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126 Commits

Author SHA1 Message Date
Akshay Philar 67ff01079d
MNT Update python dependencies (#753) 
Co-authored-by: Roman Yurchak <rth.yurchak@gmail.com>
 2020-10-17 17:03:02 +02:00
Roman Yurchak 67eab0c082
MNT update pure python packages (#745) 2020-10-17 09:07:19 +02:00
smkm 67d9afb066
PKG Update freesasa version to 2.1.0 (#755) 2020-09-26 16:20:23 +02:00
smkm e7dde959b8
PKG Update freesasa version to 2.1.0b1 (#747) 2020-08-25 09:03:29 +02:00
Roman Yurchak 5cc20673be
MNT Add mypy setup in CI and pre-commit (#746) 2020-08-16 19:35:32 +02:00
Alexey Ignatiev 2fc35ea3d2
Bumped python-sat to 0.1.6.dev6. (#741) 2020-08-13 08:49:48 +02:00
Michael Greminger 1c54b0b904
TST Add sympy test (#732) 2020-08-03 15:04:15 +02:00
Joseph D. Long 166b4aff87
Build Astropy 3.2.3 for Pyodide (#410) 2020-07-15 21:45:41 +02:00
Sergio f03cf8b667
ENH Automate package updates (#569) 
Co-authored-by: Sergio <sergio.martins@points.com>
Co-authored-by: Roman Yurchak <rth.yurchak@gmail.com>
 2020-07-13 23:34:10 +02:00
chigozienri 0dfb78e374
ENH: Add traits package (#724) 2020-07-12 20:48:52 +02:00
Roman Yurchak bcc4f6b521
MNT Clean-up root folder (#714) 
* Move six

* Move jedi and parso

* Move lz4

* Move CLAPACK

* Move zlib and libxslt

* Move libiconv and libxml

* Remobe netlify/state.json and move remove_modules to cpython

* Move bumpversion.cfg to setup.cfg

* Reset cache

* Fix test_common.py
 2020-07-08 16:58:10 +02:00
Alexey Ignatiev b7f6904127
Fix Updated sha256 in python-sat (#715) 2020-07-08 10:25:19 +02:00
Roman Yurchak fc5495ffdb
Update to Python 3.8.2 (#712) 
* Updating to CPython 3.8

* More fixes

* Skip python headers check in tools/dependency-check.sh

* Fix checksum

* Fix packages

* Fix syntax error

* Fix benchmark path

* Update CPython tests

* More test fixes

* Fix PyStone

* More Cpython test fixes

* Update docs

* Fix issue in conftest

* Add documentation

* Upload updated Docker image
 2020-07-07 16:21:33 +02:00
Alexey Ignatiev 3032dcc5ea
PKG Added the python-sat package (#710) 2020-07-07 12:28:33 +02:00
Jay Harris d1a5cfeb25
Compile python lxml (#544) 
Co-authored-by: Luiz Silva <luizfrdasilva@gmail.com>
 2020-06-30 18:37:22 +02:00
Roman Yurchak 9afc7a1617
STY Apply black for code style (#702) 
* Apply black

* A few fixes

* Relax flake8 checks

* Exclude tools/file_packager.py from black
 2020-06-28 20:24:40 +02:00
Roman Yurchak 0e26ca0642
BLD Build CLAPACK, cpython and lz4 in parallel (#701) 2020-06-28 15:51:46 +02:00
Roman Yurchak 3e4cc07b6d
Update to numpy 1.15.4 and pandas 1.0.5 (#697) 2020-06-27 17:14:39 +02:00
Roman Yurchak e7dd4588ab
MNT Add pre-commit config (#698) 2020-06-27 14:57:48 +02:00
Seungmin Kim 69f65d3e4e
Add package freesasa and add biopython missing requirement (#696) 2020-06-27 12:28:41 +02:00
Roman Yurchak 00ef8956f8
MAINT Remove pytest.ini (#664) 2020-05-18 21:22:48 +02:00
Jan Max Meyer 93f184c6e5
Merge pull request #652 from rth/arbitrary-wheel-location 
Support installing from URLs in micropip
 2020-05-12 14:54:05 +02:00
Jan Max Meyer e8d2d82c1b
Merge pull request #645 from rth/partial-build 
Support partial builds
 2020-05-12 14:53:17 +02:00
Roman Yurchak 354f79aefd Fix typo in test 2020-05-12 14:11:22 +02:00
Roman Yurchak 21cd9fd366 Minor fix in tests 2020-05-12 12:19:15 +02:00
Roman Yurchak 4be718c852 Add snowballstemmer example file 2020-05-11 10:08:20 +02:00
Roman Yurchak ac68a30511 Supporty custom wheel locations in micropip 2020-05-11 09:51:14 +02:00
Roman Yurchak faee135865
Remove CORS proxy in micropip (#650) 2020-05-10 15:47:09 +02:00
Roman Yurchak 5ba82b81f9 Add mechanism to build a subset of packages 2020-05-09 01:28:44 +02:00
jcaesar 3f9da19e9a
allow micropip to function in a web worker (#632) 2020-04-15 10:28:59 -04:00
JP 2196c3d17c
add autograd and future packages (#609) 2020-02-03 12:50:53 +01:00
benabel 86b1e1e3ee Add package uncertainties (#571) 2019-11-25 13:00:46 -05:00
Sergio 9398f4083b Update versions of various python packages (#570) 2019-11-25 12:58:42 -05:00
Sergio abbcd2c428 Add xlrd python package (#566) 2019-11-21 12:25:12 -05:00
Teon L Brooks 55857ffcac Update MNE package (#460) 2019-10-27 09:21:01 +01:00
Jay Harris 0f452c4e44 Adds cytoolz (#539) 
* Adds cytoolz

* Adds trailing newline

* Adds support for toolz and cytoolz

* Adds toolz (dependency of cytoolz)

* Updates import test
 2019-10-22 12:07:34 -04:00
William Lachance 0ab5e8a67c More minor patches to python to accomodate Mac 2019-10-21 12:27:18 -04:00
Jay Harris 77e3326559 Adds regex package (#538) 2019-10-16 09:26:41 -04:00
Filip Š 72a410c5ff Fix unknown marker variable (#528) 
* Fix unknown marker variable

fix-unknown-marker-variable

* Add tests for fix

* Add comments
 2019-10-11 08:56:33 -04:00
Inés Añibarro 74b4461bda Feature/add statsmodels (#515) 
* adding meta.yaml for statsmodels

* adding meta.yaml for statsmodels

* adding requirements in meta

* downgrading statsmodels to 0.9.0
 2019-10-10 08:25:24 -04:00
Marc Abramowitz 620446455d Add NLTK: Natural Language Toolkit (#360) 2019-08-15 10:27:16 +03:00
Jan Max Meyer e1af6fe57c ENH Make local package sources (path) available for meta.yaml (#324) 2019-07-08 20:37:22 +02:00
Roman Yurchak 2cf8639973 MAINT Move package tests under packages/ dir (#471) 
* Move package tests under the packages/ folder

* Fix tests
 2019-06-19 14:26:08 -04:00
Roman Yurchak 6898c871f3
Add mmap module (#468) 2019-06-18 17:55:28 -07:00
Joost van Zwieten 020b7f7783 fix micropip.install packages with dependencies (#454) 
The variable `req` in method `_PackageManager.add_requirement` is erroneously
reused for iterating over recursive requirements, if any.  This causes the
remaining statement to fail.  This patch renames the variable used for the
recursive requirements to `recurs_req`.

Fixes: #413
 2019-06-04 10:00:55 -04:00
Michael Droettboom c3c2f10bc5
Loading wheels from PyPI (#147) 
* Add micropip

* Remove CORS proxy for metadata

* Update docs

* Support loading a mixture of built-in and PyPI packages
 2019-05-03 13:43:31 -04:00
Michael Droettboom c8db5b6433
Fix #401: Better error message when using "import js" (#404) 
* Fix #401: Use PEP 562 to make "import js" work

* Add docs

* Fix handling of missing attributes

* Add CHANGELOG

* Fix iodide import
 2019-05-01 14:56:30 -04:00
hexagon6 17dec0920e feature(package): add biopython (#391) 2019-04-24 11:08:47 -04:00
Marc Abramowitz 875df76b2f Add Jinja2 and MarkupSafe (#359) 
```javascript
_ = languagePluginLoader.then(() => {
  // pyodide is now ready to use...
  pyodide.loadPackage('Jinja2').then(() => {
    pyodide.runPython(`
import jinja2

template = jinja2.Template('Hello {{ name }}!')
print(template.render(name='Zach'))
    `);
  });
});
```
 2019-04-04 13:56:56 -04:00
Teon L Brooks befdfe781d [MRG] Include mne (#372) 
* Include mne

* Update meta.yaml
 2019-04-03 11:58:33 -04:00