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150 Commits

Author SHA1 Message Date
casatir 0bc63387f4
PKG Fix Python 3.8 warnings in mpmath (#894) 2020-12-19 19:54:17 +01:00
casatir 4e976df897
yt update (#890) 2020-12-19 00:28:51 +01:00
Nicolas Ollinger e79c1ab238
PKG add scikit-image package (#866) 
Co-authored-by: Chigozie Nri <chigozie@gmail.com>
 2020-12-16 21:46:27 +01:00
Nicolas Ollinger 3a06f5dfcb
add pillow package (#861) 2020-12-15 10:18:39 +01:00
Dexter Chua 1a0a474f94
Tidy up CLAPACK patches (#862) 2020-12-14 18:04:02 +01:00
Roman Yurchak 3dbb4ebff3
Merge CLAPACK patches together (#856) 2020-12-14 12:05:18 +01:00
Dexter Chua a012a6677b
Add pyodide-interrupt package (#852) 2020-12-14 09:16:13 +01:00
Dexter Chua c7c445e83c
Undo part of CLAPACK patch 0003 (#860) 2020-12-14 09:14:03 +01:00
Dexter Chua 34026265fc
Remove lz4_c patch (#851) 2020-12-13 12:41:22 +01:00
casatir 349567c02e
FIX micropip not getting last version from PyPi (#846) 
Co-authored-by: Romain Casati <romain.casati@webati.fr>
 2020-12-12 11:47:01 +01:00
Dexter Chua 03447f9fff
Use newer docker image in run_docker (#848) 2020-12-12 11:31:53 +01:00
Roman Yurchak db9f12826f
Split build for core and packages in CI pipeline (#828) 2020-12-11 16:47:47 +01:00
Dexter Chua 861746a675
Build packages in parallel (#840) 2020-12-10 20:37:08 +01:00
Dexter Chua 0defcb3825
BLD Don't compile host python (#830) 2020-12-08 00:19:16 +01:00
Roman Yurchak 411a058d7b
TST Replace test CGI server with pytest-httpserver (#823) 2020-12-06 14:08:22 +01:00
Dexter Chua 3a2719369e
PKG Downgrade parso to 0.7.1 (#822) 
This is what jedi 0.17.2 wants
 2020-12-05 13:09:46 +01:00
Dexter Chua a780abcae1
PKG Update jedi and parso to 0.17.2 and 0.8.0 resp (#807) 2020-12-03 19:33:13 +01:00
Dexter Chua d67648a6b8
BLD Update package build script's default ldflags (#817) 2020-12-03 14:27:40 +01:00
Dexter Chua 2c97465418
Update SIZEOF_OFF_T to 8 in numpy/config.h (#816) 
It was changed from 4 to 8 in emscripten 1.38.31. Before the patch,
compiling numpy gives some warnings about redefining SIZEOF_OFF_T, but
as far as I can tell, it did not cause any real issues.
 2020-12-02 14:32:52 +01:00
Roman Yurchak 41b9ad1a7b
Remove threading patches and don't remove multiprocessing module (#796) 2020-11-22 11:25:36 +01:00
Roman Yurchak 8c22c98a43
MAINT Reorganize src/ and tests/ folders (#786) 2020-11-09 13:28:02 +01:00
Matthew Turk 7d3a6da40c
Add yt package (#789) 2020-11-07 10:54:30 +01:00
Roman Yurchak 231ddd7feb
PKG/MNT Update scikit-learn to v0.22 (#783) 2020-11-01 11:41:04 +01:00
Roman Yurchak f1cc304717
DOC Refactor API reference documentation (#782) 2020-10-31 21:00:58 +01:00
Akshay Philar 67ff01079d
MNT Update python dependencies (#753) 
Co-authored-by: Roman Yurchak <rth.yurchak@gmail.com>
 2020-10-17 17:03:02 +02:00
Roman Yurchak 67eab0c082
MNT update pure python packages (#745) 2020-10-17 09:07:19 +02:00
smkm 67d9afb066
PKG Update freesasa version to 2.1.0 (#755) 2020-09-26 16:20:23 +02:00
smkm e7dde959b8
PKG Update freesasa version to 2.1.0b1 (#747) 2020-08-25 09:03:29 +02:00
Roman Yurchak 5cc20673be
MNT Add mypy setup in CI and pre-commit (#746) 2020-08-16 19:35:32 +02:00
Alexey Ignatiev 2fc35ea3d2
Bumped python-sat to 0.1.6.dev6. (#741) 2020-08-13 08:49:48 +02:00
Michael Greminger 1c54b0b904
TST Add sympy test (#732) 2020-08-03 15:04:15 +02:00
Joseph D. Long 166b4aff87
Build Astropy 3.2.3 for Pyodide (#410) 2020-07-15 21:45:41 +02:00
Sergio f03cf8b667
ENH Automate package updates (#569) 
Co-authored-by: Sergio <sergio.martins@points.com>
Co-authored-by: Roman Yurchak <rth.yurchak@gmail.com>
 2020-07-13 23:34:10 +02:00
chigozienri 0dfb78e374
ENH: Add traits package (#724) 2020-07-12 20:48:52 +02:00
Roman Yurchak bcc4f6b521
MNT Clean-up root folder (#714) 
* Move six

* Move jedi and parso

* Move lz4

* Move CLAPACK

* Move zlib and libxslt

* Move libiconv and libxml

* Remobe netlify/state.json and move remove_modules to cpython

* Move bumpversion.cfg to setup.cfg

* Reset cache

* Fix test_common.py
 2020-07-08 16:58:10 +02:00
Alexey Ignatiev b7f6904127
Fix Updated sha256 in python-sat (#715) 2020-07-08 10:25:19 +02:00
Roman Yurchak fc5495ffdb
Update to Python 3.8.2 (#712) 
* Updating to CPython 3.8

* More fixes

* Skip python headers check in tools/dependency-check.sh

* Fix checksum

* Fix packages

* Fix syntax error

* Fix benchmark path

* Update CPython tests

* More test fixes

* Fix PyStone

* More Cpython test fixes

* Update docs

* Fix issue in conftest

* Add documentation

* Upload updated Docker image
 2020-07-07 16:21:33 +02:00
Alexey Ignatiev 3032dcc5ea
PKG Added the python-sat package (#710) 2020-07-07 12:28:33 +02:00
Jay Harris d1a5cfeb25
Compile python lxml (#544) 
Co-authored-by: Luiz Silva <luizfrdasilva@gmail.com>
 2020-06-30 18:37:22 +02:00
Roman Yurchak 9afc7a1617
STY Apply black for code style (#702) 
* Apply black

* A few fixes

* Relax flake8 checks

* Exclude tools/file_packager.py from black
 2020-06-28 20:24:40 +02:00
Roman Yurchak 0e26ca0642
BLD Build CLAPACK, cpython and lz4 in parallel (#701) 2020-06-28 15:51:46 +02:00
Roman Yurchak 3e4cc07b6d
Update to numpy 1.15.4 and pandas 1.0.5 (#697) 2020-06-27 17:14:39 +02:00
Roman Yurchak e7dd4588ab
MNT Add pre-commit config (#698) 2020-06-27 14:57:48 +02:00
Seungmin Kim 69f65d3e4e
Add package freesasa and add biopython missing requirement (#696) 2020-06-27 12:28:41 +02:00
Roman Yurchak 00ef8956f8
MAINT Remove pytest.ini (#664) 2020-05-18 21:22:48 +02:00
Jan Max Meyer 93f184c6e5
Merge pull request #652 from rth/arbitrary-wheel-location 
Support installing from URLs in micropip
 2020-05-12 14:54:05 +02:00
Jan Max Meyer e8d2d82c1b
Merge pull request #645 from rth/partial-build 
Support partial builds
 2020-05-12 14:53:17 +02:00
Roman Yurchak 354f79aefd Fix typo in test 2020-05-12 14:11:22 +02:00
Roman Yurchak 21cd9fd366 Minor fix in tests 2020-05-12 12:19:15 +02:00
Roman Yurchak 4be718c852 Add snowballstemmer example file 2020-05-11 10:08:20 +02:00