8cd75a4dd5
fix comparing versions ( #6434 )
...
* fix comparing versions
* chlog
* .
* ...
* datasets
2021-03-23 07:51:45 +00:00
1fae10a2dc
refactoring setup ( #6590 )
...
* refactoring setup
* .
* docs
* flake8
2021-03-22 08:39:19 -04:00
efd272a3ca
Pass {fit,validate,test,predict} to setup() and teardown() ( #6386 )
2021-03-08 15:27:07 +01:00
bcc0004955
Add before_batch_transfer and after_batch_transfer hooks ( #3671 )
...
* add hooks
* comment
* docs
* add tests
* make it private
* fix tests
* docs
* chlog
* testcode
* codefactor
* fix doctest
* fix doctest
* suggestions
* is always overriden
* pep and BoringModel
* BoringModel
* docs
* docs
* docs
* fix
* rebase
* rebase
* suggestions
* docs
* suggestions
* try fix docs
* docs
* update name
* yapf
* docs
* rebase
* yapf
2021-02-18 06:58:12 -05:00
77be6f6e24
resolve conflits
...
resolve doc
boring commit
docs
torchvision
tpu
Update dockers/tpu-tests/tpu_test_cases.jsonnet
Update dockers/tpu-tests/tpu_test_cases.jsonnet
2021-02-05 21:43:10 +01:00
6d7c01b1b4
[docs] Add docs for non-SLURM cluster setup ( #5754 )
...
* Add docs for non-slurm cluster setup
* Apply suggestions from code review
Co-authored-by: Adrian Wälchli <aedu.waelchli@gmail.com>
* Update docs/source/cluster.rst
Co-authored-by: Jirka Borovec <Borda@users.noreply.github.com>
* Update docs/source/cluster.rst
Co-authored-by: Alexander <alexander@reshytko.com>
Co-authored-by: chaton <thomas@grid.ai>
Co-authored-by: Jirka Borovec <Borda@users.noreply.github.com>
Co-authored-by: Adrian Wälchli <aedu.waelchli@gmail.com>
Co-authored-by: mergify[bot] <37929162+mergify[bot]@users.noreply.github.com>
Co-authored-by: Rohit Gupta <rohitgr1998@gmail.com>
2021-02-05 21:43:10 +01:00
b2b27e4018
Fix docs typo ( #4930 )
...
* Fix docs
* typo
* import
* Apply suggestions from code review
Co-authored-by: Jirka Borovec <Borda@users.noreply.github.com>
Co-authored-by: chaton <thomas@grid.ai>
Co-authored-by: Jirka Borovec <jirka.borovec@seznam.cz>
Co-authored-by: edenlightning <66261195+edenlightning@users.noreply.github.com>
Co-authored-by: mergify[bot] <37929162+mergify[bot]@users.noreply.github.com>
2021-02-05 21:40:40 +01:00
d5c107fa96
Docs: move images ( #5756 )
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* move images
* logo
2021-02-03 15:08:19 +00:00
99ea2a3b35
define Yapf config ( #5591 )
...
* define YAPF
* add check
* add check
* add temp ignore
* apply yapf
* ex
2021-01-27 21:58:33 -05:00
dee5553b2b
move to Pages dir ( #4869 )
...
* folders
* common / advanced / extensions
* paths
* flake8
* isort
Co-authored-by: mergify[bot] <37929162+mergify[bot]@users.noreply.github.com>
2021-01-26 15:07:07 -05:00
f782230412
docs cleaning - testcode ( #5595 )
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* testcode - python
* revert
* simple
* testcode @rst
* pl
* fix
* pip
* update
* conf
* conf
* nn.
* typo
2021-01-26 04:44:54 -05:00
0c9960bfbb
Docs: upgrade packages ( #5600 )
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* upgrade docs packages
* cmd
* -cmd
2021-01-24 11:15:52 -05:00
bb366232e7
Add non-existing resume_from_checkpoint acceptance for auto-resubmit ( #4402 )
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* Add empty resume_from_checkpoint acceptance #4366
* Fix general error catch with focused file check
* Add fsspec HTTP extras
Add fsspec's HTTPFileSystem support through http extras.
pl has supported remote http file (e.g. #2925 ),
so this commit do not add new functionality.
* Fix potential too much logging in DDP
* Add PR changelog
* Add well-written argument explanation
Co-authored-by: Adrian Wälchli <aedu.waelchli@gmail.com>
* Fix DDP-compatible restore logging
Notify from where the states are restored.
This feature temporally deleted as a result of PR review.
With succeeding review, added with DDP compatibility.
* Fix utility import pathes
* Refactor load step commentaries
* Refactor hpc ckpt suffix acquisition
* Refactor restore/hpc_load match
* Refactor hpc load trial
* Refactor checkpoint dir check
* Refactor unneeded function nest
* Refactor nested If
* Refactor duplicated cache clear
* Refactor attempt flow with if/elif
* Fix pip8
* Refactor hook commentary
Co-authored-by: chaton <thomas@grid.ai>
* Fix pep8
* Refactor hpc load checkpoint path acquisition
* Fix pip8
* Fix typo
Co-authored-by: Adrian Wälchli <aedu.waelchli@gmail.com>
* Fix typo
Co-authored-by: Adrian Wälchli <aedu.waelchli@gmail.com>
* Fix doc
Co-authored-by: Adrian Wälchli <aedu.waelchli@gmail.com>
* Refactor None Union type with Optional
* Fix build-doc CI failure debuged in #5329
* Fix fsspec import during build-doc #5329
* Fix test epoch
Co-authored-by: Adrian Wälchli <aedu.waelchli@gmail.com>
* Fix test with latest test models
* .
Co-authored-by: Adrian Wälchli <aedu.waelchli@gmail.com>
Co-authored-by: chaton <thomas@grid.ai>
Co-authored-by: Jirka Borovec <Borda@users.noreply.github.com>
Co-authored-by: Sean Naren <sean.narenthiran@gmail.com>
Co-authored-by: Roger Shieh <sh.rog@protonmail.ch>
(cherry picked from commit b0051e8c03
2021-01-06 12:55:38 +01:00
0f36525e8f
fix/enable - check F401 ( #5201 )
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* refactor - check F401
* missed
* fix
2020-12-21 10:15:04 +01:00
059eaecbb4
set xxx_AVAILABLE as protected ( #5082 )
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* sett xxx_AVAILABLE as protected
* docs
2020-12-14 20:19:05 +05:30
12cb9942a1
Tpu save ( #4309 )
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* convert xla tensor to cpu before save
* move_to_cpu
* updated CHANGELOG.md
* added on_save to accelerators
* if accelerator is not None
* refactors
* change filename to run test
* run test_tpu_backend
* added xla_device_utils to tests
* added xla_device_utils to test
* removed tests
* Revert "added xla_device_utils to test"
This reverts commit 0c9316bb
* fixed pep
* increase timeout and print traceback
* lazy check tpu exists
* increased timeout
removed barrier for tpu during test
reduced epochs
* fixed torch_xla imports
* fix tests
* define xla utils
* fix test
* aval
* chlog
* docs
* aval
* Apply suggestions from code review
Co-authored-by: Jirka Borovec <jirka.borovec@seznam.cz>
Co-authored-by: Jirka Borovec <Borda@users.noreply.github.com>
Co-authored-by: chaton <thomas@grid.ai>
Co-authored-by: Sean Naren <sean.narenthiran@gmail.com>
2020-12-02 13:05:11 +00:00
217650320e
simplify imports Omegaconf ( #4873 )
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* hydra
* omegaconf
2020-11-27 01:00:56 +01:00
442d57f1e9
simplify imports xla / TPU ( #4872 )
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* xla
* tpu
* fix
* fix
* flake8
2020-11-27 00:37:48 +01:00
11e73ceaa6
fix import and typo in AMP ( #4871 )
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* fix import and typo
* docs
* apex
* fix
* typo
2020-11-26 23:45:52 +01:00
9a5d40aff4
test PL examples ( #4551 )
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* test PL examples
* minor formatting
* skip failing
* skip failing
* args
* mnist datamodule
* refactor tests
* refactor tests
* skip
* skip
* drop DM
* drop DM
Co-authored-by: Sean Naren <sean.narenthiran@gmail.com>
2020-11-17 19:35:17 +01:00
2d78d9b84a
CI: Added isort import check for the code on pull-request ( #4242 )
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* added isort CI job and updated isort config
* changed CI check output from files to full diff
* added isort pre-commit hook
* Added missing first party and restricted files affected by isort
* Applied isort to root-level, docs and benchmarks
* Apply suggestions from code review
Co-authored-by: Nathan Painchaud <nathanpainchaud@gmail.com>
Co-authored-by: Jirka Borovec <Borda@users.noreply.github.com>
Co-authored-by: chaton <thomas@grid.ai>
2020-11-13 22:57:46 +01:00
abf1d4b992
fix mock pkgs in docs ( #4591 )
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* fix mock pkgs in docs
* sphinx
* CI
Co-authored-by: chaton <thomas@grid.ai>
2020-11-10 14:57:21 +01:00
207ff728c9
Add favicon path ( #4331 )
2020-10-24 16:32:06 +05:30
d3567c33a6
move base req. to root ( #4219 )
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* move base req. to root
* check-manifest
* check-manifest
* manifest
* req
2020-10-18 20:40:18 +02:00
9be26d0c1b
Use `viewcode` extension instead of `linkcode` ( #3503 )
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* use viewcode instead of linkcode
* use viewcode instead of linkcode
* Apply suggestions from code review
Co-authored-by: William Falcon <waf2107@columbia.edu>
* Apply suggestions from code review
Co-authored-by: Jirka Borovec <Borda@users.noreply.github.com>
Co-authored-by: William Falcon <waf2107@columbia.edu>
2020-10-07 23:55:24 +02:00
fef9b7777f
missing logs [to be merged before release][skip ci] ( #3131 )
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* missing logs
* chlog
* add chlo to docs
* Apply suggestions from code review
Co-authored-by: Adrian Wälchli <aedu.waelchli@gmail.com>
* chlog
* docs
* log
* metrics
* logs
* log
* format
Co-authored-by: Adrian Wälchli <aedu.waelchli@gmail.com>
2020-10-07 14:51:35 -04:00
fe5b943965
Callback docs with autosummary ( #3908 )
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* callback docs with autosummary
* do not show private methods
* callback base docstring
2020-10-06 17:28:45 -04:00
3ff5327e83
Mocking loggers (part 1, wandb) ( #3596 )
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* mocking for wandb
* remove wandb import in amp test
* mock loggers in sphinx
* check tests
* Update extra.txt
* setup
* dev
* min
* revert
Co-authored-by: Jirka Borovec <Borda@users.noreply.github.com>
Co-authored-by: Jirka Borovec <jirka@pytorchlightning.ai>
2020-09-25 16:00:02 +02:00
6685b49db3
add lightning colab tutorial notebooks ( #3591 )
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* ⚡ add lightning colab tutorial notebooks
* Update notebooks/01-mnist-hello-world.ipynb
* Update notebooks/03-basic-gan.ipynb
* Update notebooks/04-transformers-text-classification.ipynb
* Update notebooks/02-datamodules.ipynb
* add jupytext
* 🐛 comment ipynb related things in conf.py
* 🔥 remove .py files
Co-authored-by: Jirka Borovec <jirka@pytorchlightning.ai>
2020-09-21 19:31:59 -06:00
a81ca4d1c1
drop nb sphinx ( #3452 )
2020-09-10 19:51:09 -04:00
ee4eae884b
[docs] Add copy and toggle buttons to sphinx ( #3054 )
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* Support sphinx toggle and copy buttons
* add buttons to conf
2020-08-19 18:59:45 -04:00
f8c058215f
simplify tests & cleaning ( #2588 )
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* simplify
* tmpdir
* revert
* clean
* accel
* types
* test
* edit test acc
Co-authored-by: Adrian Wälchli <aedu.waelchli@gmail.com>
* Update test acc
Co-authored-by: Adrian Wälchli <aedu.waelchli@gmail.com>
2020-08-07 23:22:05 +02:00
949734489a
remove deprecated in v0.9 ( #2760 )
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* remove deprecated in v0.9
* data_loader
* import
* hook
* args
2020-07-30 23:19:28 +02:00
4dbd761a1c
refactor 3/n ( #2709 )
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* reactor into gpu accelerator
* reactor into gpu accelerator
* reactor into gpu accelerator
* reactor into gpu accelerator
* reactor into gpu accelerator
* reactor into gpu accelerator
* reactor into gpu accelerator
* reactor into gpu accelerator
* reactor into gpu accelerator
* reactor into gpu accelerator
* reactor into gpu accelerator
* reactor into gpu accelerator
* reactor into gpu accelerator
* reactor into gpu accelerator
* reactor into gpu accelerator
* reactor into gpu accelerator
* reactor into gpu accelerator
* reactor into gpu accelerator
* reactor into gpu accelerator
* reactor into gpu accelerator
* reactor into gpu accelerator
2020-07-25 20:56:50 -04:00
071e09fe38
refactor 1/n for v1.0.0 ( #2704 )
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* reactor into gpu accelerator
* reactor into gpu accelerator
* reactor into gpu accelerator
* reactor into gpu accelerator
* reactor into gpu accelerator
* reactor into gpu accelerator
* reactor into gpu accelerator
* reactor into gpu accelerator
* reactor into gpu accelerator
* reactor into gpu accelerator
* reactor into gpu accelerator
* reactor into gpu accelerator
2020-07-25 14:38:51 -04:00
325852c6df
enabled no returns from eval ( #2446 )
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* enabled no returns from eval
* fixed docs
* fixed docs
* fixed docs
* fixed docs
* fixed docs
* fixed docs
* fixed docs
* fixed docs
* fixed docs
* fixed docs
* fixed docs
* fixed docs
2020-07-01 07:38:00 -04:00
d910cc5200
docs: dont mock imports when running sphinx doctest ( #2396 )
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* skip if no amp
* dont mock when doctesting
* install extra
2020-06-27 23:31:06 -04:00
a5cc4e8a2a
hide doctest decoration ( #2194 )
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* hide doctest decoration
* Update docs/source/conf.py
* Update docs/source/_static/copybutton.js
Co-authored-by: Adrian Wälchli <aedu.waelchli@gmail.com>
2020-06-15 17:02:21 -04:00
bfaabd7b7f
clean requirements ( #2128 )
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* clean requirements
* missing
* missing
* req
* min
* default >> base
* base.txt
2020-06-13 10:15:22 -04:00
2674976f2c
remove deprecated API for v0.8 ( #2073 )
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* remove deprecated API
* chlog
* times
* missed
* formatting check
* missing
* missing
* miss
* fix docs build error
* fix pep whitespace error
* docs
* wip
* amp_level
* amp_level
Co-authored-by: Adrian Wälchli <aedu.waelchli@gmail.com>
2020-06-12 14:37:52 -04:00
bd49b07fbb
Rework of Sklearn Metrics ( #1327 )
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* Create utils.py
* Create __init__.py
* redo sklearn metrics
* add some more metrics
* add sklearn metrics
* Create __init__.py
* redo sklearn metrics
* New metric classes (#1326 )
* Create metrics package
* Create metric.py
* Create utils.py
* Create __init__.py
* add tests for metric utils
* add docstrings for metrics utils
* add function to recursively apply other function to collection
* add tests for this function
* update test
* Update pytorch_lightning/metrics/metric.py
Co-Authored-By: Jirka Borovec <Borda@users.noreply.github.com>
* update metric name
* remove example docs
* fix tests
* add metric tests
* fix to tensor conversion
* fix apply to collection
* Update CHANGELOG.md
* Update pytorch_lightning/metrics/metric.py
Co-Authored-By: Jirka Borovec <Borda@users.noreply.github.com>
* remove tests from init
* add missing type annotations
* rename utils to convertors
* Create metrics.rst
* Update index.rst
* Update index.rst
* Update pytorch_lightning/metrics/convertors.py
Co-Authored-By: Jirka Borovec <Borda@users.noreply.github.com>
* Update pytorch_lightning/metrics/convertors.py
Co-Authored-By: Jirka Borovec <Borda@users.noreply.github.com>
* add doctest example
* rename file and fix imports
* added parametrized test
* replace lambda with inlined function
* rename apply_to_collection to apply_func
* Separated class description from init args
* Apply suggestions from code review
Co-Authored-By: Jirka Borovec <Borda@users.noreply.github.com>
* adjust random values
* suppress output when seeding
* remove gpu from doctest
* Add requested changes and add ellipsis for doctest
* forgot to push these files...
* add explicit check for dtype to convert to
* fix ddp tests
* remove explicit ddp destruction
Co-authored-by: Jirka Borovec <Borda@users.noreply.github.com>
* add sklearn metrics
* start adding sklearn tests
* fix typo
* return x and y only for curves
* fix typo
* add missing tests for sklearn funcs
* imports
* __all__
* imports
* fix sklearn arguments
* fix imports
* update requirements
* Update CHANGELOG.md
* Update test_sklearn_metrics.py
* formatting
* formatting
* format
* fix all warnings and formatting problems
* Update environment.yml
* Update requirements-extra.txt
* Update environment.yml
* Update requirements-extra.txt
* fix all warnings and formatting problems
* Update CHANGELOG.md
* docs
* inherit
* docs inherit.
* docs
* Apply suggestions from code review
Co-authored-by: Nicki Skafte <skaftenicki@gmail.com>
* docs
* req
* min
* Apply suggestions from code review
Co-authored-by: Tullie Murrell <tulliemurrell@gmail.com>
Co-authored-by: Jirka Borovec <Borda@users.noreply.github.com>
Co-authored-by: Jirka <jirka@pytorchlightning.ai>
Co-authored-by: Adrian Wälchli <aedu.waelchli@gmail.com>
Co-authored-by: Nicki Skafte <skaftenicki@gmail.com>
Co-authored-by: Tullie Murrell <tulliemurrell@gmail.com>
2020-06-10 15:43:12 +02:00
8ee6d91d0e
code guideline ( #1949 )
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* code rule
* Apply suggestions from code review
Co-authored-by: Jeremy Jordan <13970565+jeremyjordan@users.noreply.github.com>
* chlog
Co-authored-by: Jeremy Jordan <13970565+jeremyjordan@users.noreply.github.com>
Co-authored-by: Nicki Skafte <skaftenicki@gmail.com>
2020-05-28 14:40:49 +00:00
1c10560531
Fix failing docs ( #1821 )
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* missing pkg
* update CI
* strict RTD
* strict RTD
* make
* missing
* ignore
* ignore
* mock
* typo
2020-05-14 08:25:06 -04:00
0cb58fbb4c
Mock packages for RTD docs build (follow up to doctests) ( #1739 )
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* mock all packages on RTD
* update
2020-05-05 16:48:45 -04:00
a6de1b8d75
doctest for .rst files ( #1511 )
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* add doctest to circleci
* Revert "add doctest to circleci"
This reverts commit c45b34ea911a81f87989f6c3a832b1e8d8c471c6.
* Revert "Revert "add doctest to circleci""
This reverts commit 41fca97fdcfe1cf4f6bdb3bbba75d25fa3b11f70.
* doctest docs rst files
* Revert "doctest docs rst files"
This reverts commit b4a2e83e3da5ed1909de500ec14b6b614527c07f.
* doctest only rst
* doctest debugging.rst
* doctest apex
* doctest callbacks
* doctest early stopping
* doctest for child modules
* doctest experiment reporting
* indentation
* doctest fast training
* doctest for hyperparams
* doctests for lr_finder
* doctests multi-gpu
* more doctest
* make doctest drone
* fix label build error
* update fast training
* update invalid imports
* fix problem with int device count
* rebase stuff
* wip
* wip
* wip
* intro guide
* add missing code block
* circleci
* logger import for doctest
* test if doctest runs on drone
* fix mnist download
* also run install deps for building docs
* install cmake
* try sudo
* hide output
* try pip stuff
* try to mock horovod
* Tranfer -> Transfer
* add torchvision to extras
* revert pip stuff
* mlflow file location
* do not mock torch
* torchvision
* drone extra req.
* try higher sphinx version
* Revert "try higher sphinx version"
This reverts commit 490ac28e46d6fd52352640dfdf0d765befa56988.
* try coverage command
* try coverage command
* try undoc flag
* newline
* undo drone
* report coverage
* review
Co-authored-by: Jirka Borovec <Borda@users.noreply.github.com>
* remove torchvision from extras
* skip tests only if torchvision not available
* fix testoutput torchvision
Co-authored-by: Jirka Borovec <Borda@users.noreply.github.com>
2020-05-04 22:16:54 -04:00
48e808c20e
Move generated RST files to subfolder ( #1555 )
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* move generated files to subfolder
* remove if exists
* reformat argv
Co-Authored-By: Jirka Borovec <Borda@users.noreply.github.com>
* update rebase
* rebase yml
Co-authored-by: Jirka Borovec <Borda@users.noreply.github.com>
Co-authored-by: J. Borovec <jirka.borovec@seznam.cz>
2020-05-04 16:53:06 -04:00
29c7d2f195
Revert namespace package search to normal package search ( #1545 )
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* Revert this
* typos
* version++
Co-authored-by: J. Borovec <jirka.borovec@seznam.cz>
2020-04-21 08:26:47 -04:00
bd168819f2
fix changelog ( #1452 )
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* fix changelog
* formatting
* add ddp_cpu
* docs
* add another
2020-04-20 17:36:26 -04:00
6e1d72d98a
Improved docs for Loggers ( #1484 )
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* improve __init__
* improve logger base
* improve comet logger docs
* improved docs for mlflow
* improved nepune logger docs
* fix matplotlib import issue
* improve tensorboard docs
* improve docs for test tube
* improved trains logger docs
* improve wandb logger docs
* improved docs in experiment_logging.rst
* added MLflow to the list of loggers
* fix too long lines
* fix trains doctest
* fix neptune doctest
* fix mlflow doctest
* Apply suggestions from code review
Co-Authored-By: Jirka Borovec <Borda@users.noreply.github.com>
* Apply suggestions from code review
* fix whitespace
* try bypass mode for neptune (fix doctest api key error)
* try "test" as api key
* Revert "try "test" as api key"
This reverts commit fd77db26d551f08b4b4a12bb93cbd8f7a0814f29.
* try test as api key
* update neptune docs
* bump neptune minimal version
* revert unnecessary bypass code
* test if CI runs doctests in .rst files
* Revert "test if CI runs doctests in .rst files"
This reverts commit a45aeb460a8c4b7445a35dd7b49265f48d11c485.
* add doctest directive
* neptune demo links
* added tutorial link for W&B
* fix line too long
* fix merge error
* fix merge error
* add instructions how to install loggers
* add instructions how to install the loggers
* hide _abc_impl property from docs
* review Borda, 4 spaces
* indentation in example sections
* blank
Co-authored-by: Jirka Borovec <Borda@users.noreply.github.com>
2020-04-16 12:04:12 -04:00
5f6be4dd53
Pin sphinx version (fix for current docs build errors) ( #1382 )
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* Update requirements.txt
* Update docs/requirements.txt
Co-Authored-By: Jirka Borovec <Borda@users.noreply.github.com>
* freeze sphinx version
* Update docs/source/conf.py
Co-Authored-By: Adrian Wälchli <aedu.waelchli@gmail.com>
Co-authored-by: Jirka Borovec <Borda@users.noreply.github.com>
Co-authored-by: J. Borovec <jirka.borovec@seznam.cz>
2020-04-06 06:42:33 +00:00
Jirka Borovec