matrix()
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assert lca.shape == (2, 2)
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2019-02-07 19:54:07 +00:00
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assert lca[0, 0] == 0 # dog & dog -> dog
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assert lca[0, 1] == 1 # dog & slept -> slept
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assert lca[1, 0] == 1 # slept & dog -> slept
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assert lca[1, 1] == 1 # slept & slept -> slept
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2017-10-20 18:28:00 +00:00
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2021-05-17 14:54:23 +00:00
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# example from Span API docs
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tokens = en_tokenizer("I like New York in Autumn")
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doc = Doc(
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tokens.vocab,
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words=[t.text for t in tokens],
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heads=[1, 1, 3, 1, 3, 4],
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deps=["dep"] * len(tokens),
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)
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lca = doc[1:4].get_lca_matrix()
|
|
|
|
assert_array_equal(lca, numpy.asarray([[0, 0, 0], [0, 1, 2], [0, 2, 2]]))
|
|
|
|
|
2017-10-20 18:28:00 +00:00
|
|
|
|
2018-01-15 15:29:48 +00:00
|
|
|
def test_span_similarity_match():
|
2018-11-27 00:09:36 +00:00
|
|
|
doc = Doc(Vocab(), words=["a", "b", "a", "b"])
|
2018-01-15 15:29:48 +00:00
|
|
|
span1 = doc[:2]
|
|
|
|
span2 = doc[2:]
|
2020-04-28 11:37:37 +00:00
|
|
|
with pytest.warns(UserWarning):
|
2018-05-20 23:22:38 +00:00
|
|
|
assert span1.similarity(span2) == 1.0
|
|
|
|
assert span1.similarity(doc) == 0.0
|
2018-11-27 00:09:36 +00:00
|
|
|
assert span1[:1].similarity(doc.vocab["a"]) == 1.0
|
2018-01-15 15:29:48 +00:00
|
|
|
|
|
|
|
|
2017-01-12 14:30:49 +00:00
|
|
|
def test_spans_default_sentiment(en_tokenizer):
|
|
|
|
"""Test span.sentiment property's default averaging behaviour"""
|
|
|
|
text = "good stuff bad stuff"
|
|
|
|
tokens = en_tokenizer(text)
|
|
|
|
tokens.vocab[tokens[0].text].sentiment = 3.0
|
|
|
|
tokens.vocab[tokens[2].text].sentiment = -2.0
|
2018-07-24 21:38:44 +00:00
|
|
|
doc = Doc(tokens.vocab, words=[t.text for t in tokens])
|
2017-01-12 14:30:49 +00:00
|
|
|
assert doc[:2].sentiment == 3.0 / 2
|
2018-11-27 00:09:36 +00:00
|
|
|
assert doc[-2:].sentiment == -2.0 / 2
|
|
|
|
assert doc[:-1].sentiment == (3.0 + -2) / 3.0
|
2017-01-12 14:30:49 +00:00
|
|
|
|
|
|
|
|
|
|
|
def test_spans_override_sentiment(en_tokenizer):
|
|
|
|
"""Test span.sentiment property's default averaging behaviour"""
|
|
|
|
text = "good stuff bad stuff"
|
|
|
|
tokens = en_tokenizer(text)
|
|
|
|
tokens.vocab[tokens[0].text].sentiment = 3.0
|
|
|
|
tokens.vocab[tokens[2].text].sentiment = -2.0
|
2018-07-24 21:38:44 +00:00
|
|
|
doc = Doc(tokens.vocab, words=[t.text for t in tokens])
|
2018-11-27 00:09:36 +00:00
|
|
|
doc.user_span_hooks["sentiment"] = lambda span: 10.0
|
2017-01-12 14:30:49 +00:00
|
|
|
assert doc[:2].sentiment == 10.0
|
|
|
|
assert doc[-2:].sentiment == 10.0
|
|
|
|
assert doc[:-1].sentiment == 10.0
|
2017-04-26 17:01:05 +00:00
|
|
|
|
|
|
|
|
|
|
|
def test_spans_are_hashable(en_tokenizer):
|
|
|
|
"""Test spans can be hashed."""
|
|
|
|
text = "good stuff bad stuff"
|
|
|
|
tokens = en_tokenizer(text)
|
|
|
|
span1 = tokens[:2]
|
|
|
|
span2 = tokens[2:4]
|
|
|
|
assert hash(span1) != hash(span2)
|
|
|
|
span3 = tokens[0:2]
|
|
|
|
assert hash(span3) == hash(span1)
|
2017-10-24 13:27:29 +00:00
|
|
|
|
2017-08-19 14:18:23 +00:00
|
|
|
|
|
|
|
def test_spans_by_character(doc):
|
|
|
|
span1 = doc[1:-2]
|
2020-08-04 11:36:32 +00:00
|
|
|
|
|
|
|
# default and specified alignment mode "strict"
|
2018-11-27 00:09:36 +00:00
|
|
|
span2 = doc.char_span(span1.start_char, span1.end_char, label="GPE")
|
2017-08-19 14:18:23 +00:00
|
|
|
assert span1.start_char == span2.start_char
|
|
|
|
assert span1.end_char == span2.end_char
|
2018-11-27 00:09:36 +00:00
|
|
|
assert span2.label_ == "GPE"
|
2017-08-19 14:24:38 +00:00
|
|
|
|
2020-10-01 12:01:52 +00:00
|
|
|
span2 = doc.char_span(
|
|
|
|
span1.start_char, span1.end_char, label="GPE", alignment_mode="strict"
|
|
|
|
)
|
2020-08-04 11:36:32 +00:00
|
|
|
assert span1.start_char == span2.start_char
|
|
|
|
assert span1.end_char == span2.end_char
|
|
|
|
assert span2.label_ == "GPE"
|
|
|
|
|
|
|
|
# alignment mode "contract"
|
2020-10-01 12:01:52 +00:00
|
|
|
span2 = doc.char_span(
|
|
|
|
span1.start_char - 3, span1.end_char, label="GPE", alignment_mode="contract"
|
|
|
|
)
|
2020-08-04 11:36:32 +00:00
|
|
|
assert span1.start_char == span2.start_char
|
|
|
|
assert span1.end_char == span2.end_char
|
|
|
|
assert span2.label_ == "GPE"
|
|
|
|
|
|
|
|
# alignment mode "expand"
|
2020-10-01 12:01:52 +00:00
|
|
|
span2 = doc.char_span(
|
|
|
|
span1.start_char + 1, span1.end_char, label="GPE", alignment_mode="expand"
|
|
|
|
)
|
2020-08-04 11:36:32 +00:00
|
|
|
assert span1.start_char == span2.start_char
|
|
|
|
assert span1.end_char == span2.end_char
|
|
|
|
assert span2.label_ == "GPE"
|
|
|
|
|
2021-01-27 12:40:42 +00:00
|
|
|
# unsupported alignment mode
|
|
|
|
with pytest.raises(ValueError):
|
|
|
|
span2 = doc.char_span(
|
|
|
|
span1.start_char + 1, span1.end_char, label="GPE", alignment_mode="unk"
|
|
|
|
)
|
|
|
|
|
2023-01-27 10:43:40 +00:00
|
|
|
# Span.char_span + alignment mode "contract"
|
|
|
|
span2 = doc[0:2].char_span(
|
|
|
|
span1.start_char - 3, span1.end_char, label="GPE", alignment_mode="contract"
|
|
|
|
)
|
|
|
|
assert span1.start_char == span2.start_char
|
|
|
|
assert span1.end_char == span2.end_char
|
|
|
|
assert span2.label_ == "GPE"
|
|
|
|
|
2017-08-19 14:24:38 +00:00
|
|
|
|
|
|
|
def test_span_to_array(doc):
|
|
|
|
span = doc[1:-2]
|
|
|
|
arr = span.to_array([ORTH, LENGTH])
|
|
|
|
assert arr.shape == (len(span), 2)
|
|
|
|
assert arr[0, 0] == span[0].orth
|
|
|
|
assert arr[0, 1] == len(span[0])
|
|
|
|
|
2017-10-24 13:28:05 +00:00
|
|
|
|
2018-07-24 21:38:44 +00:00
|
|
|
def test_span_as_doc(doc):
|
|
|
|
span = doc[4:10]
|
|
|
|
span_doc = span.as_doc()
|
|
|
|
assert span.text == span_doc.text.strip()
|
2018-12-30 14:17:46 +00:00
|
|
|
assert isinstance(span_doc, doc.__class__)
|
|
|
|
assert span_doc is not doc
|
|
|
|
assert span_doc[0].idx == 0
|
2018-08-07 11:52:32 +00:00
|
|
|
|
2021-05-11 15:10:16 +00:00
|
|
|
# partial initial entity is removed
|
|
|
|
assert len(span_doc.ents) == 0
|
|
|
|
|
|
|
|
# full entity is preserved
|
|
|
|
span_doc = doc[2:10].as_doc()
|
|
|
|
assert len(span_doc.ents) == 1
|
|
|
|
|
|
|
|
# partial final entity is removed
|
|
|
|
span_doc = doc[0:5].as_doc()
|
|
|
|
assert len(span_doc.ents) == 0
|
|
|
|
|
2018-11-27 00:09:36 +00:00
|
|
|
|
2021-03-30 07:49:12 +00:00
|
|
|
@pytest.mark.usefixtures("clean_underscore")
|
2019-09-12 15:08:14 +00:00
|
|
|
def test_span_as_doc_user_data(doc):
|
2021-06-15 11:24:54 +00:00
|
|
|
"""Test that the user_data can be preserved (but not by default)."""
|
2019-09-12 15:08:14 +00:00
|
|
|
my_key = "my_info"
|
|
|
|
my_value = 342
|
|
|
|
doc.user_data[my_key] = my_value
|
2021-03-30 07:49:12 +00:00
|
|
|
Token.set_extension("is_x", default=False)
|
|
|
|
doc[7]._.is_x = True
|
2019-09-12 15:08:14 +00:00
|
|
|
|
|
|
|
span = doc[4:10]
|
|
|
|
span_doc_with = span.as_doc(copy_user_data=True)
|
|
|
|
span_doc_without = span.as_doc()
|
|
|
|
|
|
|
|
assert doc.user_data.get(my_key, None) is my_value
|
|
|
|
assert span_doc_with.user_data.get(my_key, None) is my_value
|
|
|
|
assert span_doc_without.user_data.get(my_key, None) is None
|
2021-03-30 07:49:12 +00:00
|
|
|
for i in range(len(span_doc_with)):
|
|
|
|
if i != 3:
|
|
|
|
assert span_doc_with[i]._.is_x is False
|
|
|
|
else:
|
|
|
|
assert span_doc_with[i]._.is_x is True
|
|
|
|
assert not any([t._.is_x for t in span_doc_without])
|
2019-09-12 15:08:14 +00:00
|
|
|
|
|
|
|
|
2019-03-22 11:05:35 +00:00
|
|
|
def test_span_string_label_kb_id(doc):
|
|
|
|
span = Span(doc, 0, 1, label="hello", kb_id="Q342")
|
2019-02-07 19:54:07 +00:00
|
|
|
assert span.label_ == "hello"
|
|
|
|
assert span.label == doc.vocab.strings["hello"]
|
2019-03-22 11:05:35 +00:00
|
|
|
assert span.kb_id_ == "Q342"
|
|
|
|
assert span.kb_id == doc.vocab.strings["Q342"]
|
2019-02-07 19:54:07 +00:00
|
|
|
|
2018-12-08 12:08:41 +00:00
|
|
|
|
2022-06-02 11:12:53 +00:00
|
|
|
def test_span_string_label_id(doc):
|
|
|
|
span = Span(doc, 0, 1, label="hello", span_id="Q342")
|
|
|
|
assert span.label_ == "hello"
|
|
|
|
assert span.label == doc.vocab.strings["hello"]
|
|
|
|
assert span.id_ == "Q342"
|
|
|
|
assert span.id == doc.vocab.strings["Q342"]
|
|
|
|
|
|
|
|
|
2021-05-17 08:05:45 +00:00
|
|
|
def test_span_attrs_writable(doc):
|
2018-12-08 12:08:41 +00:00
|
|
|
span = Span(doc, 0, 1)
|
2021-05-17 08:05:45 +00:00
|
|
|
span.label_ = "label"
|
|
|
|
span.kb_id_ = "kb_id"
|
2022-06-02 11:12:53 +00:00
|
|
|
span.id_ = "id"
|
2019-03-22 11:05:35 +00:00
|
|
|
|
|
|
|
|
2018-08-07 11:52:32 +00:00
|
|
|
def test_span_ents_property(doc):
|
|
|
|
doc.ents = [
|
2018-11-27 00:09:36 +00:00
|
|
|
(doc.vocab.strings["PRODUCT"], 0, 1),
|
|
|
|
(doc.vocab.strings["PRODUCT"], 7, 8),
|
|
|
|
(doc.vocab.strings["PRODUCT"], 11, 14),
|
2018-08-07 11:52:32 +00:00
|
|
|
]
|
|
|
|
assert len(list(doc.ents)) == 3
|
|
|
|
sentences = list(doc.sents)
|
|
|
|
assert len(sentences) == 3
|
|
|
|
assert len(sentences[0].ents) == 1
|
|
|
|
# First sentence, also tests start of sentence
|
|
|
|
assert sentences[0].ents[0].text == "This"
|
|
|
|
assert sentences[0].ents[0].label_ == "PRODUCT"
|
|
|
|
assert sentences[0].ents[0].start == 0
|
|
|
|
assert sentences[0].ents[0].end == 1
|
|
|
|
# Second sentence
|
|
|
|
assert len(sentences[1].ents) == 1
|
|
|
|
assert sentences[1].ents[0].text == "another"
|
|
|
|
assert sentences[1].ents[0].label_ == "PRODUCT"
|
|
|
|
assert sentences[1].ents[0].start == 7
|
|
|
|
assert sentences[1].ents[0].end == 8
|
|
|
|
# Third sentence ents, Also tests end of sentence
|
2021-06-15 11:24:54 +00:00
|
|
|
assert sentences[2].ents[0].text == "a third."
|
2018-08-07 11:52:32 +00:00
|
|
|
assert sentences[2].ents[0].label_ == "PRODUCT"
|
|
|
|
assert sentences[2].ents[0].start == 11
|
|
|
|
assert sentences[2].ents[0].end == 14
|
2019-05-08 00:33:40 +00:00
|
|
|
|
|
|
|
|
|
|
|
def test_filter_spans(doc):
|
|
|
|
# Test filtering duplicates
|
|
|
|
spans = [doc[1:4], doc[6:8], doc[1:4], doc[10:14]]
|
|
|
|
filtered = filter_spans(spans)
|
|
|
|
assert len(filtered) == 3
|
|
|
|
assert filtered[0].start == 1 and filtered[0].end == 4
|
|
|
|
assert filtered[1].start == 6 and filtered[1].end == 8
|
|
|
|
assert filtered[2].start == 10 and filtered[2].end == 14
|
|
|
|
# Test filtering overlaps with longest preference
|
|
|
|
spans = [doc[1:4], doc[1:3], doc[5:10], doc[7:9], doc[1:4]]
|
|
|
|
filtered = filter_spans(spans)
|
|
|
|
assert len(filtered) == 2
|
|
|
|
assert len(filtered[0]) == 3
|
|
|
|
assert len(filtered[1]) == 5
|
|
|
|
assert filtered[0].start == 1 and filtered[0].end == 4
|
|
|
|
assert filtered[1].start == 5 and filtered[1].end == 10
|
2019-10-10 15:00:03 +00:00
|
|
|
# Test filtering overlaps with earlier preference for identical length
|
|
|
|
spans = [doc[1:4], doc[2:5], doc[5:10], doc[7:9], doc[1:4]]
|
|
|
|
filtered = filter_spans(spans)
|
|
|
|
assert len(filtered) == 2
|
|
|
|
assert len(filtered[0]) == 3
|
|
|
|
assert len(filtered[1]) == 5
|
|
|
|
assert filtered[0].start == 1 and filtered[0].end == 4
|
|
|
|
assert filtered[1].start == 5 and filtered[1].end == 10
|
2020-02-16 16:20:36 +00:00
|
|
|
|
|
|
|
|
|
|
|
def test_span_eq_hash(doc, doc_not_parsed):
|
|
|
|
assert doc[0:2] == doc[0:2]
|
|
|
|
assert doc[0:2] != doc[1:3]
|
|
|
|
assert doc[0:2] != doc_not_parsed[0:2]
|
|
|
|
assert hash(doc[0:2]) == hash(doc[0:2])
|
|
|
|
assert hash(doc[0:2]) != hash(doc[1:3])
|
|
|
|
assert hash(doc[0:2]) != hash(doc_not_parsed[0:2])
|
2020-08-04 11:35:25 +00:00
|
|
|
|
2021-08-02 17:07:19 +00:00
|
|
|
# check that an out-of-bounds is not equivalent to the span of the full doc
|
|
|
|
assert doc[0 : len(doc)] != doc[len(doc) : len(doc) + 1]
|
|
|
|
|
2020-08-04 11:35:25 +00:00
|
|
|
|
|
|
|
def test_span_boundaries(doc):
|
|
|
|
start = 1
|
|
|
|
end = 5
|
|
|
|
span = doc[start:end]
|
|
|
|
for i in range(start, end):
|
|
|
|
assert span[i - start] == doc[i]
|
|
|
|
with pytest.raises(IndexError):
|
2020-08-05 14:00:59 +00:00
|
|
|
span[-5]
|
2020-08-04 11:35:25 +00:00
|
|
|
with pytest.raises(IndexError):
|
2020-08-05 14:00:59 +00:00
|
|
|
span[5]
|
2020-10-01 12:01:52 +00:00
|
|
|
|
2021-08-02 17:07:19 +00:00
|
|
|
empty_span_0 = doc[0:0]
|
|
|
|
assert empty_span_0.text == ""
|
|
|
|
assert empty_span_0.start == 0
|
|
|
|
assert empty_span_0.end == 0
|
|
|
|
assert empty_span_0.start_char == 0
|
|
|
|
assert empty_span_0.end_char == 0
|
|
|
|
|
|
|
|
empty_span_1 = doc[1:1]
|
|
|
|
assert empty_span_1.text == ""
|
|
|
|
assert empty_span_1.start == 1
|
|
|
|
assert empty_span_1.end == 1
|
|
|
|
assert empty_span_1.start_char == empty_span_1.end_char
|
|
|
|
|
|
|
|
oob_span_start = doc[-len(doc) - 1 : -len(doc) - 10]
|
|
|
|
assert oob_span_start.text == ""
|
|
|
|
assert oob_span_start.start == 0
|
|
|
|
assert oob_span_start.end == 0
|
|
|
|
assert oob_span_start.start_char == 0
|
|
|
|
assert oob_span_start.end_char == 0
|
|
|
|
|
|
|
|
oob_span_end = doc[len(doc) + 1 : len(doc) + 10]
|
|
|
|
assert oob_span_end.text == ""
|
|
|
|
assert oob_span_end.start == len(doc)
|
|
|
|
assert oob_span_end.end == len(doc)
|
|
|
|
assert oob_span_end.start_char == len(doc.text)
|
|
|
|
assert oob_span_end.end_char == len(doc.text)
|
|
|
|
|
2020-10-01 12:01:52 +00:00
|
|
|
|
2021-06-15 11:24:54 +00:00
|
|
|
def test_span_lemma(doc):
|
|
|
|
# span lemmas should have the same number of spaces as the span
|
|
|
|
sp = doc[1:5]
|
|
|
|
assert len(sp.text.split(" ")) == len(sp.lemma_.split(" "))
|
|
|
|
|
|
|
|
|
2020-10-01 12:01:52 +00:00
|
|
|
def test_sent(en_tokenizer):
|
|
|
|
doc = en_tokenizer("Check span.sent raises error if doc is not sentencized.")
|
|
|
|
span = doc[1:3]
|
2020-10-04 12:52:20 +00:00
|
|
|
assert not span.doc.has_annotation("SENT_START")
|
2020-10-01 12:01:52 +00:00
|
|
|
with pytest.raises(ValueError):
|
|
|
|
span.sent
|
2021-09-20 18:22:49 +00:00
|
|
|
|
|
|
|
|
|
|
|
def test_span_with_vectors(doc):
|
|
|
|
ops = get_current_ops()
|
|
|
|
prev_vectors = doc.vocab.vectors
|
|
|
|
vectors = [
|
|
|
|
("apple", ops.asarray([1, 2, 3])),
|
|
|
|
("orange", ops.asarray([-1, -2, -3])),
|
|
|
|
("And", ops.asarray([-1, -1, -1])),
|
|
|
|
("juice", ops.asarray([5, 5, 10])),
|
|
|
|
("pie", ops.asarray([7, 6.3, 8.9])),
|
|
|
|
]
|
|
|
|
add_vecs_to_vocab(doc.vocab, vectors)
|
|
|
|
# 0-length span
|
2021-09-24 08:46:43 +00:00
|
|
|
assert_array_equal(ops.to_numpy(doc[0:0].vector), numpy.zeros((3,)))
|
2021-09-20 18:22:49 +00:00
|
|
|
# longer span with no vector
|
2021-09-24 08:46:43 +00:00
|
|
|
assert_array_equal(ops.to_numpy(doc[0:4].vector), numpy.zeros((3,)))
|
2021-09-20 18:22:49 +00:00
|
|
|
# single-token span with vector
|
|
|
|
assert_array_equal(ops.to_numpy(doc[10:11].vector), [-1, -1, -1])
|
|
|
|
doc.vocab.vectors = prev_vectors
|
2021-12-06 08:58:01 +00:00
|
|
|
|
|
|
|
|
2022-01-17 10:17:49 +00:00
|
|
|
# fmt: off
|
|
|
|
def test_span_comparison(doc):
|
|
|
|
|
|
|
|
# Identical start, end, only differ in label and kb_id
|
|
|
|
assert Span(doc, 0, 3) == Span(doc, 0, 3)
|
|
|
|
assert Span(doc, 0, 3, "LABEL") == Span(doc, 0, 3, "LABEL")
|
|
|
|
assert Span(doc, 0, 3, "LABEL", kb_id="KB_ID") == Span(doc, 0, 3, "LABEL", kb_id="KB_ID")
|
|
|
|
|
|
|
|
assert Span(doc, 0, 3) != Span(doc, 0, 3, "LABEL")
|
|
|
|
assert Span(doc, 0, 3) != Span(doc, 0, 3, "LABEL", kb_id="KB_ID")
|
|
|
|
assert Span(doc, 0, 3, "LABEL") != Span(doc, 0, 3, "LABEL", kb_id="KB_ID")
|
|
|
|
|
|
|
|
assert Span(doc, 0, 3) <= Span(doc, 0, 3) and Span(doc, 0, 3) >= Span(doc, 0, 3)
|
|
|
|
assert Span(doc, 0, 3, "LABEL") <= Span(doc, 0, 3, "LABEL") and Span(doc, 0, 3, "LABEL") >= Span(doc, 0, 3, "LABEL")
|
|
|
|
assert Span(doc, 0, 3, "LABEL", kb_id="KB_ID") <= Span(doc, 0, 3, "LABEL", kb_id="KB_ID")
|
|
|
|
assert Span(doc, 0, 3, "LABEL", kb_id="KB_ID") >= Span(doc, 0, 3, "LABEL", kb_id="KB_ID")
|
|
|
|
|
|
|
|
assert (Span(doc, 0, 3) < Span(doc, 0, 3, "", kb_id="KB_ID") < Span(doc, 0, 3, "LABEL") < Span(doc, 0, 3, "LABEL", kb_id="KB_ID"))
|
|
|
|
assert (Span(doc, 0, 3) <= Span(doc, 0, 3, "", kb_id="KB_ID") <= Span(doc, 0, 3, "LABEL") <= Span(doc, 0, 3, "LABEL", kb_id="KB_ID"))
|
|
|
|
|
|
|
|
assert (Span(doc, 0, 3, "LABEL", kb_id="KB_ID") > Span(doc, 0, 3, "LABEL") > Span(doc, 0, 3, "", kb_id="KB_ID") > Span(doc, 0, 3))
|
|
|
|
assert (Span(doc, 0, 3, "LABEL", kb_id="KB_ID") >= Span(doc, 0, 3, "LABEL") >= Span(doc, 0, 3, "", kb_id="KB_ID") >= Span(doc, 0, 3))
|
|
|
|
|
|
|
|
# Different end
|
|
|
|
assert Span(doc, 0, 3, "LABEL", kb_id="KB_ID") < Span(doc, 0, 4, "LABEL", kb_id="KB_ID")
|
|
|
|
|
|
|
|
assert Span(doc, 0, 3, "LABEL", kb_id="KB_ID") < Span(doc, 0, 4)
|
|
|
|
assert Span(doc, 0, 3, "LABEL", kb_id="KB_ID") <= Span(doc, 0, 4)
|
|
|
|
assert Span(doc, 0, 4) > Span(doc, 0, 3, "LABEL", kb_id="KB_ID")
|
|
|
|
assert Span(doc, 0, 4) >= Span(doc, 0, 3, "LABEL", kb_id="KB_ID")
|
|
|
|
|
|
|
|
# Different start
|
|
|
|
assert Span(doc, 0, 3, "LABEL", kb_id="KB_ID") != Span(doc, 1, 3, "LABEL", kb_id="KB_ID")
|
|
|
|
|
|
|
|
assert Span(doc, 0, 3, "LABEL", kb_id="KB_ID") < Span(doc, 1, 3)
|
|
|
|
assert Span(doc, 0, 3, "LABEL", kb_id="KB_ID") <= Span(doc, 1, 3)
|
|
|
|
assert Span(doc, 1, 3) > Span(doc, 0, 3, "LABEL", kb_id="KB_ID")
|
|
|
|
assert Span(doc, 1, 3) >= Span(doc, 0, 3, "LABEL", kb_id="KB_ID")
|
|
|
|
|
|
|
|
# Different start & different end
|
|
|
|
assert Span(doc, 0, 4, "LABEL", kb_id="KB_ID") != Span(doc, 1, 3, "LABEL", kb_id="KB_ID")
|
|
|
|
|
|
|
|
assert Span(doc, 0, 4, "LABEL", kb_id="KB_ID") < Span(doc, 1, 3)
|
|
|
|
assert Span(doc, 0, 4, "LABEL", kb_id="KB_ID") <= Span(doc, 1, 3)
|
|
|
|
assert Span(doc, 1, 3) > Span(doc, 0, 4, "LABEL", kb_id="KB_ID")
|
|
|
|
assert Span(doc, 1, 3) >= Span(doc, 0, 4, "LABEL", kb_id="KB_ID")
|
2022-06-02 11:12:53 +00:00
|
|
|
|
|
|
|
# Different id
|
|
|
|
assert Span(doc, 1, 3, span_id="AAA") < Span(doc, 1, 3, span_id="BBB")
|
2022-01-17 10:17:49 +00:00
|
|
|
# fmt: on
|
|
|
|
|
|
|
|
|
2021-12-06 08:58:01 +00:00
|
|
|
@pytest.mark.parametrize(
|
|
|
|
"start,end,expected_sentences,expected_sentences_with_hook",
|
|
|
|
[
|
|
|
|
(0, 14, 3, 7), # Entire doc
|
|
|
|
(3, 6, 2, 2), # Overlapping with 2 sentences
|
|
|
|
(0, 4, 1, 2), # Beginning of the Doc. Full sentence
|
|
|
|
(0, 3, 1, 2), # Beginning of the Doc. Part of a sentence
|
|
|
|
(9, 14, 2, 3), # End of the Doc. Overlapping with 2 senteces
|
|
|
|
(10, 14, 1, 2), # End of the Doc. Full sentence
|
|
|
|
(11, 14, 1, 2), # End of the Doc. Partial sentence
|
|
|
|
(0, 0, 1, 1), # Empty Span
|
|
|
|
],
|
|
|
|
)
|
|
|
|
def test_span_sents(doc, start, end, expected_sentences, expected_sentences_with_hook):
|
|
|
|
|
|
|
|
assert len(list(doc[start:end].sents)) == expected_sentences
|
|
|
|
|
|
|
|
def user_hook(doc):
|
|
|
|
return [doc[ii : ii + 2] for ii in range(0, len(doc), 2)]
|
|
|
|
|
|
|
|
doc.user_hooks["sents"] = user_hook
|
|
|
|
|
|
|
|
assert len(list(doc[start:end].sents)) == expected_sentences_with_hook
|
|
|
|
|
|
|
|
doc.user_span_hooks["sents"] = lambda x: [x]
|
|
|
|
|
|
|
|
assert list(doc[start:end].sents)[0] == doc[start:end]
|
|
|
|
assert len(list(doc[start:end].sents)) == 1
|
|
|
|
|
|
|
|
|
|
|
|
def test_span_sents_not_parsed(doc_not_parsed):
|
|
|
|
with pytest.raises(ValueError):
|
|
|
|
list(Span(doc_not_parsed, 0, 3).sents)
|
2022-02-21 09:24:15 +00:00
|
|
|
|
|
|
|
|
|
|
|
def test_span_group_copy(doc):
|
|
|
|
doc.spans["test"] = [doc[0:1], doc[2:4]]
|
|
|
|
assert len(doc.spans["test"]) == 2
|
|
|
|
doc_copy = doc.copy()
|
|
|
|
# check that the spans were indeed copied
|
|
|
|
assert len(doc_copy.spans["test"]) == 2
|
|
|
|
# add a new span to the original doc
|
|
|
|
doc.spans["test"].append(doc[3:4])
|
|
|
|
assert len(doc.spans["test"]) == 3
|
|
|
|
# check that the copy spans were not modified and this is an isolated doc
|
|
|
|
assert len(doc_copy.spans["test"]) == 2
|
2023-03-14 09:21:53 +00:00
|
|
|
|
|
|
|
|
|
|
|
def test_for_partial_ent_sents():
|
|
|
|
"""Spans may be associated with multiple sentences. These .sents should always be complete, not partial, sentences,
|
|
|
|
which this tests for.
|
|
|
|
"""
|
|
|
|
doc = Doc(
|
|
|
|
English().vocab,
|
|
|
|
words=["Mahler's", "Symphony", "No.", "8", "was", "beautiful."],
|
|
|
|
sent_starts=[1, 0, 0, 1, 0, 0],
|
|
|
|
)
|
|
|
|
doc.set_ents([Span(doc, 1, 4, "WORK")])
|
|
|
|
# The specified entity is associated with both sentences in this doc, so we expect all sentences in the doc to be
|
|
|
|
# equal to the sentences referenced in ent.sents.
|
|
|
|
for doc_sent, ent_sent in zip(doc.sents, doc.ents[0].sents):
|
|
|
|
assert doc_sent == ent_sent
|
2023-03-29 16:54:47 +00:00
|
|
|
|
|
|
|
|
|
|
|
def test_for_no_ent_sents():
|
|
|
|
"""Span.sents() should set .sents correctly, even if Span in question is trailing and doesn't form a full
|
|
|
|
sentence.
|
|
|
|
"""
|
|
|
|
doc = Doc(
|
|
|
|
English().vocab,
|
|
|
|
words=["This", "is", "a", "test.", "ENTITY"],
|
|
|
|
sent_starts=[1, 0, 0, 0, 1],
|
|
|
|
)
|
|
|
|
doc.set_ents([Span(doc, 4, 5, "WORK")])
|
|
|
|
sents = list(doc.ents[0].sents)
|
|
|
|
assert len(sents) == 1
|
|
|
|
assert str(sents[0]) == str(doc.ents[0].sent) == "ENTITY"
|