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647 Commits

Author SHA1 Message Date
Bart Broere 9aaa9060d2
Add simplejson (#3801) 2023-05-01 11:39:19 -07:00
Loïc Estève 24957acc13
Update scipy to 1.10.1 (#3794) 2023-04-25 07:06:25 -07:00
Bart Broere fabd87cbba
Fix bokeh package (add xyzservices, include pandas as runtime dependency) (#3786) 
Co-authored-by: Hood Chatham <roberthoodchatham@gmail.com>
 2023-04-25 10:19:03 +09:00
Bart Broere 2f27188ae9
Numpy patch release 1.24.3 (#3790) 2023-04-24 10:25:24 +09:00
Gyeongjae Choi 17844abdf7
Re-enable sparseqr (#3783) 2023-04-21 09:25:55 +09:00
Deepak Cherian 412e082431
Update xarray to 2023.04.1 (#3779) 2023-04-19 15:57:39 +09:00
Deepak Cherian 9c28f51526
Update to xarray 2023.04.0 (#3773) 2023-04-15 09:16:54 +09:00
Loïc Estève 7193109f4d
Package OpenBLAS and use OpenBLAS in scipy (#3331) 2023-04-11 21:30:07 -07:00
Loïc Estève 5db237d482
Update libmpfr version and use ftp.gnu.org (#3756) 2023-04-11 14:45:12 +00:00
Gyeongjae Choi f1cc7c622e
Remove CMAKE_INSTALL_PREFIX (#3754) 
Resolves #3753
 2023-04-11 07:24:33 +02:00
Hood Chatham b22731f34d
Switch to mpfr mirror (#3749) 
Build is failing because the ssl certificate for mpfr.loria.fr expired. This switches to a mirror.
 2023-04-08 17:11:52 -07:00
Luiz Irber 24f839a2f2
New package: sourmash (and deps) (#3635) 
Add sourmash (Python + Rust extension, packaged with maturin) and missing pure-wheel deps (screed, bitstring, cachetools, deprecation).

After a couple of fixes in sourmash-bio/sourmash#2433 I managed to build it out-of-tree, would like to have it available here to make it easier to distribute (while PyPI doesn't support emscripten wheels).
 2023-04-07 20:11:30 -07:00
Hanno Rein 8464064b41
Update rebound and reboundx (#3725) 2023-04-01 17:37:30 -07:00
Roman Yurchak c7168bf112
Remove pyparsing dependency in packaging (#3726) 
We forgot to remove it when updating packaging.
 2023-04-01 20:26:11 +09:00
chrysn 2b20b2b0d0
Add package cbor-diag (#3715) 2023-03-30 20:54:28 +02:00
Gyeongjae Choi 2046310460
ENH Support SDL-based packages and add pyxel (#3508) 
Co-authored-by: Hood Chatham <roberthoodchatham@gmail.com>
Co-authored-by: Roman Yurchak <rth.yurchak@gmail.com>
 2023-03-30 08:18:31 +00:00
Roman Yurchak 0714afd3b6
More package updates + micropip 0.3.0 (#3709) 2023-03-29 16:28:42 +02:00
Hood Chatham 0579db7e2e
Update all packages (#3685) 
Co-authored-by: Roman Yurchak <rth.yurchak@gmail.com>
 2023-03-29 10:39:43 +02:00
Roman Yurchak 8058cb6703
Support for py-compiling folders + repodata.json update (#3700) 
Co-authored-by: Gyeongjae Choi <def6488@gmail.com>
 2023-03-28 11:28:28 +00:00
Roman Yurchak dc2dd417cb
PKG Add yarl and idna (#3703) 
This adds the yarl package which is a requirement (with some Cython code) for the openai client library (#3588). 
idna is a Pure python dependency of yarl.
 2023-03-28 16:37:36 +09:00
Roman Yurchak de7ac903e7
DOC Remove pyodide-build CLI from the documentation (#3699) 
[skip ci]
 2023-03-27 09:58:13 +02:00
Gyeongjae Choi dddfa820f9
Remove deprecated methods (#3677) 
Remove deprecated methods before releasing 0.23 following the [deprecation timeline](https://github.com/pyodide/pyodide/blob/main/docs/project/deprecation-timeline.md)
 2023-03-27 10:48:33 +09:00
Hood Chatham edddf21c7b
MAINT Improvements to mkpkg error handling (#3684) 
Removes tracebacks from "user errors" and improves error messages.
 2023-03-27 09:55:51 +09:00
Gyeongjae Choi f5f1bb5ca3
Specify rust toolchain requirements in cramjam meta.yaml (#3691) 2023-03-24 13:14:47 +09:00
Deepak Cherian fc999cd145
Update xarray to 2023.03.0 (#3683) 
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 2023-03-23 09:00:24 +01:00
Hood Chatham 92afb1342c
Add multidict (#3581) 2023-03-22 17:42:43 +01:00
Roman Yurchak 601d939fdd
Fix wheel compression with the JsDelivr CDN (#3667) 
Set the MIME type for wheels and zip files to application/wasm to enable CDN compression. Also optionally disable compression in zip files and wheels to make the brotli compression by the CDN more efficient.

Co-authored-by: Gyeongjae Choi <def6488@gmail.com>
 2023-03-21 09:11:47 +01:00
Roman Yurchak 59b2c4e1ef
Remove deprecated pyodide-build buildall and mkpkg CLI endpoints (#3668) 2023-03-20 08:43:04 +01:00
Gyeongjae Choi 802a9cd26b
Handle response files in pywasmcross (#3645) 
Co-authored-by: josephrocca <1167575+josephrocca@users.noreply.github.com>
 2023-03-17 09:00:51 +09:00
Loïc Estève 4028757968
Fix arpack *eupd issues due to numpy 1.24 f2py changes (#3658) 2023-03-17 08:59:16 +09:00
Roman Yurchak 7d6be15cb8
Fix scikit-image optional dependencies (#3656) 2023-03-15 15:26:55 +01:00
Loïc Estève d78597957a
MNT Update scikit-learn to 1.2.2 (#3654) 2023-03-14 19:56:23 +01:00
Christian Clauss 57f36ac6f8
Ruff is now compatible with Python pattern matching (#3650) 2023-03-13 22:45:06 +01:00
Gyeongjae Choi 66c73ce1c8
Increase driver timeout of tests that timeouts often (#3633) 
Increase the timeout of xarray and fastparquet tests
 2023-03-07 13:11:34 +01:00
martinRenou 172ad32f5f
Update NumPy to 1.24.2 (#3593) 
And remove patches which were introduced in numpy/numpy#21732 numpy/numpy#21733 and numpy/numpy#21894
 2023-03-06 17:42:15 +01:00
Arpit 42fa9939b0
Upgrades packaging version to v23.0 and micropip to 0.2.2 (#3605) 
Co-authored-by: Roman Yurchak <rth.yurchak@gmail.com>
 2023-03-04 21:45:23 +01:00
Jo Bovy fc9ca86ad1
Update galpy to v1.8.2 (#3630) 2023-03-04 21:11:25 +09:00
Joe Marshall 0fdf9a80fa
Add Fastparquet (#3590) 2023-03-02 14:46:58 +09:00
Gyeongjae Choi ed3ae1ba49
Download standard libraries in a zipfile (#3582) 2023-03-01 23:11:30 +01:00
Gyeongjae Choi 205deef3cc
Minor opencv-python meta.yaml fix (#3604) 2023-02-23 19:27:28 +09:00
Gyeongjae Choi 994ce5111f
BLD Add DISTDIR variable (#3584) 2023-02-17 08:25:42 +09:00
Gyeongjae Choi d4bb0df3fa
Remove some build-only dependencies from meta.yaml (#3576) 2023-02-13 09:56:08 -08:00
Deepak Cherian 21d941bd34
Update to Xarray 2023.02.0 (#3554) 2023-02-08 08:47:06 +09:00
Roman Yurchak 48258ff146
Replace isort, flake8, pycln and pyupgrade by ruff (#3522) 
Co-authored-by: Henry Schreiner <HenrySchreinerIII@gmail.com>
 2023-02-07 08:35:20 +09:00
Gyeongjae Choi dcdc1e6941
Unvendor pydoc_data and _pydecimal (#3525) 
Removes / unvendors some python modules:

- Remove `_aix_support.py`, which is for supporting IBM AIX OS.

- Unvendor `_pydecimal.py`.
  - _pydecimal is a pure Python implementation of `decimal` module. [Importing `decimal` fallbacks](https://github.com/python/cpython/blob/main/Lib/decimal.py) to `_pydecimal` if the C-implementation `_decimal` is not available. In our case, _decimal is available, so _pydecimal will not be normally used. 

- Unvendor `pydoc_data`.
  - pydoc_data contains [a large (~700KB) dictionary](https://github.com/python/cpython/blob/main/Lib/pydoc_data/topics.py) for explaining python builtins. This is mostly used when `help("...")` is called.
 2023-02-01 11:00:17 +09:00
Gyeongjae Choi f50c749c9a
Apply upstream cpython commits to relocate test directories (#3507) 2023-01-30 13:34:33 +09:00
Hood Chatham eb2ffeb660
Add compiled mypy (#3504) 2023-01-27 20:05:49 -08:00
Hood Chatham cca5e9f87f
Add pynacl (#3500) 
Resolves https://github.com/pyodide/pyodide/issues/3327
 2023-01-27 16:36:46 -08:00
Gyeongjae Choi 328a9ffc34
Add tag key in meta.yaml spec (#3444) 
Co-authored-by: Roman Yurchak <rth.yurchak@gmail.com>
Co-authored-by: Hood Chatham <roberthoodchatham@gmail.com>
 2023-01-27 13:31:26 +09:00
Hood Chatham 3b2952fc92
Python3.11 (#3252) 2023-01-23 19:45:59 -08:00