lightning/tests/trainer/test_trainer.py

1202 lines
43 KiB
Python

import glob
import math
import os
import pickle
import sys
import types
from argparse import Namespace
from copy import deepcopy
from pathlib import Path
from unittest.mock import patch, call, ANY
import cloudpickle
import pytest
import torch
from omegaconf import OmegaConf
import tests.base.develop_utils as tutils
from pytorch_lightning import Callback, LightningModule, Trainer
from pytorch_lightning.callbacks import EarlyStopping, ModelCheckpoint
from pytorch_lightning.core.saving import (
load_hparams_from_tags_csv, load_hparams_from_yaml, save_hparams_to_tags_csv)
from pytorch_lightning.loggers import TensorBoardLogger
from pytorch_lightning.trainer.logging import TrainerLoggingMixin
from pytorch_lightning.utilities.cloud_io import load as pl_load
from pytorch_lightning.utilities.exceptions import MisconfigurationException
from pytorch_lightning.utilities import NATIVE_AMP_AVALAIBLE
from tests.base import EvalModelTemplate
@pytest.mark.parametrize('url_ckpt', [True, False])
def test_no_val_module(monkeypatch, tmpdir, tmpdir_server, url_ckpt):
"""Tests use case where trainer saves the model, and user loads it from tags independently."""
# set $TORCH_HOME, which determines torch hub's cache path, to tmpdir
monkeypatch.setenv('TORCH_HOME', str(tmpdir))
model = EvalModelTemplate()
# logger file to get meta
logger = tutils.get_default_logger(tmpdir)
trainer = Trainer(
default_root_dir=tmpdir,
max_epochs=1,
logger=logger,
checkpoint_callback=ModelCheckpoint(tmpdir),
)
# fit model
result = trainer.fit(model)
# training complete
assert result == 1, 'amp + ddp model failed to complete'
# save model
new_weights_path = os.path.join(tmpdir, 'save_test.ckpt')
trainer.save_checkpoint(new_weights_path)
# assert ckpt has hparams
ckpt = torch.load(new_weights_path)
assert LightningModule.CHECKPOINT_HYPER_PARAMS_KEY in ckpt.keys(), 'module_arguments missing from checkpoints'
# load new model
hparams_path = tutils.get_data_path(logger, path_dir=tmpdir)
hparams_path = os.path.join(hparams_path, 'hparams.yaml')
ckpt_path = f'http://{tmpdir_server[0]}:{tmpdir_server[1]}/{os.path.basename(new_weights_path)}' if url_ckpt else new_weights_path
model_2 = EvalModelTemplate.load_from_checkpoint(
checkpoint_path=ckpt_path,
hparams_file=hparams_path,
)
model_2.eval()
@pytest.mark.parametrize('url_ckpt', [True, False])
def test_no_val_end_module(monkeypatch, tmpdir, tmpdir_server, url_ckpt):
"""Tests use case where trainer saves the model, and user loads it from tags independently."""
# set $TORCH_HOME, which determines torch hub's cache path, to tmpdir
monkeypatch.setenv('TORCH_HOME', tmpdir)
model = EvalModelTemplate()
# logger file to get meta
logger = tutils.get_default_logger(tmpdir)
# fit model
trainer = Trainer(
default_root_dir=tmpdir,
max_epochs=1,
logger=logger,
checkpoint_callback=ModelCheckpoint(tmpdir),
)
result = trainer.fit(model)
# traning complete
assert result == 1, 'amp + ddp model failed to complete'
# save model
new_weights_path = os.path.join(tmpdir, 'save_test.ckpt')
trainer.save_checkpoint(new_weights_path)
# load new model
hparams_path = tutils.get_data_path(logger, path_dir=tmpdir)
hparams_path = os.path.join(hparams_path, 'hparams.yaml')
ckpt_path = f'http://{tmpdir_server[0]}:{tmpdir_server[1]}/{os.path.basename(new_weights_path)}' if url_ckpt else new_weights_path
model_2 = EvalModelTemplate.load_from_checkpoint(
checkpoint_path=ckpt_path,
hparams_file=hparams_path,
)
model_2.eval()
@pytest.mark.parametrize('url_ckpt', [True, False])
def test_strict_model_load(monkeypatch, tmpdir, tmpdir_server, url_ckpt):
"""Tests use case where trainer saves the model, and user loads it from tags independently."""
# set $TORCH_HOME, which determines torch hub's cache path, to tmpdir
monkeypatch.setenv('TORCH_HOME', tmpdir)
model = EvalModelTemplate()
# Extra layer
model.c_d3 = torch.nn.Linear(model.hidden_dim, model.hidden_dim)
# logger file to get meta
logger = tutils.get_default_logger(tmpdir)
# fit model
trainer = Trainer(
default_root_dir=tmpdir,
max_epochs=1,
logger=logger,
checkpoint_callback=ModelCheckpoint(tmpdir),
)
result = trainer.fit(model)
# traning complete
assert result == 1
# save model
new_weights_path = os.path.join(tmpdir, 'save_test.ckpt')
trainer.save_checkpoint(new_weights_path)
# load new model
hparams_path = tutils.get_data_path(logger, path_dir=tmpdir)
hparams_path = os.path.join(hparams_path, 'hparams.yaml')
ckpt_path = f'http://{tmpdir_server[0]}:{tmpdir_server[1]}/{os.path.basename(new_weights_path)}' \
if url_ckpt else new_weights_path
try:
EvalModelTemplate.load_from_checkpoint(
checkpoint_path=ckpt_path,
hparams_file=hparams_path,
)
except Exception:
failed = True
else:
failed = False
assert failed, "Model should not been loaded since the extra layer added."
failed = False
try:
EvalModelTemplate.load_from_checkpoint(
checkpoint_path=ckpt_path,
hparams_file=hparams_path,
strict=False,
)
except Exception:
failed = True
assert not failed, "Model should be loaded due to strict=False."
@pytest.mark.parametrize(
['schedule', 'expected'],
[
pytest.param({1: 2, 3: 4}, [1, 2, 4]),
pytest.param(3, [3, 3, 3]),
pytest.param(4, [4, 4, 4])
]
)
def test_gradient_accumulation_scheduling(tmpdir, schedule, expected):
"""
Test grad accumulation by the freq of optimizer updates
"""
# test incorrect configs
with pytest.raises(IndexError):
assert Trainer(accumulate_grad_batches={-1: 3, 1: 4, 4: 6})
with pytest.raises(IndexError):
assert Trainer(accumulate_grad_batches={-2: 3})
with pytest.raises(TypeError):
assert Trainer(accumulate_grad_batches={})
with pytest.raises(TypeError):
assert Trainer(accumulate_grad_batches=[[2, 3], [4, 6]])
with pytest.raises(TypeError):
assert Trainer(accumulate_grad_batches={1: 2, 3.: 4})
with pytest.raises(TypeError):
assert Trainer(accumulate_grad_batches={1: 2.5, 3: 5})
model = EvalModelTemplate()
trainer = Trainer(
accumulate_grad_batches=schedule,
limit_train_batches=0.7, # not to be divisible by accumulate_grad_batches on purpose
limit_val_batches=0.8,
max_epochs=4,
default_root_dir=tmpdir,
)
# test optimizer call freq matches scheduler
def _optimizer_step(epoch, batch_idx, optimizer, optimizer_idx,
second_order_closure=None, on_tpu=False,
using_native_amp=False, using_lbfgs=False):
# only test the first 12 batches in epoch
if batch_idx < 12:
if epoch == 0:
# reset counter when starting epoch
if batch_idx == expected[0] - 1:
model.prev_called_batch_idx = expected[0] - 1
# use this opportunity to test once
assert trainer.accumulate_grad_batches == expected[0]
# separate check for last batch with accumulate 1 step
if expected[0] == 1 and (batch_idx + 1) == trainer.num_training_batches:
assert batch_idx == model.prev_called_batch_idx
elif (batch_idx + 1) == trainer.num_training_batches:
# prev_called_batch_idx - schedule + modulus remainder
assert batch_idx == (model.prev_called_batch_idx - expected[0] + (batch_idx + 1) % expected[0])
else:
assert batch_idx == model.prev_called_batch_idx
model.prev_called_batch_idx += expected[0]
elif 1 <= epoch <= 2:
# reset counter when starting epoch
if batch_idx == expected[1] - 1:
model.prev_called_batch_idx = expected[1] - 1
# use this opportunity to test once
assert trainer.accumulate_grad_batches == expected[1]
if trainer.num_training_batches == batch_idx + 1:
# prev_called_batch_idx - schedule + modulus remainder
assert batch_idx == (model.prev_called_batch_idx - expected[1] + (batch_idx + 1) % expected[1])
else:
assert batch_idx == model.prev_called_batch_idx
model.prev_called_batch_idx += expected[1]
else:
if batch_idx == expected[2] - 1:
model.prev_called_batch_idx = expected[2] - 1
# use this opportunity to test once
assert trainer.accumulate_grad_batches == expected[2]
if (batch_idx + 1) == trainer.num_training_batches:
# prev_called_batch_idx - schedule + modulus remainder
assert batch_idx == (model.prev_called_batch_idx - expected[2] + (batch_idx + 1) % expected[2])
else:
assert batch_idx == model.prev_called_batch_idx
model.prev_called_batch_idx += expected[2]
optimizer.step()
# clear gradients
optimizer.zero_grad()
# for the test
model.optimizer_step = _optimizer_step
model.prev_called_batch_idx = 0
trainer.fit(model)
@pytest.mark.parametrize(
['accumulate_grad_batches', 'limit_train_batches'],
[
pytest.param({1: 2, 3: 4}, 1.0),
pytest.param({1: 2, 3: 4}, 0.5), # not to be divisible by accumulate_grad_batches on purpose
pytest.param(3, 1.0),
pytest.param(3, 0.8), # not to be divisible by accumulate_grad_batches on purpose
pytest.param(4, 1.0),
pytest.param(4, 0.7), # not to be divisible by accumulate_grad_batches on purpose
],
)
def test_gradient_accumulation_scheduling_last_batch(tmpdir, accumulate_grad_batches, limit_train_batches):
""" Verify optimizer.step() applied to last batch while grad accumulation """
class CurrentModel(EvalModelTemplate):
def on_after_backward(self):
self.loss_backward = deepcopy(self.state_dict())
def on_before_zero_grad(self, optimizer):
self.opt_step = self.state_dict()
def on_train_batch_end(self, outputs, batch, batch_idx, dataloader_idx):
_exclude_keys = ['num_batches_tracked', 'running_mean', 'running_var']
if (batch_idx + 1) == self.trainer.num_training_batches:
for key in self.loss_backward.keys():
# exclude the check for batch_norm parameters
if not any([k in key for k in _exclude_keys]):
assert not torch.equal(self.loss_backward[key], self.opt_step[key])
model = CurrentModel()
trainer = Trainer(
accumulate_grad_batches=accumulate_grad_batches,
max_epochs=4,
limit_train_batches=limit_train_batches,
default_root_dir=tmpdir
)
trainer.fit(model)
def test_loading_meta_tags(tmpdir):
""" test for backward compatibility to meta_tags.csv """
tutils.reset_seed()
hparams = EvalModelTemplate.get_default_hparams()
# save tags
logger = tutils.get_default_logger(tmpdir)
logger.log_hyperparams(Namespace(some_str='a_str', an_int=1, a_float=2.0))
logger.log_hyperparams(hparams)
logger.save()
# load hparams
path_expt_dir = tutils.get_data_path(logger, path_dir=tmpdir)
hparams_path = os.path.join(path_expt_dir, TensorBoardLogger.NAME_HPARAMS_FILE)
hparams = load_hparams_from_yaml(hparams_path)
# save as legacy meta_tags.csv
tags_path = os.path.join(path_expt_dir, 'meta_tags.csv')
save_hparams_to_tags_csv(tags_path, hparams)
tags = load_hparams_from_tags_csv(tags_path)
assert hparams == tags
def test_loading_yaml(tmpdir):
tutils.reset_seed()
hparams = EvalModelTemplate.get_default_hparams()
# save tags
logger = tutils.get_default_logger(tmpdir)
logger.log_hyperparams(Namespace(some_str='a_str', an_int=1, a_float=2.0))
logger.log_hyperparams(hparams)
logger.save()
# load hparams
path_expt_dir = tutils.get_data_path(logger, path_dir=tmpdir)
hparams_path = os.path.join(path_expt_dir, 'hparams.yaml')
tags = load_hparams_from_yaml(hparams_path)
assert tags['batch_size'] == 32 and tags['hidden_dim'] == 1000
def test_dp_output_reduce():
mixin = TrainerLoggingMixin()
# test identity when we have a single gpu
out = torch.rand(3, 1)
assert mixin.reduce_distributed_output(out, num_gpus=1) is out
# average when we have multiples
assert mixin.reduce_distributed_output(out, num_gpus=2) == out.mean()
# when we have a dict of vals
out = {
'a': out,
'b': {
'c': out
}
}
reduced = mixin.reduce_distributed_output(out, num_gpus=3)
assert reduced['a'] == out['a']
assert reduced['b']['c'] == out['b']['c']
@pytest.mark.parametrize(["save_top_k", "save_last", "file_prefix", "expected_files"], [
pytest.param(-1, False, '', {'epoch=4.ckpt', 'epoch=3.ckpt', 'epoch=2.ckpt', 'epoch=1.ckpt', 'epoch=0.ckpt'},
id="CASE K=-1 (all)"),
pytest.param(1, False, 'test_prefix', {'test_prefix-epoch=4.ckpt'},
id="CASE K=1 (2.5, epoch 4)"),
pytest.param(2, False, '', {'epoch=4.ckpt', 'epoch=2.ckpt'},
id="CASE K=2 (2.5 epoch 4, 2.8 epoch 2)"),
pytest.param(4, False, '', {'epoch=1.ckpt', 'epoch=4.ckpt', 'epoch=3.ckpt', 'epoch=2.ckpt'},
id="CASE K=4 (save all 4 base)"),
pytest.param(3, False, '', {'epoch=2.ckpt', 'epoch=3.ckpt', 'epoch=4.ckpt'},
id="CASE K=3 (save the 2nd, 3rd, 4th model)"),
pytest.param(1, True, '', {'epoch=4.ckpt', 'last.ckpt'},
id="CASE K=1 (save the 4th model and the last model)"),
])
def test_model_checkpoint_options(tmpdir, save_top_k, save_last, file_prefix, expected_files):
"""Test ModelCheckpoint options."""
def mock_save_function(filepath, *args):
open(filepath, 'a').close()
# simulated losses
losses = [10, 9, 2.8, 5, 2.5]
checkpoint_callback = ModelCheckpoint(tmpdir, monitor='checkpoint_on', save_top_k=save_top_k, save_last=save_last,
prefix=file_prefix, verbose=1)
checkpoint_callback.save_function = mock_save_function
trainer = Trainer()
# emulate callback's calls during the training
for i, loss in enumerate(losses):
trainer.current_epoch = i
trainer.global_step = i
trainer.logger_connector.callback_metrics = {'checkpoint_on': torch.tensor(loss)}
checkpoint_callback.on_validation_end(trainer, trainer.get_model())
file_lists = set(os.listdir(tmpdir))
assert len(file_lists) == len(expected_files), (
f"Should save {len(expected_files)} models when save_top_k={save_top_k} but found={file_lists}"
)
# verify correct naming
for fname in expected_files:
assert fname in file_lists
def test_model_checkpoint_only_weights(tmpdir):
"""Tests use case where ModelCheckpoint is configured to save only model weights, and
user tries to load checkpoint to resume training.
"""
model = EvalModelTemplate()
trainer = Trainer(
default_root_dir=tmpdir,
max_epochs=1,
checkpoint_callback=ModelCheckpoint(tmpdir, monitor='early_stop_on', save_weights_only=True),
)
# fit model
result = trainer.fit(model)
# training complete
assert result == 1, 'training failed to complete'
checkpoint_path = list(trainer.checkpoint_callback.best_k_models.keys())[0]
# assert saved checkpoint has no trainer data
checkpoint = torch.load(checkpoint_path)
assert 'optimizer_states' not in checkpoint, 'checkpoint should contain only model weights'
assert 'lr_schedulers' not in checkpoint, 'checkpoint should contain only model weights'
# assert loading model works when checkpoint has only weights
assert EvalModelTemplate.load_from_checkpoint(checkpoint_path=checkpoint_path)
# directly save model
new_weights_path = os.path.join(tmpdir, 'save_test.ckpt')
trainer.save_checkpoint(new_weights_path, weights_only=True)
# assert saved checkpoint has no trainer data
checkpoint = torch.load(new_weights_path)
assert 'optimizer_states' not in checkpoint, 'checkpoint should contain only model weights'
assert 'lr_schedulers' not in checkpoint, 'checkpoint should contain only model weights'
# assert restoring train state fails
with pytest.raises(KeyError, match='checkpoint contains only the model'):
trainer.checkpoint_connector.restore_training_state(checkpoint)
def test_model_freeze_unfreeze():
model = EvalModelTemplate()
model.freeze()
model.unfreeze()
@pytest.mark.parametrize('url_ckpt', [True, False])
def test_resume_from_checkpoint_epoch_restored(monkeypatch, tmpdir, tmpdir_server, url_ckpt):
"""Verify resuming from checkpoint runs the right number of epochs"""
# set $TORCH_HOME, which determines torch hub's cache path, to tmpdir
monkeypatch.setenv('TORCH_HOME', tmpdir)
hparams = EvalModelTemplate.get_default_hparams()
def _new_model():
# Create a model that tracks epochs and batches seen
model = EvalModelTemplate(**hparams)
model.num_epochs_seen = 0
model.num_batches_seen = 0
model.num_on_load_checkpoint_called = 0
def increment_epoch(self):
self.num_epochs_seen += 1
def increment_batch(self, batch, batch_idx, dataloader_idx):
self.num_batches_seen += 1
def increment_on_load_checkpoint(self, _):
self.num_on_load_checkpoint_called += 1
# Bind methods to keep track of epoch numbers, batch numbers it has seen
# as well as number of times it has called on_load_checkpoint()
model.on_epoch_end = types.MethodType(increment_epoch, model)
model.on_train_batch_start = types.MethodType(increment_batch, model)
model.on_load_checkpoint = types.MethodType(increment_on_load_checkpoint, model)
return model
model = _new_model()
trainer_options = dict(
progress_bar_refresh_rate=0,
max_epochs=2,
limit_train_batches=0.65,
limit_val_batches=1,
checkpoint_callback=ModelCheckpoint(tmpdir, monitor='early_stop_on', save_top_k=-1),
default_root_dir=tmpdir,
early_stop_callback=False,
val_check_interval=1.,
)
trainer = Trainer(**trainer_options)
# fit model
trainer.fit(model)
training_batches = trainer.num_training_batches
assert model.num_epochs_seen == 2
assert model.num_batches_seen == training_batches * 2
assert model.num_on_load_checkpoint_called == 0
# Other checkpoints can be uncommented if/when resuming mid-epoch is supported
checkpoints = sorted(glob.glob(os.path.join(trainer.checkpoint_callback.dirpath, '*.ckpt')))
if url_ckpt:
# transform local paths into url checkpoints
ip, port = tmpdir_server
checkpoints = [f'http://{ip}:{port}/' + os.path.basename(check) for check in checkpoints]
for check in checkpoints:
next_model = _new_model()
state = pl_load(check)
# Resume training
trainer_options['max_epochs'] = 2
new_trainer = Trainer(**trainer_options, resume_from_checkpoint=check)
new_trainer.fit(next_model)
assert state['global_step'] + next_model.num_batches_seen == training_batches * trainer_options['max_epochs']
assert next_model.num_on_load_checkpoint_called == 1
def _init_steps_model():
"""private method for initializing a model with 5% train epochs"""
model = EvalModelTemplate()
# define train epoch to 5% of data
train_percent = 0.5
# get number of samples in 1 epoch
num_train_samples = math.floor(len(model.train_dataloader()) * train_percent)
trainer_options = dict(
limit_train_batches=train_percent,
)
return model, trainer_options, num_train_samples
def test_trainer_max_steps_and_epochs(tmpdir):
"""Verify model trains according to specified max steps"""
model, trainer_options, num_train_samples = _init_steps_model()
# define less train steps than epochs
trainer_options.update(
default_root_dir=tmpdir,
max_epochs=3,
max_steps=num_train_samples + 10,
)
# fit model
trainer = Trainer(**trainer_options)
result = trainer.fit(model)
assert result == 1, "Training did not complete"
# check training stopped at max_steps
assert trainer.global_step == trainer.max_steps, "Model did not stop at max_steps"
# define less train epochs than steps
trainer_options.update(
max_epochs=2,
max_steps=trainer_options['max_epochs'] * 2 * num_train_samples,
)
# fit model
trainer = Trainer(**trainer_options)
result = trainer.fit(model)
assert result == 1, "Training did not complete"
# check training stopped at max_epochs
assert trainer.global_step == num_train_samples * trainer.max_epochs
assert trainer.current_epoch == trainer.max_epochs - 1, "Model did not stop at max_epochs"
def test_trainer_min_steps_and_epochs(tmpdir):
"""Verify model trains according to specified min steps"""
model, trainer_options, num_train_samples = _init_steps_model()
# define callback for stopping the model and default epochs
trainer_options.update(
default_root_dir=tmpdir,
early_stop_callback=EarlyStopping(monitor='early_stop_on', min_delta=1.0),
val_check_interval=2,
min_epochs=1,
max_epochs=7,
)
# define less min steps than 1 epoch
trainer_options['min_steps'] = math.floor(num_train_samples / 2)
# fit model
trainer = Trainer(**trainer_options)
result = trainer.fit(model)
assert result == 1, "Training did not complete"
# check model ran for at least min_epochs
assert trainer.global_step >= num_train_samples and \
trainer.current_epoch > 0, "Model did not train for at least min_epochs"
# define less epochs than min_steps
trainer_options['min_steps'] = math.floor(num_train_samples * 1.5)
# fit model
trainer = Trainer(**trainer_options)
result = trainer.fit(model)
assert result == 1, "Training did not complete"
# check model ran for at least num_train_samples*1.5
assert trainer.global_step >= math.floor(num_train_samples * 1.5) and \
trainer.current_epoch > 0, "Model did not train for at least min_steps"
def test_benchmark_option(tmpdir):
"""Verify benchmark option."""
model = EvalModelTemplate()
model.val_dataloader = model.val_dataloader__multiple
# verify torch.backends.cudnn.benchmark is not turned on
assert not torch.backends.cudnn.benchmark
# fit model
trainer = Trainer(
default_root_dir=tmpdir,
max_epochs=1,
benchmark=True,
)
result = trainer.fit(model)
# verify training completed
assert result == 1
# verify torch.backends.cudnn.benchmark is not turned off
assert torch.backends.cudnn.benchmark
@pytest.mark.parametrize('ckpt_path', [None, 'best', 'specific'])
@pytest.mark.parametrize('save_top_k', [-1, 0, 1, 2])
def test_test_checkpoint_path(tmpdir, ckpt_path, save_top_k):
hparams = EvalModelTemplate.get_default_hparams()
model = EvalModelTemplate(**hparams)
trainer = Trainer(
max_epochs=2,
progress_bar_refresh_rate=0,
default_root_dir=tmpdir,
checkpoint_callback=ModelCheckpoint(monitor='early_stop_on', save_top_k=save_top_k),
)
trainer.fit(model)
if ckpt_path == 'best':
# ckpt_path is 'best', meaning we load the best weights
if save_top_k == 0:
with pytest.raises(MisconfigurationException, match='.*is not configured to save the best.*'):
trainer.test(ckpt_path=ckpt_path)
else:
trainer.test(ckpt_path=ckpt_path)
assert trainer.tested_ckpt_path == trainer.checkpoint_callback.best_model_path
elif ckpt_path is None:
# ckpt_path is None, meaning we don't load any checkpoints and
# use the weights from the end of training
trainer.test(ckpt_path=ckpt_path)
assert trainer.tested_ckpt_path is None
else:
# specific checkpoint, pick one from saved ones
if save_top_k == 0:
with pytest.raises(FileNotFoundError):
trainer.test(ckpt_path='random.ckpt')
else:
ckpt_path = str(list((Path(tmpdir) / f'lightning_logs/version_{trainer.logger.version}/checkpoints').iterdir())[0].absolute())
trainer.test(ckpt_path=ckpt_path)
assert trainer.tested_ckpt_path == ckpt_path
def test_disabled_validation(tmpdir):
"""Verify that `limit_val_batches=0` disables the validation loop unless `fast_dev_run=True`."""
class CurrentModel(EvalModelTemplate):
validation_step_invoked = False
validation_epoch_end_invoked = False
def validation_step(self, *args, **kwargs):
self.validation_step_invoked = True
return super().validation_step(*args, **kwargs)
def validation_epoch_end(self, *args, **kwargs):
self.validation_epoch_end_invoked = True
return super().validation_epoch_end(*args, **kwargs)
hparams = EvalModelTemplate.get_default_hparams()
model = CurrentModel(**hparams)
trainer_options = dict(
default_root_dir=tmpdir,
progress_bar_refresh_rate=0,
max_epochs=2,
limit_train_batches=0.4,
limit_val_batches=0.0,
fast_dev_run=False,
)
trainer = Trainer(**trainer_options)
result = trainer.fit(model)
# check that limit_val_batches=0 turns off validation
assert result == 1, 'training failed to complete'
assert trainer.current_epoch == 1
assert not model.validation_step_invoked, \
'`validation_step` should not run when `limit_val_batches=0`'
assert not model.validation_epoch_end_invoked, \
'`validation_epoch_end` should not run when `limit_val_batches=0`'
# check that limit_val_batches has no influence when fast_dev_run is turned on
model = CurrentModel(**hparams)
trainer_options.update(fast_dev_run=True)
trainer = Trainer(**trainer_options)
result = trainer.fit(model)
assert result == 1, 'training failed to complete'
assert trainer.current_epoch == 0
assert model.validation_step_invoked, \
'did not run `validation_step` with `fast_dev_run=True`'
assert model.validation_epoch_end_invoked, \
'did not run `validation_epoch_end` with `fast_dev_run=True`'
def test_nan_loss_detection(tmpdir):
class CurrentModel(EvalModelTemplate):
test_batch_inf_loss = 8
def training_step(self, batch, batch_idx, optimizer_idx=None):
output = super().training_step(batch, batch_idx, optimizer_idx)
if batch_idx == self.test_batch_inf_loss:
if isinstance(output, dict):
output['loss'] *= torch.tensor(math.inf) # make loss infinite
else:
output /= 0
return output
model = CurrentModel()
# fit model
trainer = Trainer(
default_root_dir=tmpdir,
max_steps=(model.test_batch_inf_loss + 1),
terminate_on_nan=True,
)
with pytest.raises(ValueError, match=r'.*The loss returned in `training_step` is nan or inf.*'):
trainer.fit(model)
assert trainer.global_step == model.test_step_inf_loss
for param in model.parameters():
assert torch.isfinite(param).all()
def test_nan_params_detection(tmpdir):
class CurrentModel(EvalModelTemplate):
test_batch_nan = 8
def on_after_backward(self):
if self.global_step == self.test_batch_nan:
# simulate parameter that became nan
torch.nn.init.constant_(self.c_d1.bias, math.nan)
model = CurrentModel()
trainer = Trainer(
default_root_dir=tmpdir,
max_steps=(model.test_batch_nan + 1),
terminate_on_nan=True,
)
with pytest.raises(ValueError, match=r'.*Detected nan and/or inf values in `c_d1.bias`.*'):
trainer.fit(model)
assert trainer.global_step == model.test_batch_nan
# after aborting the training loop, model still has nan-valued params
params = torch.cat([param.view(-1) for param in model.parameters()])
assert not torch.isfinite(params).all()
def test_trainer_interrupted_flag(tmpdir):
"""Test the flag denoting that a user interrupted training."""
model = EvalModelTemplate()
class InterruptCallback(Callback):
def __init__(self):
super().__init__()
def on_train_batch_start(self, trainer, pl_module, batch, batch_idx, dataloader_idx):
raise KeyboardInterrupt
class HandleInterruptCallback(Callback):
def __init__(self):
super().__init__()
self.exc_info = None
def on_keyboard_interrupt(self, trainer, pl_module):
self.exc_info = sys.exc_info()
interrupt_callback = InterruptCallback()
handle_interrupt_callback = HandleInterruptCallback()
trainer = Trainer(
callbacks=[interrupt_callback, handle_interrupt_callback],
max_epochs=1,
limit_val_batches=0.1,
limit_train_batches=0.2,
progress_bar_refresh_rate=0,
logger=False,
default_root_dir=tmpdir,
)
assert not trainer.interrupted
assert handle_interrupt_callback.exc_info is None
trainer.fit(model)
assert trainer.interrupted
assert isinstance(handle_interrupt_callback.exc_info[1], KeyboardInterrupt)
def test_gradient_clipping(tmpdir):
"""
Test gradient clipping
"""
model = EvalModelTemplate()
# test that gradient is clipped correctly
def _optimizer_step(*args, **kwargs):
parameters = model.parameters()
grad_norm = torch.norm(torch.stack([torch.norm(p.grad.detach(), 2) for p in parameters]), 2)
assert (grad_norm - 1.0).abs() < 0.01, "Gradient norm != 1.0: {grad_norm}".format(grad_norm=grad_norm)
trainer = Trainer(
max_steps=1,
max_epochs=1,
gradient_clip_val=1.0,
default_root_dir=tmpdir,
)
# for the test
model.optimizer_step = _optimizer_step
model.prev_called_batch_idx = 0
trainer.fit(model)
@pytest.mark.skipif(not torch.cuda.is_available(), reason="test requires GPU machine")
@pytest.mark.skipif(not NATIVE_AMP_AVALAIBLE, reason="test requires native AMP.")
def test_gradient_clipping_fp16(tmpdir):
"""
Test gradient clipping with fp16
"""
model = EvalModelTemplate()
# test that gradient is clipped correctly
def _optimizer_step(*args, **kwargs):
parameters = model.parameters()
grad_norm = torch.norm(torch.stack([torch.norm(p.grad.detach(), 2) for p in parameters]), 2)
assert (grad_norm - 1.0).abs() < 0.01, "Gradient norm != 1.0: {grad_norm}".format(grad_norm=grad_norm)
trainer = Trainer(
max_steps=1,
max_epochs=1,
precision=16,
gpus=1,
gradient_clip_val=1.0,
default_root_dir=tmpdir,
)
# for the test
model.optimizer_step = _optimizer_step
model.prev_called_batch_idx = 0
trainer.fit(model)
def test_gpu_choice(tmpdir):
trainer_options = dict(
default_root_dir=tmpdir,
)
# Only run if CUDA is available
if not torch.cuda.is_available():
return
num_gpus = torch.cuda.device_count()
Trainer(**trainer_options, gpus=num_gpus, auto_select_gpus=True)
with pytest.raises(RuntimeError, match=r'.*No GPUs available.*'):
Trainer(**trainer_options, gpus=num_gpus + 1, auto_select_gpus=True)
@pytest.mark.parametrize(['tpu_cores', 'expected_tpu_id', 'error_expected'], [
pytest.param(1, None, False),
pytest.param(8, None, False),
pytest.param([1], 1, False),
pytest.param([8], 8, False),
pytest.param('1,', 1, False),
pytest.param('1', None, False),
pytest.param('9, ', 9, True),
pytest.param([9], 9, True),
pytest.param([0], 0, True),
pytest.param(2, None, True),
pytest.param(10, None, True),
])
def test_tpu_choice(tmpdir, tpu_cores, expected_tpu_id, error_expected):
if error_expected:
with pytest.raises(MisconfigurationException, match=r'.*tpu_cores` can only be 1, 8 or [<1-8>]*'):
Trainer(default_root_dir=tmpdir, tpu_cores=tpu_cores, auto_select_gpus=True)
else:
trainer = Trainer(default_root_dir=tmpdir, tpu_cores=tpu_cores, auto_select_gpus=True)
assert trainer.tpu_id == expected_tpu_id
@pytest.mark.parametrize(['limit_val_batches'], [
pytest.param(0.0), # this should run no sanity checks
pytest.param(1),
pytest.param(1.0),
pytest.param(0.5),
pytest.param(5),
])
def test_num_sanity_val_steps(tmpdir, limit_val_batches):
"""
Test that the number of sanity check batches is clipped to `limit_val_batches`.
"""
model = EvalModelTemplate()
model.validation_step = model.validation_step__multiple_dataloaders
model.validation_epoch_end = model.validation_epoch_end__multiple_dataloaders
num_sanity_val_steps = 4
trainer = Trainer(
default_root_dir=tmpdir,
num_sanity_val_steps=num_sanity_val_steps,
limit_val_batches=limit_val_batches,
max_steps=1,
)
assert trainer.num_sanity_val_steps == num_sanity_val_steps
with patch.object(
trainer.evaluation_loop, 'evaluation_step', wraps=trainer.evaluation_loop.evaluation_step
) as mocked:
val_dataloaders = model.val_dataloader__multiple_mixed_length()
trainer.fit(model, val_dataloaders=val_dataloaders)
assert mocked.call_count == sum(
min(num_sanity_val_steps, num_batches) for num_batches in trainer.num_val_batches
)
@pytest.mark.parametrize(['limit_val_batches'], [
pytest.param(0.0), # this should run no sanity checks
pytest.param(1),
pytest.param(1.0),
pytest.param(0.3),
])
def test_num_sanity_val_steps_neg_one(tmpdir, limit_val_batches):
"""
Test that `num_sanity_val_steps=-1` runs through all validation data once, and as many batches as
limited by `limit_val_batches` Trainer argument.
"""
model = EvalModelTemplate()
model.validation_step = model.validation_step__multiple_dataloaders
model.validation_epoch_end = model.validation_epoch_end__multiple_dataloaders
trainer = Trainer(
default_root_dir=tmpdir,
num_sanity_val_steps=-1,
limit_val_batches=limit_val_batches,
max_steps=1,
)
assert trainer.num_sanity_val_steps == float('inf')
with patch.object(
trainer.evaluation_loop, 'evaluation_step', wraps=trainer.evaluation_loop.evaluation_step
) as mocked:
val_dataloaders = model.val_dataloader__multiple()
trainer.fit(model, val_dataloaders=val_dataloaders)
assert mocked.call_count == sum(trainer.num_val_batches)
@pytest.mark.parametrize("trainer_kwargs,expected", [
pytest.param(
dict(distributed_backend=None, gpus=None),
dict(use_dp=False, use_ddp=False, use_ddp2=False, num_gpus=0, on_gpu=False, use_single_gpu=False, num_processes=1)
),
pytest.param(
dict(distributed_backend="dp", gpus=None),
dict(use_dp=False, use_ddp=False, use_ddp2=False, num_gpus=0, on_gpu=False, use_single_gpu=False, num_processes=1)
),
pytest.param(
dict(distributed_backend="dp", gpus=None),
dict(use_dp=False, use_ddp=False, use_ddp2=False, num_gpus=0, on_gpu=False, use_single_gpu=False, num_processes=1)
),
pytest.param(
dict(distributed_backend="ddp", gpus=None),
dict(use_dp=False, use_ddp=False, use_ddp2=False, num_gpus=0, on_gpu=False, use_single_gpu=False, num_processes=1)
),
pytest.param(
dict(distributed_backend="ddp", num_processes=2, gpus=None),
dict(use_dp=False, use_ddp=True, use_ddp2=False, num_gpus=0, on_gpu=False, use_single_gpu=False, num_processes=2)
),
pytest.param(
dict(distributed_backend="ddp", num_nodes=2, gpus=None),
dict(use_dp=False, use_ddp=True, use_ddp2=False, num_gpus=0, on_gpu=False, use_single_gpu=False, num_processes=1)
),
pytest.param(
dict(distributed_backend="ddp_cpu", num_processes=2, gpus=None),
dict(use_dp=False, use_ddp=True, use_ddp2=False, num_gpus=0, on_gpu=False, use_single_gpu=False, num_processes=2)
),
pytest.param(
dict(distributed_backend="ddp2", gpus=None),
dict(use_dp=False, use_ddp=False, use_ddp2=False, num_gpus=0, on_gpu=False, use_single_gpu=False, num_processes=1)
),
pytest.param(
dict(distributed_backend=None, gpus=1),
dict(use_dp=False, use_ddp=False, use_ddp2=False, num_gpus=1, on_gpu=True, use_single_gpu=True, num_processes=1),
marks=[pytest.mark.skipif(torch.cuda.device_count() == 0, reason="GPU needed")]
),
pytest.param(
dict(distributed_backend="dp", gpus=1),
dict(use_dp=True, use_ddp=False, use_ddp2=False, num_gpus=1, on_gpu=True, use_single_gpu=True, num_processes=1),
marks=[pytest.mark.skipif(torch.cuda.device_count() == 0, reason="GPU needed")]
),
pytest.param(
dict(distributed_backend="ddp", gpus=1),
dict(use_dp=False, use_ddp=True, use_ddp2=False, num_gpus=1, on_gpu=True, use_single_gpu=True, num_processes=1),
marks=[pytest.mark.skipif(torch.cuda.device_count() == 0, reason="GPU needed")]
),
pytest.param(
dict(distributed_backend="ddp_cpu", num_processes=2, gpus=1),
dict(use_dp=False, use_ddp=True, use_ddp2=False, num_gpus=0, on_gpu=False, use_single_gpu=False, num_processes=2),
marks=[pytest.mark.skipif(torch.cuda.device_count() == 0, reason="GPU needed")]
),
pytest.param(
dict(distributed_backend="ddp2", gpus=1),
dict(use_dp=False, use_ddp=False, use_ddp2=True, num_gpus=1, on_gpu=True, use_single_gpu=False, num_processes=1),
marks=[pytest.mark.skipif(torch.cuda.device_count() == 0, reason="GPU needed")]
),
pytest.param(
dict(distributed_backend=None, gpus=2),
dict(use_dp=False, use_ddp=True, use_ddp2=False, num_gpus=2, on_gpu=True, use_single_gpu=False, num_processes=2),
marks=[pytest.mark.skipif(torch.cuda.device_count() < 2, reason="Multiple GPUs needed")]
),
pytest.param(
dict(distributed_backend="dp", gpus=2),
dict(use_dp=True, use_ddp=False, use_ddp2=False, num_gpus=2, on_gpu=True, use_single_gpu=False, num_processes=1),
marks=[pytest.mark.skipif(torch.cuda.device_count() < 2, reason="Multiple GPUs needed")]
),
pytest.param(
dict(distributed_backend="ddp", gpus=2),
dict(use_dp=False, use_ddp=True, use_ddp2=False, num_gpus=2, on_gpu=True, use_single_gpu=False, num_processes=2),
marks=[pytest.mark.skipif(torch.cuda.device_count() < 2, reason="Multiple GPUs needed")]
),
pytest.param(
dict(distributed_backend="ddp2", gpus=2),
dict(use_dp=False, use_ddp=False, use_ddp2=True, num_gpus=2, on_gpu=True, use_single_gpu=False, num_processes=1),
marks=[pytest.mark.skipif(torch.cuda.device_count() < 2, reason="Multiple GPUs needed")]
),
])
def test_trainer_config(trainer_kwargs, expected):
trainer = Trainer(**trainer_kwargs)
assert trainer.use_dp is expected["use_dp"]
assert trainer.use_ddp is expected["use_ddp"]
assert trainer.use_ddp2 is expected["use_ddp2"]
assert trainer.num_gpus == expected["num_gpus"]
assert trainer.on_gpu is expected["on_gpu"]
assert trainer.use_single_gpu is expected["use_single_gpu"]
assert trainer.num_processes == expected["num_processes"]
def test_trainer_subclassing():
model = EvalModelTemplate()
# First way of pulling out args from signature is to list them
class TrainerSubclass(Trainer):
def __init__(self, custom_arg, *args, custom_kwarg='test', **kwargs):
super().__init__(*args, **kwargs)
self.custom_arg = custom_arg
self.custom_kwarg = custom_kwarg
trainer = TrainerSubclass(123, custom_kwarg='custom', fast_dev_run=True)
result = trainer.fit(model)
assert result == 1
assert trainer.custom_arg == 123
assert trainer.custom_kwarg == 'custom'
assert trainer.fast_dev_run
# Second way is to pop from the dict
# It's a special case because Trainer does not have any positional args
class TrainerSubclass(Trainer):
def __init__(self, **kwargs):
self.custom_arg = kwargs.pop('custom_arg', 0)
self.custom_kwarg = kwargs.pop('custom_kwarg', 'test')
super().__init__(**kwargs)
trainer = TrainerSubclass(custom_kwarg='custom', fast_dev_run=True)
result = trainer.fit(model)
assert result == 1
assert trainer.custom_kwarg == 'custom'
assert trainer.fast_dev_run
# when we pass in an unknown arg, the base class should complain
with pytest.raises(TypeError, match=r"__init__\(\) got an unexpected keyword argument 'abcdefg'"):
TrainerSubclass(abcdefg='unknown_arg')
@pytest.mark.parametrize('trainer_params', [
OmegaConf.create({'max_epochs': 1, 'gpus': 1}),
OmegaConf.create({'max_epochs': 1, 'gpus': [0]}),
])
@pytest.mark.skipif(not torch.cuda.is_available(), reason="test requires GPU machine")
def test_trainer_omegaconf(trainer_params):
Trainer(**trainer_params)
def test_trainer_pickle(tmpdir):
trainer = Trainer(
max_epochs=1,
default_root_dir=tmpdir,
)
pickle.dumps(trainer)
cloudpickle.dumps(trainer)
def test_trainer_setup_call(tmpdir):
"""Test setup call with fit and test call."""
class CurrentModel(EvalModelTemplate):
def setup(self, stage):
self.stage = stage
class TrainerSubclass(Trainer):
def setup(self, stage):
self.stage = stage
model = CurrentModel()
# fit model
trainer = TrainerSubclass(
default_root_dir=tmpdir,
max_epochs=1,
checkpoint_callback=False
)
trainer.fit(model)
assert trainer.stage == 'fit'
assert trainer.get_model().stage == 'fit'
trainer.test(ckpt_path=None)
assert trainer.stage == 'test'
assert trainer.get_model().stage == 'test'
@pytest.mark.parametrize("train_batches, max_steps, log_interval", [
pytest.param(10, 10, 1),
pytest.param(3, 10, 1),
pytest.param(3, 10, 5),
])
@patch("pytorch_lightning.loggers.tensorboard.TensorBoardLogger.log_metrics")
def test_log_every_n_steps(log_metrics_mock, tmpdir, train_batches, max_steps, log_interval):
model = EvalModelTemplate()
trainer = Trainer(
default_root_dir=tmpdir,
log_every_n_steps=log_interval,
flush_logs_every_n_steps=log_interval,
limit_train_batches=train_batches,
limit_val_batches=0,
max_steps=max_steps,
)
trainer.fit(model)
expected_calls = [call(metrics=ANY, step=s) for s in range(log_interval - 1, max_steps, log_interval)]
log_metrics_mock.assert_has_calls(expected_calls)