import os import sys import numpy as np from time import sleep import torch from test_tube import HyperOptArgumentParser, Experiment, SlurmCluster from pytorch_lightning.models.trainer import Trainer from pytorch_lightning.utils.arg_parse import add_default_args from pytorch_lightning.callbacks import EarlyStopping, ModelCheckpoint SEED = 2334 torch.manual_seed(SEED) np.random.seed(SEED) # --------------------- # DEFINE MODEL HERE # --------------------- from lightning_module_template import LightningTemplateModel # --------------------- AVAILABLE_MODELS = { 'model_template': LightningTemplateModel } """ Allows training by using command line arguments Run by: # TYPE YOUR RUN COMMAND HERE """ def main_local(hparams): main(hparams, None, None) def main(hparams, cluster, results_dict): """ Main training routine specific for this project :param hparams: :return: """ path = 'emv_' + os.environ['SLURM_CLUSTER_NAME'] os.makedirs(os.path.join(hparams.test_tube_save_path, path), exist_ok=True) # ------------------------ # 1 INIT LIGHTNING MODEL # ------------------------ print('loading model...') model = LightningTemplateModel(hparams) print('model built') # ------------------------ # 2 INIT TEST TUBE EXP # ------------------------ exp = Experiment( name=hyperparams.experiment_name, save_dir=hyperparams.test_tube_save_path, autosave=False, description='test demo', version=cluster.hpc_exp_number ) exp.argparse(hparams) exp.save() # ------------------------ # 3 DEFINE CALLBACKS # ------------------------ model_save_path = '{}/{}/{}'.format(hparams.model_save_path, exp.name, exp.version) early_stop = EarlyStopping( monitor='val_acc', patience=3, verbose=True, mode='max' ) checkpoint = ModelCheckpoint( filepath=model_save_path, save_best_only=True, verbose=True, monitor='val_loss', mode='min' ) # ------------------------ # 4 INIT TRAINER # ------------------------ trainer = Trainer( experiment=exp, cluster=cluster, checkpoint_callback=checkpoint, early_stop_callback=early_stop, gpus=hparams.gpus, nb_gpu_nodes=hyperparams.nb_gpu_nodes ) # ------------------------ # 5 START TRAINING # ------------------------ trainer.fit(model) def optimize_on_cluster(hyperparams): # enable cluster training # log all scripts to the test tube folder cluster = SlurmCluster( hyperparam_optimizer=hyperparams, log_path=hyperparams.slurm_log_path, ) # email for cluster coms cluster.notify_job_status(email='add_email_here', on_done=True, on_fail=True) # configure cluster cluster.per_experiment_nb_gpus = hyperparams.per_experiment_nb_gpus cluster.per_experiment_nb_nodes = hyperparams.nb_gpu_nodes cluster.job_time = '2:00:00' cluster.gpu_type = 'volta' cluster.memory_mb_per_node = 0 # any modules for code to run in env cluster.add_command('source activate lightning') # run only on 32GB voltas cluster.add_slurm_cmd(cmd='constraint', value='volta32gb', comment='use 32gb gpus') cluster.add_slurm_cmd(cmd='partition', value=hyperparams.gpu_partition, comment='use 32gb gpus') # run hopt print('submitting jobs...') cluster.optimize_parallel_cluster_gpu( main, nb_trials=hyperparams.nb_hopt_trials, job_name=hyperparams.experiment_name ) if __name__ == '__main__': # use default args root_dir = os.path.dirname(os.path.realpath(__file__)) demo_log_dir = os.path.join(root_dir, 'pt_lightning_demo_logs') checkpoint_dir = os.path.join(demo_log_dir, 'model_weights') test_tube_dir = os.path.join(demo_log_dir, 'test_tube_data') slurm_out_dir = os.path.join(demo_log_dir, 'slurm_scripts') parent_parser = HyperOptArgumentParser(strategy='grid_search', add_help=False) # cluster args not defined inside the model parent_parser.add_argument('--gpu_partition', type=str) parent_parser.add_argument('--per_experiment_nb_gpus', type=int) parent_parser.add_argument('--nb_gpu_nodes', type=int, default=1) parent_parser.add_argument('--test_tube_save_path', type=str, default=test_tube_dir) parent_parser.add_argument('--slurm_log_path', type=str, default=slurm_out_dir) parent_parser.add_argument('--model_save_path', type=str, default=checkpoint_dir) parent_parser.add_argument('--experiment_name', type=str, default='pt_lightning_exp_a') parent_parser.add_argument('--gpus', type=str, default='-1') parent_parser.add_argument('--nb_hopt_trials', type=int, default=1) # allow model to overwrite or extend args parser = LightningTemplateModel.add_model_specific_args(parent_parser, root_dir) hyperparams = parser.parse_args() # --------------------- # RUN TRAINING # --------------------- # run on HPC cluster print('RUNNING ON SLURM CLUSTER') optimize_on_cluster(hyperparams)