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45 Commits

Author SHA1 Message Date
Jirka Borovec 217650320e
simplify imports Omegaconf (#4873) 
* hydra

* omegaconf
 2020-11-27 01:00:56 +01:00
Rohit Gupta 2d9d7e4daa
Add prefix argument in loggers (#4557) 
* Add prefix parameter in loggers

* chlog

* pep

* patch test

* remove args, access via self

* try fix the test

* try fix the test

* try fix the test

* prefix test

* fix assert has calls


fix assert call

Co-authored-by: Adrian Wälchli <aedu.waelchli@gmail.com>
 2020-11-22 06:38:58 +01:00
Jeff Yang baa8558cc0
logger docs and api docs (#3950) 
* logger and api docs

* remove gpu_usage_logger, lr_logger

* update docstring

* fix wandb example

* remove step result

* charts

* add some charts info

Co-authored-by: Teddy Koker <teddy.koker@gmail.com>
Co-authored-by: Nicki Skafte <skaftenicki@gmail.com>
 2020-11-13 20:35:54 +05:30
William Falcon 9dfb4d2e41
docs (#4081) 2020-10-11 13:16:36 -04:00
ananthsub 6c47535de8
Update tensorboard.py (#3920) 2020-10-06 20:34:15 -04:00
William Falcon b34c7add23
Fixes #3668, #3887 as a bonus (#3888) 
* Fixes #3668, #3887 as a bonus

* Fixes #3668, #3887 as a bonus
 2020-10-05 21:30:41 -04:00
Brendan Fahy b14c4d4c70
handle fsspec inconsistency in PyArrowHDFS (#3805) 2020-10-02 22:35:42 -04:00
Nathan Raw 698f90164c
remove torch<1.3.0 warning from tb logger (#3784) 2020-10-02 15:36:55 +02:00
Sasikanth Kotti 8014d455b7
PR for Issue#3114 (#3741) 
Co-authored-by: Sasikanth <sasikanth@Sasikanths-MacBook-Pro.local>
 2020-09-30 08:36:27 -04:00
Rohit Gupta 07b857769a
Allow kwargs in Wandb & Neptune + kwargs docstring (#3475) 
* Allow kwargs in WandbLogger

* isort

* kwargs docstring

* typo

* kwargs for other loggers

* pep and isort

* formatting

* fix failing test

Co-authored-by: Adrian Wälchli <aedu.waelchli@gmail.com>
 2020-09-19 18:51:43 +02:00
Brendan Fahy 2d8c1b7c54
use fsspec instead of gfile for all IO (#3320) 
* use fsspec instead of gfile for all IO

This better supports remote (and local) file operations with a dedicated package

* Apply suggestions from code review

Co-authored-by: Justus Schock <12886177+justusschock@users.noreply.github.com>

* chlog

Co-authored-by: Jirka Borovec <Borda@users.noreply.github.com>
Co-authored-by: Justus Schock <12886177+justusschock@users.noreply.github.com>
Co-authored-by: Jirka Borovec <jirka@pytorchlightning.ai>
 2020-09-03 14:19:20 +02:00
James Bockman 79375e6d0a
Bug Fix: Remote Logging with Tensorboard (#3236) 
* Changed standard open to cloud_open

* Changed how version numbers are extracted to remove terminal / from paths

* formatting

Co-authored-by: James Bockman <james@aiml.team>
Co-authored-by: Jirka Borovec <Borda@users.noreply.github.com>
 2020-08-28 07:01:35 -04:00
s-rog 7b054399c6
fix tb hparams logging (#2974) 
* log_hyperparams add default metric

also adds scalar support

* fix typos and style

* another typo

* keep original logging implementation

* remove missed line

* fix capitalization

* add step to leg_metrics for tests

* disable hp metric none (-1) logging

to pass tests

* initial arg implementation

* add step to log_metrics

* add hp_metric case to log test

* add docs 

and minor formatting

* fix broken else

* pep8 style

* edit tests

* Update pytorch_lightning/loggers/tensorboard.py

Co-authored-by: Rohit Gupta <rohitgr1998@gmail.com>

* Update pytorch_lightning/loggers/tensorboard.py

Co-authored-by: Rohit Gupta <rohitgr1998@gmail.com>

Co-authored-by: Rohit Gupta <rohitgr1998@gmail.com>
 2020-08-24 06:57:04 +00:00
Rohit Gupta 34c88d127b
Fix log_graph in TensorBoardLogger (#3092) 2020-08-22 06:35:09 -04:00
William Falcon f43028f3ae
added copyright notices (#3062) 2020-08-19 22:03:22 -04:00
Nicki Skafte cefc7f7c32
Feature/log computational graph (#3003) 
* add methods

* log in trainer

* add tests

* changelog

* fix tests

* fix tests

* fix tests

* fix tests

* fix tests

* fix tests

* fix tests

* text

* added argument

* update tests

* fix styling

* improve testing
 2020-08-19 19:08:46 -04:00
Brendan Fahy 6e77181ec7
Squashed commit of the following: (#2164) 
commit 29fb0506cd38a15c359e369cc8bc4435916b0c78
Author: Brendan Fahy <bmfahy@gmail.com>
Date:   Sat Aug 8 19:35:30 2020 +0000

    fix checking for version for docs to build

commit 467fd640db02275972c7111af031c86bb59333e9
Author: Brendan Fahy <bmfahy@gmail.com>
Date:   Sat Aug 8 18:56:05 2020 +0000

    remove no local test

commit a7cc9f88de00feec1a5406874d05313c42bd004c
Author: Brendan Fahy <bmfahy@gmail.com>
Date:   Sat Aug 8 18:46:44 2020 +0000

    fix

commit 3fdbb729da79ae9348c83410a138666bad467951
Author: Brendan Fahy <bmfahy@gmail.com>
Date:   Sat Aug 8 18:23:30 2020 +0000

    revert requirements

commit 9b8686bd83e2bc243cf329e26f1c667c6949cf67
Author: Brendan Fahy <bmfahy@gmail.com>
Date:   Sat Aug 8 18:16:42 2020 +0000

    make it a fixture

commit eec74953d24c8b25268d3b6dde3cc4affdd5cb8f
Author: Brendan Fahy <bmfahy@gmail.com>
Date:   Sat Aug 8 18:01:32 2020 +0000

    fix up the testing

commit 896d94a0e60083d52c81db2a036b7f1e015cad11
Author: Brendan Fahy <bmfahy@gmail.com>
Date:   Sat Aug 8 17:47:28 2020 +0000

    fix some tests

commit 6d22bde19767bf2b71dfd44839b01efdf6888f83
Merge: 6175d4e2 6ebe0d72
Author: Brendan Fahy <bmfahy@gmail.com>
Date:   Sat Aug 8 10:20:47 2020 +0000

    Merge remote-tracking branch 'origin/master' into tb_use_gfile

commit 6175d4e26b15a43c412c26d501762cd0b570616a
Author: Brendan Fahy <bmfahy@gmail.com>
Date:   Fri Aug 7 10:16:36 2020 +0000

    Use tensorboard.compat.gfile to support remote writing
 2020-08-09 06:08:44 -04:00
ananthsub b39f4798a6
Add support to Tensorboard logger for OmegaConf hparams (#2846) 
* Add support to Tensorboard logger for OmegaConf hparams

Address https://github.com/PyTorchLightning/pytorch-lightning/issues/2844

We check if we can import omegaconf, and if the hparams are omegaconf instances. if so, we use OmegaConf.merge to preserve the typing, such that saving hparams to yaml actually triggers the OmegaConf branch

* avalaible

* chlog

* test

Co-authored-by: Jirka Borovec <jirka@pytorchlightning.ai>
 2020-08-07 09:13:21 -04:00
Adrian Wälchli f16b4cfc52
save_dir fix for MLflowLogger + save_dir tests for others (#2502) 
* mlflow rework

* logger save_dir

* folder

* mlflow

* simplify

* fix test

* add a test for file dir contents

* new line

* changelog

* docs

* Update CHANGELOG.md

Co-authored-by: Jirka Borovec <Borda@users.noreply.github.com>

* test for comet logger

* improve mlflow checkpoint test

* prevent  commet logger error on pytest exit

* test tensorboard save dir structure

* wandb save dir test

* skip test on windows

* add mlflow to pickle tests

* wandb

* code factor

* remove unused imports

* remove unused setter

* wandb mock

* wip mock

* wip mock

* wandb tests with mocking

* clean up

* clean up

* comments

* include wandblogger in test

* clean up

* missing argument

Co-authored-by: Jirka Borovec <Borda@users.noreply.github.com>
 2020-07-09 07:15:41 -04:00
William Falcon 11069c8784
Fix ddp tests + .test() (#2512) 
* added base tests for tpu

* added base tests for tpu

* added base tests for tpu

* added base tests for tpu

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* added base tests for tpu

* added base tests for tpu

* fix deprecation warnings

* added base tests for tpu

* added base tests for tpu

* Update pytorch_lightning/trainer/trainer.py

Co-authored-by: Jeremy Jordan <13970565+jeremyjordan@users.noreply.github.com>

* added base tests for tpu

* added base tests for tpu

* added base tests for tpu

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* added base tests for tpu

* added base tests for tpu

* added base tests for tpu

* added base tests for tpu

Co-authored-by: Jirka <jirka@pytorchlightning.ai>
Co-authored-by: Jeremy Jordan <13970565+jeremyjordan@users.noreply.github.com>
 2020-07-07 12:24:56 -04:00
Adrian Wälchli 1098a0d725
make loggers pickleable (#2518) 
* state updates to logger

* change log

* changelog
 2020-07-05 19:57:22 -04:00
Adrian Wälchli 145670f893
fix logging on rank 0 only (#2425) 
* fix and test for ddp block logging rank > 0

* rename

* use the dummy logger

* dummy logger test

* set the logger in  model

* decorator for rank zero experiment

* simplify check

* simplify

* fix problem with None in checkpoint path

* revert configure logger

* unused import

* offline

* try rank 0 decorator in checkpoint

* try fix test

* imgs

* add asserts to make sure log zero only saves checkpoints

* add asserts to make sure log zero only saves checkpoints

* add asserts to make sure log zero only saves checkpoints

* add asserts to make sure log zero only saves checkpoints

* add asserts to make sure log zero only saves checkpoints

* fix tpu tests

* fix tpu tests

Co-authored-by: William Falcon <waf2107@columbia.edu>
 2020-06-30 18:09:16 -04:00
Jirka Borovec e289e45120
test: save hparams to yaml (#2198) 
* save hparams to yaml

* import

* resolves

* req

* Update requirements/base.txt

Co-authored-by: Omry Yadan <omry@fb.com>

Co-authored-by: Omry Yadan <omry@fb.com>
 2020-06-16 06:34:55 -04:00
Jirka Borovec c0903b800d
past checkpoints (#2160) 
* past checkpoints

* omegaConf save

* enforce type

* resolve=True

Co-authored-by: Omry Yadan <omry@fb.com>

* test omegaconf

* tests

* test past

Co-authored-by: Omry Yadan <omry@fb.com>
 2020-06-14 11:36:45 -04:00
Tullie Murrell 6537642f6a
Remove explicit flush from tensorboard logger (#2126) 
* Remove explicit flush from tensorboard logger

* Update changelog
 2020-06-09 07:08:12 -04:00
So Uchida 22d7d03118
Replace meta_tags.csv with hparams.yaml (#1271) 
* Add support for hierarchical dict

* Support nested Namespace

* Add docstring

* Migrate hparam flattening to each logger

* Modify URLs in CHANGELOG

* typo

* Simplify the conditional branch about Namespace

Co-Authored-By: Jirka Borovec <Borda@users.noreply.github.com>

* Update CHANGELOG.md

Co-Authored-By: Jirka Borovec <Borda@users.noreply.github.com>

* added examples section to docstring

* renamed _dict -> input_dict

* mata_tags.csv -> hparams.yaml

* code style fixes

* add pyyaml

* remove unused import

* create the member NAME_HPARAMS_FILE

* improve tests

* Update tensorboard.py

* pass the local test w/o relavents of Horovod

* formatting

* update dependencies

* fix dependencies

* Apply suggestions from code review

* add savings

* warn

* docstrings

* tests

* Apply suggestions from code review

* saving

* Apply suggestions from code review

* use default

* remove logging

* typo fixes

* update docs

* update CHANGELOG

* clean imports

* add blank lines

* Update pytorch_lightning/core/lightning.py

Co-authored-by: Adrian Wälchli <aedu.waelchli@gmail.com>

* Update pytorch_lightning/core/lightning.py

Co-authored-by: Adrian Wälchli <aedu.waelchli@gmail.com>

* back to namespace

* add docs

* test fix

* update dependencies

* add space

Co-authored-by: Jirka Borovec <Borda@users.noreply.github.com>
Co-authored-by: Adrian Wälchli <aedu.waelchli@gmail.com>
 2020-05-13 15:05:15 +02:00
Justus Schock 5f292390fd
Bug fix hparam logging with metrics (#1647) 
* add metric logging

* Use pytorch built-in method

* Update tensorboard.py

* Update tensorboard.py
 2020-05-12 07:25:12 -04:00
Justus Schock cdbf2f4a37
Update tensorboard.py 2020-04-27 09:47:35 +02:00
Justus Schock e309b55b38
Update tensorboard.py 2020-04-27 09:44:26 +02:00
Jirka Borovec 58a467dd68
model checkpint on rank_zero_only & global rank state (#1408) 
* try delete in async or DDP us0-ecase

* changelog

* add model chekpoint rank

* simple delete

* flake8

* use global rank

* chnagelog

* fix review

* fix import

* proposal

* proposal

* proposal

* improve proposal (fix problems with method call self)

* cleaning

Co-authored-by: Adrian Wälchli <adrian.waelchli@students.unibe.ch>
Co-authored-by: William Falcon <waf2107@columbia.edu>
 2020-04-24 17:21:00 -04:00
Adrian Wälchli 6e1d72d98a
Improved docs for Loggers (#1484) 
* improve __init__

* improve logger base

* improve comet logger docs

* improved docs for mlflow

* improved nepune logger docs

* fix matplotlib import issue

* improve tensorboard docs

* improve docs for test tube

* improved trains logger docs

* improve wandb logger docs

* improved docs in experiment_logging.rst

* added MLflow to the list of loggers

* fix too long lines

* fix trains doctest

* fix neptune doctest

* fix mlflow doctest

* Apply suggestions from code review

Co-Authored-By: Jirka Borovec <Borda@users.noreply.github.com>

* Apply suggestions from code review

* fix whitespace

* try bypass mode for neptune (fix doctest api key error)

* try "test" as api key

* Revert "try "test" as api key"

This reverts commit fd77db26d551f08b4b4a12bb93cbd8f7a0814f29.

* try test as api key

* update neptune docs

* bump neptune minimal version

* revert unnecessary bypass code

* test if CI runs doctests in .rst files

* Revert "test if CI runs doctests in .rst files"

This reverts commit a45aeb460a8c4b7445a35dd7b49265f48d11c485.

* add doctest directive

* neptune demo links

* added tutorial link for W&B

* fix line too long

* fix merge error

* fix merge error

* add instructions how to install loggers

* add instructions how to install the loggers

* hide _abc_impl property from docs

* review Borda, 4 spaces

* indentation in example sections

* blank

Co-authored-by: Jirka Borovec <Borda@users.noreply.github.com>
 2020-04-16 12:04:12 -04:00
Jirka Borovec b3fe17ddeb
fix flushing loggers (#1459) 
* flushing loggers

* flushing loggers

* flushing loggers

* flushing loggers

* changelog

* typo

* fix trains

* optimize imports

* add logger test all

* add logger test pickle

* flake8

* fix benchmark

* hanging loggers

* try

* del

* all

* cleaning
 2020-04-14 20:32:33 -04:00
areshytko 495ffbd028
Tensorboard logger check if lightning_logs directory exists (#1377) 
* tensorboard logger version if root_dir not exist

* update changelog

* resolve comments

Co-authored-by: Alexander Reshytko <areshytko@Alexanders-MacBook-Pro.local>
Co-authored-by: William Falcon <waf2107@columbia.edu>
 2020-04-07 06:39:54 -04:00
Adrian Wälchli 792962ecc9
CI: Force docs warnings to be raised as errors (+ fix all) (#1191) 
* add argument to force warn

* fix automodule error

* fix permalink error

* fix indentation warning

* fix warning

* fix import warnings

* fix duplicate label warning

* fix bullet point indentation warning

* fix duplicate label warning

* fix "import not top level" warning

* line too long

* fix indentation

* fix bullet points indentation warning

* fix hooks warnings

* fix reference problem with excluded test_tube

* fix indentation in print

* change imports for trains logger

* remove pandas type annotation

* Update pytorch_lightning/core/lightning.py

* include bullet points inside note

* remove old quick start guide (unused)

* fix unused warning

* fix formatting

* fix duplicate label issue

* fix duplicate label warning (replaced by class ref)

* fix tick

* fix indentation warnings

* docstring ticks

* remove obsolete docstring typing

* Revert "remove old quick start guide (unused)"

This reverts commit d51bb40695.

* added old quick start guide to navigation

* remove unused  tutorials file

* ignore some modules that got deprecated and are not used anymore

* fix duplicate label warning

* move examples doc and exclude pl_examples from autodoc

* fix formatting for configure_optimizer

* fix no blank line warnings

* fix "see also" labels and add paramref extension

* fix more reference problems

* fix multi-gpu reference

* fix weird warning

* fix indentation and unrecognized characters in code block

* fix warning "... not included in toctree"

* fix PIL import error

* fix duplicate target "here" warning

* fix broken link

* revert accidentally moved pl_examples

* changelog

* stdout

* note some things to know

Co-Authored-By: Jirka Borovec <Borda@users.noreply.github.com>
Co-authored-by: J. Borovec <jirka.borovec@seznam.cz>
Co-authored-by: Jirka Borovec <Borda@users.noreply.github.com>
 2020-03-20 20:49:01 +01:00
So Uchida 01b8991c5a
Support hierarchical dict (#1152) 
* Add support for hierarchical dict

* Support nested Namespace

* Add docstring

* Migrate hparam flattening to each logger

* Modify URLs in CHANGELOG

* typo

* Simplify the conditional branch about Namespace

Co-Authored-By: Jirka Borovec <Borda@users.noreply.github.com>

* Update CHANGELOG.md

Co-Authored-By: Jirka Borovec <Borda@users.noreply.github.com>

* added examples section to docstring

* renamed _dict -> input_dict

Co-authored-by: Jirka Borovec <Borda@users.noreply.github.com>
 2020-03-19 09:15:47 -04:00
Jirka Borovec 22a7264e9a
improve partial Codecov (#1172) 
* ignore in setup

* show report

* abs imports

* abstract pass

* cover loggers

* doctest trains

* locals

* pass

* revert tensorboard

* use tensorboardX

* revert tensorboardX

* fix trains

* Add TrainsLogger.set_credentials (#1179)

* Add TrainsLogger.set_credentials to control trains server configuration and authentication from code. Sync trains package version.
Fix CI Trains tests

* Add global TrainsLogger set_bypass_mode (#1187)

* Add global TrainsLogger set_bypass_mode skips all external communication

Co-authored-by: bmartinn <>

* rm some no-cov

Co-authored-by: Martin.B <51887611+bmartinn@users.noreply.github.com>
 2020-03-19 09:14:29 -04:00
monney da61398835
Add Support for Non-primitive types in TensorboardLogger (#1130) 
* Added support for non-primitive types to tensorboard logger

* added EOF newline

* PEP8

* Updated CHANGELOG for PR #1130. Moved _sanitize_params to base logger. Cleaned up _sanitize_params

* Updated CHANGELOG for PR #1130. Moved _sanitize_params to base logger. Cleaned up _sanitize_params

* changed convert_params to static method

* PEP8

* Cleanup Doctest for _sanitize_params

Co-Authored-By: Jirka Borovec <Borda@users.noreply.github.com>

* Removed OrderedDict import

* Updated import order to conventions

Co-authored-by: Manbir Gulati <manbirgulati@Manbirs-MBP.hsd1.md.comcast.net>
Co-authored-by: Jirka Borovec <Borda@users.noreply.github.com>
 2020-03-14 13:02:05 -04:00
Jirka Borovec e586ed4767
hparams as dict [blocked by 1041] (#1029) 
* hparams as dict

* hparams as dict

* fixing

* fixing

* fixing

* fixing

* typing

* typing

* chnagelog

* update set hparams

* use setter

* simplify

* chnagelog

* imports

* pylint

* typing

* Update training_io.py

* Update training_io.py

* Update lightning.py

* Update test_trainer.py

* Update __init__.py

* Update base.py

* Update utils.py

* Update test_trainer.py

* Update training_io.py

* Update test_trainer.py

* Update test_trainer.py

* Update test_trainer.py

* Update test_trainer.py

* Update callback_config.py

* Update callback_config.py

* Update test_trainer.py

Co-authored-by: William Falcon <waf2107@columbia.edu>
 2020-03-04 09:33:39 -05:00
Ethan Harris f862d9f691
Logger tests and fixes (#1009) 
* Refactor logger tests

* Update and add tests for wandb logger

* Update and add tests for logger bases

* Update and add tests for mlflow logger

* Improve coverage

* Updates

* Update CHANGELOG

* Updates

* Fix style

* Fix style

* Updates
 2020-03-02 20:49:14 -05:00
Ethan Harris a5f159b2c7
Add support for multiple loggers (#903) 
* Add support for multiple loggers

* Fix PEP

* Cleanup

* Cleanup

* Add typing to loggers

* Update base.py

* Replace duck typing with isinstance check

* Update CHANGELOG.md

* Update comet experiment type, Switch to abstractmethod in logging.py

* Fix test

* Add passes to LightningLoggerBase

* Update experiment_logging.rst
 2020-02-25 14:52:39 -05:00
William Falcon 4c6c3d04ce
Docs (#813) 
* added outline of all features

* updated common use cases doc

* updated common use cases doc

* updated common use cases doc

* updated common use cases doc

* updated common use cases doc

* updated common use cases doc

* updated common use cases doc

* updated common use cases doc

* updated common use cases doc

* updated common use cases doc

* updated common use cases doc

* updated common use cases doc

* updated common use cases doc

* updated docs
 2020-02-10 23:55:22 -05:00
Bob Kemp 8fa802e35b
Tensorboard path generalisation (#804) 
* Allow experiment versions to be overridden by passing a string value.
Allow experiment names to be empty, in which case no per-experiment subdirectory will be created and checkpoints will be saved in the directory given by the save_dir parameter.

* Document tensorboard api changes

* Review comment fixes plus fixed test failure for minimum requirements build

* More format fixes from review
 2020-02-10 09:07:17 -05:00
Dmitry Lipin b5cab7e0f5
Create single file in TensorBoardLogger (#777) 
* write to single file

* fix import
 2020-02-02 09:31:45 -05:00
Adrian Wälchli 472f394788
Resolve some codefactor issues (#756) 
* remove unnecessary pass statements

* use isinstance for type checks

* remove unnecessary else/elif after return

* remove unnecessary return statements

* move doc string to top

* merge isinstance calls

* remove unnecessary else/elif after raise

* use list comprehension

* do not use len without comparison

* add missing shebang

* revert isinstance check back to type

broke tests, because bool is actually subclass of int

* add missing period to doc string

* remove unnecessary pass statements

* use isinstance for type checks

* remove unnecessary else/elif after return

* remove unnecessary return statements

* move doc string to top

* merge isinstance calls

* remove unnecessary else/elif after raise

* use list comprehension

* do not use len without comparison

* add missing shebang

* revert isinstance check back to type

broke tests, because bool is actually subclass of int

* add missing period to doc string

* Fix default ckpt path when logger exists (#771)

* rename logging -> loggers (#767)

* move logging >> loggers

* add warning

* fix tests

* logging alias

* formatting

* formatting

* use isinstance for type checks

* revert isinstance check back to type

broke tests, because bool is actually subclass of int

* add more detail to tbptt example (#755)

* add more detail to tbptt example

* warn user about new arg in training_step

Co-authored-by: Vadim Bereznyuk <kuynzereb@gmail.com>
Co-authored-by: Jirka Borovec <Borda@users.noreply.github.com>
Co-authored-by: Jeremy Jordan <13970565+jeremyjordan@users.noreply.github.com>
 2020-02-01 18:44:05 -05:00
Jirka Borovec 76a1c67d87
rename logging -> loggers (#767) 
* move logging >> loggers

* add warning

* fix tests

* logging alias

* formatting

* formatting
 2020-02-01 15:47:58 -05:00