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47 Commits

Author SHA1 Message Date
Jirka Borovec b341b53f70
deprecate metrics pkg (#6505) 
* deprecate metrics

* examples

* req

* docs

* Apply suggestions from code review

Co-authored-by: Carlos Mocholí <carlossmocholi@gmail.com>
Co-authored-by: Nicki Skafte <skaftenicki@gmail.com>

* pep8

Co-authored-by: Carlos Mocholí <carlossmocholi@gmail.com>
Co-authored-by: Nicki Skafte <skaftenicki@gmail.com>
 2021-03-15 14:39:38 +00:00
Jirka Borovec ede1227c39 hotfix: drop bad pyyaml version (#5606) 
* drop potetionaly bad version

* *
 2021-02-04 20:55:40 +01:00
Jirka Borovec 304f9c5bca
Fix loading yaml (#5619) 
* fix yaml

* chlog
 2021-01-25 10:17:55 -05:00
Jirka Borovec 671887fd9b
hotfix: drop pyyaml 5.4.* [feat-1.2] (#5609) 2021-01-22 02:43:31 +00:00
Jirka Borovec 7e4d6cbe48
set minimal req. PT 1.4 (#5418) 
* set minimal req. PT 1.4

* chlog
 2021-01-12 19:15:35 -05:00
tarepan bb366232e7 Add non-existing resume_from_checkpoint acceptance for auto-resubmit (#4402) 
* Add empty resume_from_checkpoint acceptance #4366

* Fix general error catch with focused file check

* Add fsspec HTTP extras

Add fsspec's HTTPFileSystem  support through http extras.
pl has supported remote http file (e.g. #2925),
so this commit do not add new functionality.

* Fix potential too much logging in DDP

* Add PR changelog

* Add well-written argument explanation

Co-authored-by: Adrian Wälchli <aedu.waelchli@gmail.com>

* Fix DDP-compatible restore logging

Notify from where the states are restored.
This feature temporally deleted as a result of PR review.
With succeeding review, added with DDP compatibility.

* Fix utility import pathes

* Refactor load step commentaries

* Refactor hpc ckpt suffix acquisition

* Refactor restore/hpc_load match

* Refactor hpc load trial

* Refactor checkpoint dir check

* Refactor unneeded function nest

* Refactor nested If

* Refactor duplicated cache clear

* Refactor attempt flow with if/elif

* Fix pip8

* Refactor hook commentary

Co-authored-by: chaton <thomas@grid.ai>

* Fix pep8

* Refactor hpc load checkpoint path acquisition

* Fix pip8

* Fix typo

Co-authored-by: Adrian Wälchli <aedu.waelchli@gmail.com>

* Fix typo

Co-authored-by: Adrian Wälchli <aedu.waelchli@gmail.com>

* Fix doc

Co-authored-by: Adrian Wälchli <aedu.waelchli@gmail.com>

* Refactor None Union type with Optional

* Fix build-doc CI failure debuged in #5329

* Fix fsspec import during build-doc #5329

* Fix test epoch

Co-authored-by: Adrian Wälchli <aedu.waelchli@gmail.com>

* Fix test with latest test models

* .

Co-authored-by: Adrian Wälchli <aedu.waelchli@gmail.com>
Co-authored-by: chaton <thomas@grid.ai>
Co-authored-by: Jirka Borovec <Borda@users.noreply.github.com>
Co-authored-by: Sean Naren <sean.narenthiran@gmail.com>
Co-authored-by: Roger Shieh <sh.rog@protonmail.ch>

(cherry picked from commit b0051e8c03)
 2021-01-06 12:55:38 +01:00
Jeff Yang 563f9214fa
upgrade min deps (#4934) 
* upgrade min deps

* unused

* replace torchvision and torchtext

* loggers

* freeze pip

Co-authored-by: Jirka Borovec <Borda@users.noreply.github.com>
Co-authored-by: Jirka Borovec <jirka.borovec@seznam.cz>
Co-authored-by: Sean Naren <sean.narenthiran@gmail.com>
 2020-12-01 17:19:44 +00:00
Jirka Borovec bd6c413829
Conda: PT 1.8 (#3833) 
* PT 1.8

* unfreeze PT

* drop nightly from full

* add PT 1.8 to workflow

* readme table

* cuda

* skip cuda

* test 1.8

* unfreeze torch vision

Co-authored-by: ydcjeff <ydcjeff@outlook.com>
Co-authored-by: chaton <thomas@grid.ai>
Co-authored-by: Nicki Skafte <skaftenicki@gmail.com>
 2020-11-12 15:03:43 +01:00
Jeff Yang d537485e41
lock pytorch nightly version (#4469) 2020-11-01 23:47:51 +05:30
Jirka Borovec d3567c33a6
move base req. to root (#4219) 
* move base req. to root

* check-manifest

* check-manifest

* manifest

* req
 2020-10-18 20:40:18 +02:00
Jirka Borovec bfaabd7b7f
clean requirements (#2128) 
* clean requirements

* missing

* missing

* req

* min

* default >> base

* base.txt
 2020-06-13 10:15:22 -04:00
Justus Schock bd49b07fbb
Rework of Sklearn Metrics (#1327) 
* Create utils.py

* Create __init__.py

* redo sklearn metrics

* add some more metrics

* add sklearn metrics

* Create __init__.py

* redo sklearn metrics

* New metric classes (#1326)

* Create metrics package

* Create metric.py

* Create utils.py

* Create __init__.py

* add tests for metric utils

* add docstrings for metrics utils

* add function to recursively apply other function to collection

* add tests for this function

* update test

* Update pytorch_lightning/metrics/metric.py

Co-Authored-By: Jirka Borovec <Borda@users.noreply.github.com>

* update metric name

* remove example docs

* fix tests

* add metric tests

* fix to tensor conversion

* fix apply to collection

* Update CHANGELOG.md

* Update pytorch_lightning/metrics/metric.py

Co-Authored-By: Jirka Borovec <Borda@users.noreply.github.com>

* remove tests from init

* add missing type annotations

* rename utils to convertors

* Create metrics.rst

* Update index.rst

* Update index.rst

* Update pytorch_lightning/metrics/convertors.py

Co-Authored-By: Jirka Borovec <Borda@users.noreply.github.com>

* Update pytorch_lightning/metrics/convertors.py

Co-Authored-By: Jirka Borovec <Borda@users.noreply.github.com>

* add doctest example

* rename file and fix imports

* added parametrized test

* replace lambda with inlined function

* rename apply_to_collection to apply_func

* Separated class description from init args

* Apply suggestions from code review

Co-Authored-By: Jirka Borovec <Borda@users.noreply.github.com>

* adjust random values

* suppress output when seeding

* remove gpu from doctest

* Add requested changes and add ellipsis for doctest

* forgot to push these files...

* add explicit check for dtype to convert to

* fix ddp tests

* remove explicit ddp destruction

Co-authored-by: Jirka Borovec <Borda@users.noreply.github.com>

* add sklearn metrics

* start adding sklearn tests

* fix typo

* return x and y only for curves

* fix typo

* add missing tests for sklearn funcs

* imports

* __all__

* imports

* fix sklearn arguments

* fix imports

* update requirements

* Update CHANGELOG.md

* Update test_sklearn_metrics.py

* formatting

* formatting

* format

* fix all warnings and formatting problems

* Update environment.yml

* Update requirements-extra.txt

* Update environment.yml

* Update requirements-extra.txt

* fix all warnings and formatting problems

* Update CHANGELOG.md

* docs

* inherit

* docs inherit.

* docs

* Apply suggestions from code review

Co-authored-by: Nicki Skafte <skaftenicki@gmail.com>

* docs

* req

* min

* Apply suggestions from code review

Co-authored-by: Tullie Murrell <tulliemurrell@gmail.com>
Co-authored-by: Jirka Borovec <Borda@users.noreply.github.com>
Co-authored-by: Jirka <jirka@pytorchlightning.ai>
Co-authored-by: Adrian Wälchli <aedu.waelchli@gmail.com>
Co-authored-by: Nicki Skafte <skaftenicki@gmail.com>
Co-authored-by: Tullie Murrell <tulliemurrell@gmail.com>
 2020-06-10 15:43:12 +02:00
Jirka Borovec d610f3bb53
set min PT 1.3 (#1917) 
* set min PT 1.3

* circleCI

* mergify

* min

* chlog

* skip
 2020-05-22 07:14:08 -04:00
So Uchida 22d7d03118
Replace meta_tags.csv with hparams.yaml (#1271) 
* Add support for hierarchical dict

* Support nested Namespace

* Add docstring

* Migrate hparam flattening to each logger

* Modify URLs in CHANGELOG

* typo

* Simplify the conditional branch about Namespace

Co-Authored-By: Jirka Borovec <Borda@users.noreply.github.com>

* Update CHANGELOG.md

Co-Authored-By: Jirka Borovec <Borda@users.noreply.github.com>

* added examples section to docstring

* renamed _dict -> input_dict

* mata_tags.csv -> hparams.yaml

* code style fixes

* add pyyaml

* remove unused import

* create the member NAME_HPARAMS_FILE

* improve tests

* Update tensorboard.py

* pass the local test w/o relavents of Horovod

* formatting

* update dependencies

* fix dependencies

* Apply suggestions from code review

* add savings

* warn

* docstrings

* tests

* Apply suggestions from code review

* saving

* Apply suggestions from code review

* use default

* remove logging

* typo fixes

* update docs

* update CHANGELOG

* clean imports

* add blank lines

* Update pytorch_lightning/core/lightning.py

Co-authored-by: Adrian Wälchli <aedu.waelchli@gmail.com>

* Update pytorch_lightning/core/lightning.py

Co-authored-by: Adrian Wälchli <aedu.waelchli@gmail.com>

* back to namespace

* add docs

* test fix

* update dependencies

* add space

Co-authored-by: Jirka Borovec <Borda@users.noreply.github.com>
Co-authored-by: Adrian Wälchli <aedu.waelchli@gmail.com>
 2020-05-13 15:05:15 +02:00
Jirka Borovec 45d671a4a8
CI: split tests-examples (#990) 
* CI: split tests-examples

* tests without template

* comment depends

* CircleCI typo

* add doctest

* update test req.

* CI tests

* setup macOS

* longer train

* lover pred acc

* fix model

* rename default model

* lower tests acc

* typo

* imports

* fix test optimizer

* update calls

* fix Win

* lower Drone image

* fix call

* pytorch image

* fix test

* add dev image

* add dev image

* update image

* drone volume

* lint

* update test notes

* rename tests/models >> tests/base

* group models

* conftest

* optim imports

* typos

* fix import

* fix tests

* install AMP

* tests

* fix import
 2020-03-25 07:46:27 -04:00
Jeremy Jordan 36274bed49
ensure reset method works in notebooks (#1093) 2020-03-19 09:23:18 -04:00
Jirka Borovec ed26c177b2
drop sklearn dependency (#801) 2020-02-11 00:21:35 -05:00
Jirka Borovec af44583050
drop torchvision, tests only (#797) 
* drop torchvision, tests only

* manifest

* move test utils
 2020-02-10 22:47:18 -05:00
Nicki Skafte 9a6838d349
Removed dependency on pandas, instead use generic csv (#736) 
* removed dependency on pandas, instead use generic csv

* remove mnist files, pushed by accident

* added docstring and small fixes

* Update memory.py

* fixed path

Co-authored-by: William Falcon <waf2107@columbia.edu>
 2020-01-29 14:52:23 -05:00
Jirka Borovec f72e354ee6 fixing TensorBoard (#687) 
* flake8

* fix typo

* fix tensorboardlogger
drop test_tube dependence

* formatting

* fix tensorboard & tests

* upgrade Tensorboard

* test formatting separately

* try to fix JIT issue

* add tests for 1.4
 2020-01-16 07:22:29 -05:00
William Falcon 88b750a018
default logger is now tensorboard (#609) 
* refactor

* refactor

* refactor

* made tensorboard the default not test-tube
 2020-01-14 14:40:41 -05:00
Verena Haunschmid 9ac91adea9 Update requirements.txt (#664) 
Fix typo 'buildins' -> 'builtins'
 2020-01-05 14:34:44 -05:00
Jirka Borovec 89ececb32b fix for pyTorch 1.1 (#552) 
* min pyTorch 1.1

* try fixed test-tube

* try fixed test-tube

* try fixed test-tube

* cleaning

* Update requirements.txt
 2019-12-01 03:42:33 -05:00
Jirka Borovec f2191b0cdf fix for pyTorch 1.2 (#549) 
* min pytorch 1.2

* fix IterableDataset

* upgrade torchvision

* fix msg
 2019-11-26 10:58:50 -05:00
Jirka Borovec 462788738b CI buils with minimal and latest requirements (#500) 
* install nim req.

* update requirements

* drop Cython
 2019-11-25 06:39:19 -05:00
Jirka Borovec 7aaaefc4d9 Add circle CI for building PyTorch 1.1/1.2/1.3 (#502) 
* add CircleCI config

* fix CircleCI

* fix CircleCI
 2019-11-13 06:03:13 -05:00
Jirka Borovec 1fd1e42aa6 Fix setup-doc for pypi (#472) 
* add Twine to CI

* freeze Twine

* freeze Twine

* minor refactoring

* try another

* fix req.

* update README

* fix __doc__

* fix multiple req. test-tube
 2019-11-09 00:59:14 -05:00
William Falcon e41bf0a047 fix install 2019-11-07 08:34:32 -05:00
Jirka Borovec 37647d835a add package info (#395) 
* add package info #358

* Update __init__.py

* wrap package info

* update CI

* fix package info

* fix for #388

* prune duplicated configs

* fix install

* use req from file

* move info to sep. module
drop comments from req

* add setup req.

* add setup req.

* update get info

* refactor init

* update pip

* fix failing on buildins

* fix failing open

* fix test imports

* fix tests

* fix pep8
 2019-10-28 18:41:13 -04:00
Hendrik Schröter dd45896e78 Allow newer torch versions (#269) 2019-10-01 05:24:49 -04:00
Jiri BOROVEC 421c4fab7d fix appveyor - install pytorch 2019-08-07 11:07:22 +02:00
Jiri BOROVEC 50cca25d6f add missing req. 2019-08-06 22:45:27 +02:00
Jiri BOROVEC 469941a528 pkg relative imports 
* split requirements.txt
* pytest verbose
 2019-08-05 10:52:09 +02:00
William Falcon caf874538c added init to test folder 2019-07-24 22:00:00 -04:00
William Falcon 204a81a10e added init to test folder 2019-07-24 21:50:27 -04:00
William Falcon 2ddf51bf3e added init to test folder 2019-07-24 21:44:46 -04:00
William Falcon 2ca0166a0d removed deps 2019-07-24 21:19:26 -04:00
William Falcon 39ed4472c2 removed dep 2019-07-24 21:13:00 -04:00
William Falcon 135b826ebb removed dep 2019-07-24 20:56:43 -04:00
William Falcon 24c07bdff3 removed dep 2019-07-24 20:56:09 -04:00
William Falcon 3ebf3bbcfd removed dep 2019-07-24 20:55:16 -04:00
William Falcon afb5d0e638 removed dep 2019-07-24 20:52:53 -04:00
William Falcon 81cd8037db updated reqs 2019-07-24 09:06:26 -04:00
William Falcon 56b6fedf18
Update requirements.txt 2019-06-29 18:41:05 -04:00
William Falcon e7d7004d92
Update requirements.txt 2019-06-29 18:40:25 -04:00
William Falcon 0a03042bf7 fixed multiprocessing import 2019-06-29 17:33:10 -04:00
William Falcon 8dfb8f9167 initial commit 2019-03-30 20:50:32 -04:00