lightning/pytorch_lightning/metrics/metric.py

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New metric classes (#1326) (#1877) * New metric classes (#1326) * Create metrics package * Create metric.py * Create utils.py * Create __init__.py * add tests for metric utils * add docstrings for metrics utils * add function to recursively apply other function to collection * add tests for this function * update test * Update pytorch_lightning/metrics/metric.py Co-Authored-By: Jirka Borovec <Borda@users.noreply.github.com> * update metric name * remove example docs * fix tests * add metric tests * fix to tensor conversion * fix apply to collection * Update CHANGELOG.md * Update pytorch_lightning/metrics/metric.py Co-Authored-By: Jirka Borovec <Borda@users.noreply.github.com> * remove tests from init * add missing type annotations * rename utils to convertors * Create metrics.rst * Update index.rst * Update index.rst * Update pytorch_lightning/metrics/convertors.py Co-Authored-By: Jirka Borovec <Borda@users.noreply.github.com> * Update pytorch_lightning/metrics/convertors.py Co-Authored-By: Jirka Borovec <Borda@users.noreply.github.com> * Update pytorch_lightning/metrics/convertors.py Co-Authored-By: Jirka Borovec <Borda@users.noreply.github.com> * Update pytorch_lightning/metrics/metric.py Co-Authored-By: Jirka Borovec <Borda@users.noreply.github.com> * Update tests/utilities/test_apply_to_collection.py Co-Authored-By: Jirka Borovec <Borda@users.noreply.github.com> * Update tests/utilities/test_apply_to_collection.py Co-Authored-By: Jirka Borovec <Borda@users.noreply.github.com> * Update tests/metrics/convertors.py Co-Authored-By: Jirka Borovec <Borda@users.noreply.github.com> * Apply suggestions from code review Co-Authored-By: Jirka Borovec <Borda@users.noreply.github.com> * add doctest example * rename file and fix imports * added parametrized test * replace lambda with inlined function * rename apply_to_collection to apply_func * Separated class description from init args * Apply suggestions from code review Co-Authored-By: Jirka Borovec <Borda@users.noreply.github.com> * adjust random values * suppress output when seeding * remove gpu from doctest * Add requested changes and add ellipsis for doctest * forgot to push these files... * add explicit check for dtype to convert to * fix ddp tests * remove explicit ddp destruction Co-authored-by: Jirka Borovec <Borda@users.noreply.github.com> * move dtype device mixin to more general place * refactor to general device dtype mixin * add initial metric package description * change default to none for mac os * pep8 * fix import * Update index.rst * Update ci-testing.yml * Apply suggestions from code review Co-authored-by: Adrian Wälchli <aedu.waelchli@gmail.com> * Update CHANGELOG.md * Update pytorch_lightning/metrics/converters.py * readme * Update metric.py * Update pytorch_lightning/metrics/converters.py Co-authored-by: Jirka Borovec <Borda@users.noreply.github.com> Co-authored-by: William Falcon <waf2107@columbia.edu> Co-authored-by: Adrian Wälchli <aedu.waelchli@gmail.com> Co-authored-by: Jirka <jirka@pytorchlightning.ai>
2020-05-19 15:05:07 +00:00
from abc import ABC, abstractmethod
Rework of Sklearn Metrics (#1327) * Create utils.py * Create __init__.py * redo sklearn metrics * add some more metrics * add sklearn metrics * Create __init__.py * redo sklearn metrics * New metric classes (#1326) * Create metrics package * Create metric.py * Create utils.py * Create __init__.py * add tests for metric utils * add docstrings for metrics utils * add function to recursively apply other function to collection * add tests for this function * update test * Update pytorch_lightning/metrics/metric.py Co-Authored-By: Jirka Borovec <Borda@users.noreply.github.com> * update metric name * remove example docs * fix tests * add metric tests * fix to tensor conversion * fix apply to collection * Update CHANGELOG.md * Update pytorch_lightning/metrics/metric.py Co-Authored-By: Jirka Borovec <Borda@users.noreply.github.com> * remove tests from init * add missing type annotations * rename utils to convertors * Create metrics.rst * Update index.rst * Update index.rst * Update pytorch_lightning/metrics/convertors.py Co-Authored-By: Jirka Borovec <Borda@users.noreply.github.com> * Update pytorch_lightning/metrics/convertors.py Co-Authored-By: Jirka Borovec <Borda@users.noreply.github.com> * add doctest example * rename file and fix imports * added parametrized test * replace lambda with inlined function * rename apply_to_collection to apply_func * Separated class description from init args * Apply suggestions from code review Co-Authored-By: Jirka Borovec <Borda@users.noreply.github.com> * adjust random values * suppress output when seeding * remove gpu from doctest * Add requested changes and add ellipsis for doctest * forgot to push these files... * add explicit check for dtype to convert to * fix ddp tests * remove explicit ddp destruction Co-authored-by: Jirka Borovec <Borda@users.noreply.github.com> * add sklearn metrics * start adding sklearn tests * fix typo * return x and y only for curves * fix typo * add missing tests for sklearn funcs * imports * __all__ * imports * fix sklearn arguments * fix imports * update requirements * Update CHANGELOG.md * Update test_sklearn_metrics.py * formatting * formatting * format * fix all warnings and formatting problems * Update environment.yml * Update requirements-extra.txt * Update environment.yml * Update requirements-extra.txt * fix all warnings and formatting problems * Update CHANGELOG.md * docs * inherit * docs inherit. * docs * Apply suggestions from code review Co-authored-by: Nicki Skafte <skaftenicki@gmail.com> * docs * req * min * Apply suggestions from code review Co-authored-by: Tullie Murrell <tulliemurrell@gmail.com> Co-authored-by: Jirka Borovec <Borda@users.noreply.github.com> Co-authored-by: Jirka <jirka@pytorchlightning.ai> Co-authored-by: Adrian Wälchli <aedu.waelchli@gmail.com> Co-authored-by: Nicki Skafte <skaftenicki@gmail.com> Co-authored-by: Tullie Murrell <tulliemurrell@gmail.com>
2020-06-10 13:43:12 +00:00
from typing import Any, Optional
New metric classes (#1326) (#1877) * New metric classes (#1326) * Create metrics package * Create metric.py * Create utils.py * Create __init__.py * add tests for metric utils * add docstrings for metrics utils * add function to recursively apply other function to collection * add tests for this function * update test * Update pytorch_lightning/metrics/metric.py Co-Authored-By: Jirka Borovec <Borda@users.noreply.github.com> * update metric name * remove example docs * fix tests * add metric tests * fix to tensor conversion * fix apply to collection * Update CHANGELOG.md * Update pytorch_lightning/metrics/metric.py Co-Authored-By: Jirka Borovec <Borda@users.noreply.github.com> * remove tests from init * add missing type annotations * rename utils to convertors * Create metrics.rst * Update index.rst * Update index.rst * Update pytorch_lightning/metrics/convertors.py Co-Authored-By: Jirka Borovec <Borda@users.noreply.github.com> * Update pytorch_lightning/metrics/convertors.py Co-Authored-By: Jirka Borovec <Borda@users.noreply.github.com> * Update pytorch_lightning/metrics/convertors.py Co-Authored-By: Jirka Borovec <Borda@users.noreply.github.com> * Update pytorch_lightning/metrics/metric.py Co-Authored-By: Jirka Borovec <Borda@users.noreply.github.com> * Update tests/utilities/test_apply_to_collection.py Co-Authored-By: Jirka Borovec <Borda@users.noreply.github.com> * Update tests/utilities/test_apply_to_collection.py Co-Authored-By: Jirka Borovec <Borda@users.noreply.github.com> * Update tests/metrics/convertors.py Co-Authored-By: Jirka Borovec <Borda@users.noreply.github.com> * Apply suggestions from code review Co-Authored-By: Jirka Borovec <Borda@users.noreply.github.com> * add doctest example * rename file and fix imports * added parametrized test * replace lambda with inlined function * rename apply_to_collection to apply_func * Separated class description from init args * Apply suggestions from code review Co-Authored-By: Jirka Borovec <Borda@users.noreply.github.com> * adjust random values * suppress output when seeding * remove gpu from doctest * Add requested changes and add ellipsis for doctest * forgot to push these files... * add explicit check for dtype to convert to * fix ddp tests * remove explicit ddp destruction Co-authored-by: Jirka Borovec <Borda@users.noreply.github.com> * move dtype device mixin to more general place * refactor to general device dtype mixin * add initial metric package description * change default to none for mac os * pep8 * fix import * Update index.rst * Update ci-testing.yml * Apply suggestions from code review Co-authored-by: Adrian Wälchli <aedu.waelchli@gmail.com> * Update CHANGELOG.md * Update pytorch_lightning/metrics/converters.py * readme * Update metric.py * Update pytorch_lightning/metrics/converters.py Co-authored-by: Jirka Borovec <Borda@users.noreply.github.com> Co-authored-by: William Falcon <waf2107@columbia.edu> Co-authored-by: Adrian Wälchli <aedu.waelchli@gmail.com> Co-authored-by: Jirka <jirka@pytorchlightning.ai>
2020-05-19 15:05:07 +00:00
import torch
import torch.distributed
Native torch metrics (#1488) * Create metric.py * Create utils.py * Create __init__.py * Create __init__.py * Create __init__.py * add tests for metric utils * add tests for metric utils * add docstrings for metrics utils * add docstrings for metrics utils * add function to recursively apply other function to collection * add function to recursively apply other function to collection * add tests for this function * add tests for this function * add tests for this function * update test * update test * Update pytorch_lightning/metrics/metric.py Co-Authored-By: Jirka Borovec <Borda@users.noreply.github.com> * update metric name * remove example docs * fix tests * fix tests * add metric tests * fix to tensor conversion * fix to tensor conversion * fix apply to collection * fix apply to collection * Update pytorch_lightning/metrics/metric.py Co-Authored-By: Jirka Borovec <Borda@users.noreply.github.com> * remove tests from init * remove tests from init * add missing type annotations * rename utils to convertors * rename utils to convertors * rename utils to convertors * rename utils to convertors * Update pytorch_lightning/metrics/convertors.py Co-Authored-By: Jirka Borovec <Borda@users.noreply.github.com> * Update pytorch_lightning/metrics/convertors.py Co-Authored-By: Jirka Borovec <Borda@users.noreply.github.com> * Update pytorch_lightning/metrics/convertors.py Co-Authored-By: Jirka Borovec <Borda@users.noreply.github.com> * Update pytorch_lightning/metrics/convertors.py Co-Authored-By: Jirka Borovec <Borda@users.noreply.github.com> * Update pytorch_lightning/metrics/convertors.py Co-Authored-By: Jirka Borovec <Borda@users.noreply.github.com> * Update pytorch_lightning/metrics/convertors.py Co-Authored-By: Jirka Borovec <Borda@users.noreply.github.com> * Update pytorch_lightning/metrics/metric.py Co-Authored-By: Jirka Borovec <Borda@users.noreply.github.com> * Update tests/utilities/test_apply_to_collection.py Co-Authored-By: Jirka Borovec <Borda@users.noreply.github.com> * Update tests/utilities/test_apply_to_collection.py Co-Authored-By: Jirka Borovec <Borda@users.noreply.github.com> * Update tests/utilities/test_apply_to_collection.py Co-Authored-By: Jirka Borovec <Borda@users.noreply.github.com> * Update tests/utilities/test_apply_to_collection.py Co-Authored-By: Jirka Borovec <Borda@users.noreply.github.com> * Update tests/metrics/convertors.py Co-Authored-By: Jirka Borovec <Borda@users.noreply.github.com> * Update tests/metrics/convertors.py Co-Authored-By: Jirka Borovec <Borda@users.noreply.github.com> * Apply suggestions from code review Co-Authored-By: Jirka Borovec <Borda@users.noreply.github.com> * Apply suggestions from code review Co-Authored-By: Jirka Borovec <Borda@users.noreply.github.com> * Apply suggestions from code review Co-Authored-By: Jirka Borovec <Borda@users.noreply.github.com> * add doctest example * rename file and fix imports * rename file and fix imports * added parametrized test * added parametrized test * replace lambda with inlined function * rename apply_to_collection to apply_func * rename apply_to_collection to apply_func * rename apply_to_collection to apply_func * Separated class description from init args * Apply suggestions from code review Co-Authored-By: Jirka Borovec <Borda@users.noreply.github.com> * adjust random values * suppress output when seeding * remove gpu from doctest * Add requested changes and add ellipsis for doctest * Add requested changes and add ellipsis for doctest * Add requested changes and add ellipsis for doctest * forgot to push these files... * forgot to push these files... * forgot to push these files... * add explicit check for dtype to convert to * add explicit check for dtype to convert to * fix ddp tests * fix ddp tests * fix ddp tests * remove explicit ddp destruction * remove explicit ddp destruction * New metric classes (#1326) * Create metrics package * Create metric.py * Create utils.py * Create __init__.py * add tests for metric utils * add docstrings for metrics utils * add function to recursively apply other function to collection * add tests for this function * update test * Update pytorch_lightning/metrics/metric.py Co-Authored-By: Jirka Borovec <Borda@users.noreply.github.com> * update metric name * remove example docs * fix tests * add metric tests * fix to tensor conversion * fix apply to collection * Update CHANGELOG.md * Update pytorch_lightning/metrics/metric.py Co-Authored-By: Jirka Borovec <Borda@users.noreply.github.com> * remove tests from init * add missing type annotations * rename utils to convertors * Create metrics.rst * Update index.rst * Update index.rst * Update pytorch_lightning/metrics/convertors.py Co-Authored-By: Jirka Borovec <Borda@users.noreply.github.com> * Update pytorch_lightning/metrics/convertors.py Co-Authored-By: Jirka Borovec <Borda@users.noreply.github.com> * Update pytorch_lightning/metrics/convertors.py Co-Authored-By: Jirka Borovec <Borda@users.noreply.github.com> * Update pytorch_lightning/metrics/metric.py Co-Authored-By: Jirka Borovec <Borda@users.noreply.github.com> * Update tests/utilities/test_apply_to_collection.py Co-Authored-By: Jirka Borovec <Borda@users.noreply.github.com> * Update tests/utilities/test_apply_to_collection.py Co-Authored-By: Jirka Borovec <Borda@users.noreply.github.com> * Update tests/metrics/convertors.py Co-Authored-By: Jirka Borovec <Borda@users.noreply.github.com> * Apply suggestions from code review Co-Authored-By: Jirka Borovec <Borda@users.noreply.github.com> * add doctest example * rename file and fix imports * added parametrized test * replace lambda with inlined function * rename apply_to_collection to apply_func * Separated class description from init args * Apply suggestions from code review Co-Authored-By: Jirka Borovec <Borda@users.noreply.github.com> * adjust random values * suppress output when seeding * remove gpu from doctest * Add requested changes and add ellipsis for doctest * forgot to push these files... * add explicit check for dtype to convert to * fix ddp tests * remove explicit ddp destruction Co-authored-by: Jirka Borovec <Borda@users.noreply.github.com> * add function to reduce tensors (similar to reduction in torch.nn) * add functionals of reduction metrics * add functionals of reduction metrics * add more metrics * pep8 fixes * rename * rename * add reduction tests * add first classification tests * bugfixes * bugfixes * add more unit tests * fix roc score metric * fix tests * solve tests * fix docs * Update CHANGELOG.md * remove binaries * solve changes from rebase * add eos * test auc independently * fix formatting * docs * docs * chlog * move * function descriptions * Add documentation to native metrics (#2144) * add docs * add docs * Apply suggestions from code review * formatting * add docs Co-authored-by: Jirka Borovec <Borda@users.noreply.github.com> Co-authored-by: Jirka <jirka@pytorchlightning.ai> * Rename tests/metrics/test_classification.py to tests/metrics/functional/test_classification.py * Rename tests/metrics/test_reduction.py to tests/metrics/functional/test_reduction.py * Add module interface for classification metrics * add basic tests for classification metrics' module interface * pep8 * add additional converters * add additional base class * change baseclass for some metrics * update classification tests * update converter tests * update metric tests * Apply suggestions from code review * tests-params * tests-params * imports * pep8 * tests-params * formatting * fix test_metrics * typo * formatting * fix dice tests * fix decorator order * fix tests * seed * dice test * formatting * try freeze test * formatting * fix tests * try spawn * formatting * fix Co-authored-by: Jirka Borovec <Borda@users.noreply.github.com> Co-authored-by: J. Borovec <jirka.borovec@seznam.cz> Co-authored-by: Xavier Sumba <c.uent@hotmail.com> Co-authored-by: Jirka <jirka@pytorchlightning.ai> Co-authored-by: Nicki Skafte <nugginea@gmail.com>
2020-06-13 12:47:25 +00:00
from pytorch_lightning.metrics.converters import (
tensor_metric, numpy_metric, tensor_collection_metric)
New metric classes (#1326) (#1877) * New metric classes (#1326) * Create metrics package * Create metric.py * Create utils.py * Create __init__.py * add tests for metric utils * add docstrings for metrics utils * add function to recursively apply other function to collection * add tests for this function * update test * Update pytorch_lightning/metrics/metric.py Co-Authored-By: Jirka Borovec <Borda@users.noreply.github.com> * update metric name * remove example docs * fix tests * add metric tests * fix to tensor conversion * fix apply to collection * Update CHANGELOG.md * Update pytorch_lightning/metrics/metric.py Co-Authored-By: Jirka Borovec <Borda@users.noreply.github.com> * remove tests from init * add missing type annotations * rename utils to convertors * Create metrics.rst * Update index.rst * Update index.rst * Update pytorch_lightning/metrics/convertors.py Co-Authored-By: Jirka Borovec <Borda@users.noreply.github.com> * Update pytorch_lightning/metrics/convertors.py Co-Authored-By: Jirka Borovec <Borda@users.noreply.github.com> * Update pytorch_lightning/metrics/convertors.py Co-Authored-By: Jirka Borovec <Borda@users.noreply.github.com> * Update pytorch_lightning/metrics/metric.py Co-Authored-By: Jirka Borovec <Borda@users.noreply.github.com> * Update tests/utilities/test_apply_to_collection.py Co-Authored-By: Jirka Borovec <Borda@users.noreply.github.com> * Update tests/utilities/test_apply_to_collection.py Co-Authored-By: Jirka Borovec <Borda@users.noreply.github.com> * Update tests/metrics/convertors.py Co-Authored-By: Jirka Borovec <Borda@users.noreply.github.com> * Apply suggestions from code review Co-Authored-By: Jirka Borovec <Borda@users.noreply.github.com> * add doctest example * rename file and fix imports * added parametrized test * replace lambda with inlined function * rename apply_to_collection to apply_func * Separated class description from init args * Apply suggestions from code review Co-Authored-By: Jirka Borovec <Borda@users.noreply.github.com> * adjust random values * suppress output when seeding * remove gpu from doctest * Add requested changes and add ellipsis for doctest * forgot to push these files... * add explicit check for dtype to convert to * fix ddp tests * remove explicit ddp destruction Co-authored-by: Jirka Borovec <Borda@users.noreply.github.com> * move dtype device mixin to more general place * refactor to general device dtype mixin * add initial metric package description * change default to none for mac os * pep8 * fix import * Update index.rst * Update ci-testing.yml * Apply suggestions from code review Co-authored-by: Adrian Wälchli <aedu.waelchli@gmail.com> * Update CHANGELOG.md * Update pytorch_lightning/metrics/converters.py * readme * Update metric.py * Update pytorch_lightning/metrics/converters.py Co-authored-by: Jirka Borovec <Borda@users.noreply.github.com> Co-authored-by: William Falcon <waf2107@columbia.edu> Co-authored-by: Adrian Wälchli <aedu.waelchli@gmail.com> Co-authored-by: Jirka <jirka@pytorchlightning.ai>
2020-05-19 15:05:07 +00:00
from pytorch_lightning.utilities.apply_func import apply_to_collection
from pytorch_lightning.utilities.device_dtype_mixin import DeviceDtypeModuleMixin
Native torch metrics (#1488) * Create metric.py * Create utils.py * Create __init__.py * Create __init__.py * Create __init__.py * add tests for metric utils * add tests for metric utils * add docstrings for metrics utils * add docstrings for metrics utils * add function to recursively apply other function to collection * add function to recursively apply other function to collection * add tests for this function * add tests for this function * add tests for this function * update test * update test * Update pytorch_lightning/metrics/metric.py Co-Authored-By: Jirka Borovec <Borda@users.noreply.github.com> * update metric name * remove example docs * fix tests * fix tests * add metric tests * fix to tensor conversion * fix to tensor conversion * fix apply to collection * fix apply to collection * Update pytorch_lightning/metrics/metric.py Co-Authored-By: Jirka Borovec <Borda@users.noreply.github.com> * remove tests from init * remove tests from init * add missing type annotations * rename utils to convertors * rename utils to convertors * rename utils to convertors * rename utils to convertors * Update pytorch_lightning/metrics/convertors.py Co-Authored-By: Jirka Borovec <Borda@users.noreply.github.com> * Update pytorch_lightning/metrics/convertors.py Co-Authored-By: Jirka Borovec <Borda@users.noreply.github.com> * Update pytorch_lightning/metrics/convertors.py Co-Authored-By: Jirka Borovec <Borda@users.noreply.github.com> * Update pytorch_lightning/metrics/convertors.py Co-Authored-By: Jirka Borovec <Borda@users.noreply.github.com> * Update pytorch_lightning/metrics/convertors.py Co-Authored-By: Jirka Borovec <Borda@users.noreply.github.com> * Update pytorch_lightning/metrics/convertors.py Co-Authored-By: Jirka Borovec <Borda@users.noreply.github.com> * Update pytorch_lightning/metrics/metric.py Co-Authored-By: Jirka Borovec <Borda@users.noreply.github.com> * Update tests/utilities/test_apply_to_collection.py Co-Authored-By: Jirka Borovec <Borda@users.noreply.github.com> * Update tests/utilities/test_apply_to_collection.py Co-Authored-By: Jirka Borovec <Borda@users.noreply.github.com> * Update tests/utilities/test_apply_to_collection.py Co-Authored-By: Jirka Borovec <Borda@users.noreply.github.com> * Update tests/utilities/test_apply_to_collection.py Co-Authored-By: Jirka Borovec <Borda@users.noreply.github.com> * Update tests/metrics/convertors.py Co-Authored-By: Jirka Borovec <Borda@users.noreply.github.com> * Update tests/metrics/convertors.py Co-Authored-By: Jirka Borovec <Borda@users.noreply.github.com> * Apply suggestions from code review Co-Authored-By: Jirka Borovec <Borda@users.noreply.github.com> * Apply suggestions from code review Co-Authored-By: Jirka Borovec <Borda@users.noreply.github.com> * Apply suggestions from code review Co-Authored-By: Jirka Borovec <Borda@users.noreply.github.com> * add doctest example * rename file and fix imports * rename file and fix imports * added parametrized test * added parametrized test * replace lambda with inlined function * rename apply_to_collection to apply_func * rename apply_to_collection to apply_func * rename apply_to_collection to apply_func * Separated class description from init args * Apply suggestions from code review Co-Authored-By: Jirka Borovec <Borda@users.noreply.github.com> * adjust random values * suppress output when seeding * remove gpu from doctest * Add requested changes and add ellipsis for doctest * Add requested changes and add ellipsis for doctest * Add requested changes and add ellipsis for doctest * forgot to push these files... * forgot to push these files... * forgot to push these files... * add explicit check for dtype to convert to * add explicit check for dtype to convert to * fix ddp tests * fix ddp tests * fix ddp tests * remove explicit ddp destruction * remove explicit ddp destruction * New metric classes (#1326) * Create metrics package * Create metric.py * Create utils.py * Create __init__.py * add tests for metric utils * add docstrings for metrics utils * add function to recursively apply other function to collection * add tests for this function * update test * Update pytorch_lightning/metrics/metric.py Co-Authored-By: Jirka Borovec <Borda@users.noreply.github.com> * update metric name * remove example docs * fix tests * add metric tests * fix to tensor conversion * fix apply to collection * Update CHANGELOG.md * Update pytorch_lightning/metrics/metric.py Co-Authored-By: Jirka Borovec <Borda@users.noreply.github.com> * remove tests from init * add missing type annotations * rename utils to convertors * Create metrics.rst * Update index.rst * Update index.rst * Update pytorch_lightning/metrics/convertors.py Co-Authored-By: Jirka Borovec <Borda@users.noreply.github.com> * Update pytorch_lightning/metrics/convertors.py Co-Authored-By: Jirka Borovec <Borda@users.noreply.github.com> * Update pytorch_lightning/metrics/convertors.py Co-Authored-By: Jirka Borovec <Borda@users.noreply.github.com> * Update pytorch_lightning/metrics/metric.py Co-Authored-By: Jirka Borovec <Borda@users.noreply.github.com> * Update tests/utilities/test_apply_to_collection.py Co-Authored-By: Jirka Borovec <Borda@users.noreply.github.com> * Update tests/utilities/test_apply_to_collection.py Co-Authored-By: Jirka Borovec <Borda@users.noreply.github.com> * Update tests/metrics/convertors.py Co-Authored-By: Jirka Borovec <Borda@users.noreply.github.com> * Apply suggestions from code review Co-Authored-By: Jirka Borovec <Borda@users.noreply.github.com> * add doctest example * rename file and fix imports * added parametrized test * replace lambda with inlined function * rename apply_to_collection to apply_func * Separated class description from init args * Apply suggestions from code review Co-Authored-By: Jirka Borovec <Borda@users.noreply.github.com> * adjust random values * suppress output when seeding * remove gpu from doctest * Add requested changes and add ellipsis for doctest * forgot to push these files... * add explicit check for dtype to convert to * fix ddp tests * remove explicit ddp destruction Co-authored-by: Jirka Borovec <Borda@users.noreply.github.com> * add function to reduce tensors (similar to reduction in torch.nn) * add functionals of reduction metrics * add functionals of reduction metrics * add more metrics * pep8 fixes * rename * rename * add reduction tests * add first classification tests * bugfixes * bugfixes * add more unit tests * fix roc score metric * fix tests * solve tests * fix docs * Update CHANGELOG.md * remove binaries * solve changes from rebase * add eos * test auc independently * fix formatting * docs * docs * chlog * move * function descriptions * Add documentation to native metrics (#2144) * add docs * add docs * Apply suggestions from code review * formatting * add docs Co-authored-by: Jirka Borovec <Borda@users.noreply.github.com> Co-authored-by: Jirka <jirka@pytorchlightning.ai> * Rename tests/metrics/test_classification.py to tests/metrics/functional/test_classification.py * Rename tests/metrics/test_reduction.py to tests/metrics/functional/test_reduction.py * Add module interface for classification metrics * add basic tests for classification metrics' module interface * pep8 * add additional converters * add additional base class * change baseclass for some metrics * update classification tests * update converter tests * update metric tests * Apply suggestions from code review * tests-params * tests-params * imports * pep8 * tests-params * formatting * fix test_metrics * typo * formatting * fix dice tests * fix decorator order * fix tests * seed * dice test * formatting * try freeze test * formatting * fix tests * try spawn * formatting * fix Co-authored-by: Jirka Borovec <Borda@users.noreply.github.com> Co-authored-by: J. Borovec <jirka.borovec@seznam.cz> Co-authored-by: Xavier Sumba <c.uent@hotmail.com> Co-authored-by: Jirka <jirka@pytorchlightning.ai> Co-authored-by: Nicki Skafte <nugginea@gmail.com>
2020-06-13 12:47:25 +00:00
class Metric(DeviceDtypeModuleMixin, torch.nn.Module, ABC):
New metric classes (#1326) (#1877) * New metric classes (#1326) * Create metrics package * Create metric.py * Create utils.py * Create __init__.py * add tests for metric utils * add docstrings for metrics utils * add function to recursively apply other function to collection * add tests for this function * update test * Update pytorch_lightning/metrics/metric.py Co-Authored-By: Jirka Borovec <Borda@users.noreply.github.com> * update metric name * remove example docs * fix tests * add metric tests * fix to tensor conversion * fix apply to collection * Update CHANGELOG.md * Update pytorch_lightning/metrics/metric.py Co-Authored-By: Jirka Borovec <Borda@users.noreply.github.com> * remove tests from init * add missing type annotations * rename utils to convertors * Create metrics.rst * Update index.rst * Update index.rst * Update pytorch_lightning/metrics/convertors.py Co-Authored-By: Jirka Borovec <Borda@users.noreply.github.com> * Update pytorch_lightning/metrics/convertors.py Co-Authored-By: Jirka Borovec <Borda@users.noreply.github.com> * Update pytorch_lightning/metrics/convertors.py Co-Authored-By: Jirka Borovec <Borda@users.noreply.github.com> * Update pytorch_lightning/metrics/metric.py Co-Authored-By: Jirka Borovec <Borda@users.noreply.github.com> * Update tests/utilities/test_apply_to_collection.py Co-Authored-By: Jirka Borovec <Borda@users.noreply.github.com> * Update tests/utilities/test_apply_to_collection.py Co-Authored-By: Jirka Borovec <Borda@users.noreply.github.com> * Update tests/metrics/convertors.py Co-Authored-By: Jirka Borovec <Borda@users.noreply.github.com> * Apply suggestions from code review Co-Authored-By: Jirka Borovec <Borda@users.noreply.github.com> * add doctest example * rename file and fix imports * added parametrized test * replace lambda with inlined function * rename apply_to_collection to apply_func * Separated class description from init args * Apply suggestions from code review Co-Authored-By: Jirka Borovec <Borda@users.noreply.github.com> * adjust random values * suppress output when seeding * remove gpu from doctest * Add requested changes and add ellipsis for doctest * forgot to push these files... * add explicit check for dtype to convert to * fix ddp tests * remove explicit ddp destruction Co-authored-by: Jirka Borovec <Borda@users.noreply.github.com> * move dtype device mixin to more general place * refactor to general device dtype mixin * add initial metric package description * change default to none for mac os * pep8 * fix import * Update index.rst * Update ci-testing.yml * Apply suggestions from code review Co-authored-by: Adrian Wälchli <aedu.waelchli@gmail.com> * Update CHANGELOG.md * Update pytorch_lightning/metrics/converters.py * readme * Update metric.py * Update pytorch_lightning/metrics/converters.py Co-authored-by: Jirka Borovec <Borda@users.noreply.github.com> Co-authored-by: William Falcon <waf2107@columbia.edu> Co-authored-by: Adrian Wälchli <aedu.waelchli@gmail.com> Co-authored-by: Jirka <jirka@pytorchlightning.ai>
2020-05-19 15:05:07 +00:00
"""
Abstract base class for metric implementation.
Should be used to implement metrics that
1. Return multiple Outputs
2. Handle their own DDP sync
"""
Native torch metrics (#1488) * Create metric.py * Create utils.py * Create __init__.py * Create __init__.py * Create __init__.py * add tests for metric utils * add tests for metric utils * add docstrings for metrics utils * add docstrings for metrics utils * add function to recursively apply other function to collection * add function to recursively apply other function to collection * add tests for this function * add tests for this function * add tests for this function * update test * update test * Update pytorch_lightning/metrics/metric.py Co-Authored-By: Jirka Borovec <Borda@users.noreply.github.com> * update metric name * remove example docs * fix tests * fix tests * add metric tests * fix to tensor conversion * fix to tensor conversion * fix apply to collection * fix apply to collection * Update pytorch_lightning/metrics/metric.py Co-Authored-By: Jirka Borovec <Borda@users.noreply.github.com> * remove tests from init * remove tests from init * add missing type annotations * rename utils to convertors * rename utils to convertors * rename utils to convertors * rename utils to convertors * Update pytorch_lightning/metrics/convertors.py Co-Authored-By: Jirka Borovec <Borda@users.noreply.github.com> * Update pytorch_lightning/metrics/convertors.py Co-Authored-By: Jirka Borovec <Borda@users.noreply.github.com> * Update pytorch_lightning/metrics/convertors.py Co-Authored-By: Jirka Borovec <Borda@users.noreply.github.com> * Update pytorch_lightning/metrics/convertors.py Co-Authored-By: Jirka Borovec <Borda@users.noreply.github.com> * Update pytorch_lightning/metrics/convertors.py Co-Authored-By: Jirka Borovec <Borda@users.noreply.github.com> * Update pytorch_lightning/metrics/convertors.py Co-Authored-By: Jirka Borovec <Borda@users.noreply.github.com> * Update pytorch_lightning/metrics/metric.py Co-Authored-By: Jirka Borovec <Borda@users.noreply.github.com> * Update tests/utilities/test_apply_to_collection.py Co-Authored-By: Jirka Borovec <Borda@users.noreply.github.com> * Update tests/utilities/test_apply_to_collection.py Co-Authored-By: Jirka Borovec <Borda@users.noreply.github.com> * Update tests/utilities/test_apply_to_collection.py Co-Authored-By: Jirka Borovec <Borda@users.noreply.github.com> * Update tests/utilities/test_apply_to_collection.py Co-Authored-By: Jirka Borovec <Borda@users.noreply.github.com> * Update tests/metrics/convertors.py Co-Authored-By: Jirka Borovec <Borda@users.noreply.github.com> * Update tests/metrics/convertors.py Co-Authored-By: Jirka Borovec <Borda@users.noreply.github.com> * Apply suggestions from code review Co-Authored-By: Jirka Borovec <Borda@users.noreply.github.com> * Apply suggestions from code review Co-Authored-By: Jirka Borovec <Borda@users.noreply.github.com> * Apply suggestions from code review Co-Authored-By: Jirka Borovec <Borda@users.noreply.github.com> * add doctest example * rename file and fix imports * rename file and fix imports * added parametrized test * added parametrized test * replace lambda with inlined function * rename apply_to_collection to apply_func * rename apply_to_collection to apply_func * rename apply_to_collection to apply_func * Separated class description from init args * Apply suggestions from code review Co-Authored-By: Jirka Borovec <Borda@users.noreply.github.com> * adjust random values * suppress output when seeding * remove gpu from doctest * Add requested changes and add ellipsis for doctest * Add requested changes and add ellipsis for doctest * Add requested changes and add ellipsis for doctest * forgot to push these files... * forgot to push these files... * forgot to push these files... * add explicit check for dtype to convert to * add explicit check for dtype to convert to * fix ddp tests * fix ddp tests * fix ddp tests * remove explicit ddp destruction * remove explicit ddp destruction * New metric classes (#1326) * Create metrics package * Create metric.py * Create utils.py * Create __init__.py * add tests for metric utils * add docstrings for metrics utils * add function to recursively apply other function to collection * add tests for this function * update test * Update pytorch_lightning/metrics/metric.py Co-Authored-By: Jirka Borovec <Borda@users.noreply.github.com> * update metric name * remove example docs * fix tests * add metric tests * fix to tensor conversion * fix apply to collection * Update CHANGELOG.md * Update pytorch_lightning/metrics/metric.py Co-Authored-By: Jirka Borovec <Borda@users.noreply.github.com> * remove tests from init * add missing type annotations * rename utils to convertors * Create metrics.rst * Update index.rst * Update index.rst * Update pytorch_lightning/metrics/convertors.py Co-Authored-By: Jirka Borovec <Borda@users.noreply.github.com> * Update pytorch_lightning/metrics/convertors.py Co-Authored-By: Jirka Borovec <Borda@users.noreply.github.com> * Update pytorch_lightning/metrics/convertors.py Co-Authored-By: Jirka Borovec <Borda@users.noreply.github.com> * Update pytorch_lightning/metrics/metric.py Co-Authored-By: Jirka Borovec <Borda@users.noreply.github.com> * Update tests/utilities/test_apply_to_collection.py Co-Authored-By: Jirka Borovec <Borda@users.noreply.github.com> * Update tests/utilities/test_apply_to_collection.py Co-Authored-By: Jirka Borovec <Borda@users.noreply.github.com> * Update tests/metrics/convertors.py Co-Authored-By: Jirka Borovec <Borda@users.noreply.github.com> * Apply suggestions from code review Co-Authored-By: Jirka Borovec <Borda@users.noreply.github.com> * add doctest example * rename file and fix imports * added parametrized test * replace lambda with inlined function * rename apply_to_collection to apply_func * Separated class description from init args * Apply suggestions from code review Co-Authored-By: Jirka Borovec <Borda@users.noreply.github.com> * adjust random values * suppress output when seeding * remove gpu from doctest * Add requested changes and add ellipsis for doctest * forgot to push these files... * add explicit check for dtype to convert to * fix ddp tests * remove explicit ddp destruction Co-authored-by: Jirka Borovec <Borda@users.noreply.github.com> * add function to reduce tensors (similar to reduction in torch.nn) * add functionals of reduction metrics * add functionals of reduction metrics * add more metrics * pep8 fixes * rename * rename * add reduction tests * add first classification tests * bugfixes * bugfixes * add more unit tests * fix roc score metric * fix tests * solve tests * fix docs * Update CHANGELOG.md * remove binaries * solve changes from rebase * add eos * test auc independently * fix formatting * docs * docs * chlog * move * function descriptions * Add documentation to native metrics (#2144) * add docs * add docs * Apply suggestions from code review * formatting * add docs Co-authored-by: Jirka Borovec <Borda@users.noreply.github.com> Co-authored-by: Jirka <jirka@pytorchlightning.ai> * Rename tests/metrics/test_classification.py to tests/metrics/functional/test_classification.py * Rename tests/metrics/test_reduction.py to tests/metrics/functional/test_reduction.py * Add module interface for classification metrics * add basic tests for classification metrics' module interface * pep8 * add additional converters * add additional base class * change baseclass for some metrics * update classification tests * update converter tests * update metric tests * Apply suggestions from code review * tests-params * tests-params * imports * pep8 * tests-params * formatting * fix test_metrics * typo * formatting * fix dice tests * fix decorator order * fix tests * seed * dice test * formatting * try freeze test * formatting * fix tests * try spawn * formatting * fix Co-authored-by: Jirka Borovec <Borda@users.noreply.github.com> Co-authored-by: J. Borovec <jirka.borovec@seznam.cz> Co-authored-by: Xavier Sumba <c.uent@hotmail.com> Co-authored-by: Jirka <jirka@pytorchlightning.ai> Co-authored-by: Nicki Skafte <nugginea@gmail.com>
2020-06-13 12:47:25 +00:00
New metric classes (#1326) (#1877) * New metric classes (#1326) * Create metrics package * Create metric.py * Create utils.py * Create __init__.py * add tests for metric utils * add docstrings for metrics utils * add function to recursively apply other function to collection * add tests for this function * update test * Update pytorch_lightning/metrics/metric.py Co-Authored-By: Jirka Borovec <Borda@users.noreply.github.com> * update metric name * remove example docs * fix tests * add metric tests * fix to tensor conversion * fix apply to collection * Update CHANGELOG.md * Update pytorch_lightning/metrics/metric.py Co-Authored-By: Jirka Borovec <Borda@users.noreply.github.com> * remove tests from init * add missing type annotations * rename utils to convertors * Create metrics.rst * Update index.rst * Update index.rst * Update pytorch_lightning/metrics/convertors.py Co-Authored-By: Jirka Borovec <Borda@users.noreply.github.com> * Update pytorch_lightning/metrics/convertors.py Co-Authored-By: Jirka Borovec <Borda@users.noreply.github.com> * Update pytorch_lightning/metrics/convertors.py Co-Authored-By: Jirka Borovec <Borda@users.noreply.github.com> * Update pytorch_lightning/metrics/metric.py Co-Authored-By: Jirka Borovec <Borda@users.noreply.github.com> * Update tests/utilities/test_apply_to_collection.py Co-Authored-By: Jirka Borovec <Borda@users.noreply.github.com> * Update tests/utilities/test_apply_to_collection.py Co-Authored-By: Jirka Borovec <Borda@users.noreply.github.com> * Update tests/metrics/convertors.py Co-Authored-By: Jirka Borovec <Borda@users.noreply.github.com> * Apply suggestions from code review Co-Authored-By: Jirka Borovec <Borda@users.noreply.github.com> * add doctest example * rename file and fix imports * added parametrized test * replace lambda with inlined function * rename apply_to_collection to apply_func * Separated class description from init args * Apply suggestions from code review Co-Authored-By: Jirka Borovec <Borda@users.noreply.github.com> * adjust random values * suppress output when seeding * remove gpu from doctest * Add requested changes and add ellipsis for doctest * forgot to push these files... * add explicit check for dtype to convert to * fix ddp tests * remove explicit ddp destruction Co-authored-by: Jirka Borovec <Borda@users.noreply.github.com> * move dtype device mixin to more general place * refactor to general device dtype mixin * add initial metric package description * change default to none for mac os * pep8 * fix import * Update index.rst * Update ci-testing.yml * Apply suggestions from code review Co-authored-by: Adrian Wälchli <aedu.waelchli@gmail.com> * Update CHANGELOG.md * Update pytorch_lightning/metrics/converters.py * readme * Update metric.py * Update pytorch_lightning/metrics/converters.py Co-authored-by: Jirka Borovec <Borda@users.noreply.github.com> Co-authored-by: William Falcon <waf2107@columbia.edu> Co-authored-by: Adrian Wälchli <aedu.waelchli@gmail.com> Co-authored-by: Jirka <jirka@pytorchlightning.ai>
2020-05-19 15:05:07 +00:00
def __init__(self, name: str):
"""
Args:
name: the metric's name
"""
super().__init__()
self.name = name
@abstractmethod
def forward(self, *args, **kwargs) -> torch.Tensor:
"""
Implements the actual metric computation.
Returns:
metric value
"""
raise NotImplementedError
class TensorMetric(Metric):
"""
Base class for metric implementation operating directly on tensors.
All inputs and outputs will be casted to tensors if necessary.
Already handles DDP sync and input/output conversions.
"""
Native torch metrics (#1488) * Create metric.py * Create utils.py * Create __init__.py * Create __init__.py * Create __init__.py * add tests for metric utils * add tests for metric utils * add docstrings for metrics utils * add docstrings for metrics utils * add function to recursively apply other function to collection * add function to recursively apply other function to collection * add tests for this function * add tests for this function * add tests for this function * update test * update test * Update pytorch_lightning/metrics/metric.py Co-Authored-By: Jirka Borovec <Borda@users.noreply.github.com> * update metric name * remove example docs * fix tests * fix tests * add metric tests * fix to tensor conversion * fix to tensor conversion * fix apply to collection * fix apply to collection * Update pytorch_lightning/metrics/metric.py Co-Authored-By: Jirka Borovec <Borda@users.noreply.github.com> * remove tests from init * remove tests from init * add missing type annotations * rename utils to convertors * rename utils to convertors * rename utils to convertors * rename utils to convertors * Update pytorch_lightning/metrics/convertors.py Co-Authored-By: Jirka Borovec <Borda@users.noreply.github.com> * Update pytorch_lightning/metrics/convertors.py Co-Authored-By: Jirka Borovec <Borda@users.noreply.github.com> * Update pytorch_lightning/metrics/convertors.py Co-Authored-By: Jirka Borovec <Borda@users.noreply.github.com> * Update pytorch_lightning/metrics/convertors.py Co-Authored-By: Jirka Borovec <Borda@users.noreply.github.com> * Update pytorch_lightning/metrics/convertors.py Co-Authored-By: Jirka Borovec <Borda@users.noreply.github.com> * Update pytorch_lightning/metrics/convertors.py Co-Authored-By: Jirka Borovec <Borda@users.noreply.github.com> * Update pytorch_lightning/metrics/metric.py Co-Authored-By: Jirka Borovec <Borda@users.noreply.github.com> * Update tests/utilities/test_apply_to_collection.py Co-Authored-By: Jirka Borovec <Borda@users.noreply.github.com> * Update tests/utilities/test_apply_to_collection.py Co-Authored-By: Jirka Borovec <Borda@users.noreply.github.com> * Update tests/utilities/test_apply_to_collection.py Co-Authored-By: Jirka Borovec <Borda@users.noreply.github.com> * Update tests/utilities/test_apply_to_collection.py Co-Authored-By: Jirka Borovec <Borda@users.noreply.github.com> * Update tests/metrics/convertors.py Co-Authored-By: Jirka Borovec <Borda@users.noreply.github.com> * Update tests/metrics/convertors.py Co-Authored-By: Jirka Borovec <Borda@users.noreply.github.com> * Apply suggestions from code review Co-Authored-By: Jirka Borovec <Borda@users.noreply.github.com> * Apply suggestions from code review Co-Authored-By: Jirka Borovec <Borda@users.noreply.github.com> * Apply suggestions from code review Co-Authored-By: Jirka Borovec <Borda@users.noreply.github.com> * add doctest example * rename file and fix imports * rename file and fix imports * added parametrized test * added parametrized test * replace lambda with inlined function * rename apply_to_collection to apply_func * rename apply_to_collection to apply_func * rename apply_to_collection to apply_func * Separated class description from init args * Apply suggestions from code review Co-Authored-By: Jirka Borovec <Borda@users.noreply.github.com> * adjust random values * suppress output when seeding * remove gpu from doctest * Add requested changes and add ellipsis for doctest * Add requested changes and add ellipsis for doctest * Add requested changes and add ellipsis for doctest * forgot to push these files... * forgot to push these files... * forgot to push these files... * add explicit check for dtype to convert to * add explicit check for dtype to convert to * fix ddp tests * fix ddp tests * fix ddp tests * remove explicit ddp destruction * remove explicit ddp destruction * New metric classes (#1326) * Create metrics package * Create metric.py * Create utils.py * Create __init__.py * add tests for metric utils * add docstrings for metrics utils * add function to recursively apply other function to collection * add tests for this function * update test * Update pytorch_lightning/metrics/metric.py Co-Authored-By: Jirka Borovec <Borda@users.noreply.github.com> * update metric name * remove example docs * fix tests * add metric tests * fix to tensor conversion * fix apply to collection * Update CHANGELOG.md * Update pytorch_lightning/metrics/metric.py Co-Authored-By: Jirka Borovec <Borda@users.noreply.github.com> * remove tests from init * add missing type annotations * rename utils to convertors * Create metrics.rst * Update index.rst * Update index.rst * Update pytorch_lightning/metrics/convertors.py Co-Authored-By: Jirka Borovec <Borda@users.noreply.github.com> * Update pytorch_lightning/metrics/convertors.py Co-Authored-By: Jirka Borovec <Borda@users.noreply.github.com> * Update pytorch_lightning/metrics/convertors.py Co-Authored-By: Jirka Borovec <Borda@users.noreply.github.com> * Update pytorch_lightning/metrics/metric.py Co-Authored-By: Jirka Borovec <Borda@users.noreply.github.com> * Update tests/utilities/test_apply_to_collection.py Co-Authored-By: Jirka Borovec <Borda@users.noreply.github.com> * Update tests/utilities/test_apply_to_collection.py Co-Authored-By: Jirka Borovec <Borda@users.noreply.github.com> * Update tests/metrics/convertors.py Co-Authored-By: Jirka Borovec <Borda@users.noreply.github.com> * Apply suggestions from code review Co-Authored-By: Jirka Borovec <Borda@users.noreply.github.com> * add doctest example * rename file and fix imports * added parametrized test * replace lambda with inlined function * rename apply_to_collection to apply_func * Separated class description from init args * Apply suggestions from code review Co-Authored-By: Jirka Borovec <Borda@users.noreply.github.com> * adjust random values * suppress output when seeding * remove gpu from doctest * Add requested changes and add ellipsis for doctest * forgot to push these files... * add explicit check for dtype to convert to * fix ddp tests * remove explicit ddp destruction Co-authored-by: Jirka Borovec <Borda@users.noreply.github.com> * add function to reduce tensors (similar to reduction in torch.nn) * add functionals of reduction metrics * add functionals of reduction metrics * add more metrics * pep8 fixes * rename * rename * add reduction tests * add first classification tests * bugfixes * bugfixes * add more unit tests * fix roc score metric * fix tests * solve tests * fix docs * Update CHANGELOG.md * remove binaries * solve changes from rebase * add eos * test auc independently * fix formatting * docs * docs * chlog * move * function descriptions * Add documentation to native metrics (#2144) * add docs * add docs * Apply suggestions from code review * formatting * add docs Co-authored-by: Jirka Borovec <Borda@users.noreply.github.com> Co-authored-by: Jirka <jirka@pytorchlightning.ai> * Rename tests/metrics/test_classification.py to tests/metrics/functional/test_classification.py * Rename tests/metrics/test_reduction.py to tests/metrics/functional/test_reduction.py * Add module interface for classification metrics * add basic tests for classification metrics' module interface * pep8 * add additional converters * add additional base class * change baseclass for some metrics * update classification tests * update converter tests * update metric tests * Apply suggestions from code review * tests-params * tests-params * imports * pep8 * tests-params * formatting * fix test_metrics * typo * formatting * fix dice tests * fix decorator order * fix tests * seed * dice test * formatting * try freeze test * formatting * fix tests * try spawn * formatting * fix Co-authored-by: Jirka Borovec <Borda@users.noreply.github.com> Co-authored-by: J. Borovec <jirka.borovec@seznam.cz> Co-authored-by: Xavier Sumba <c.uent@hotmail.com> Co-authored-by: Jirka <jirka@pytorchlightning.ai> Co-authored-by: Nicki Skafte <nugginea@gmail.com>
2020-06-13 12:47:25 +00:00
New metric classes (#1326) (#1877) * New metric classes (#1326) * Create metrics package * Create metric.py * Create utils.py * Create __init__.py * add tests for metric utils * add docstrings for metrics utils * add function to recursively apply other function to collection * add tests for this function * update test * Update pytorch_lightning/metrics/metric.py Co-Authored-By: Jirka Borovec <Borda@users.noreply.github.com> * update metric name * remove example docs * fix tests * add metric tests * fix to tensor conversion * fix apply to collection * Update CHANGELOG.md * Update pytorch_lightning/metrics/metric.py Co-Authored-By: Jirka Borovec <Borda@users.noreply.github.com> * remove tests from init * add missing type annotations * rename utils to convertors * Create metrics.rst * Update index.rst * Update index.rst * Update pytorch_lightning/metrics/convertors.py Co-Authored-By: Jirka Borovec <Borda@users.noreply.github.com> * Update pytorch_lightning/metrics/convertors.py Co-Authored-By: Jirka Borovec <Borda@users.noreply.github.com> * Update pytorch_lightning/metrics/convertors.py Co-Authored-By: Jirka Borovec <Borda@users.noreply.github.com> * Update pytorch_lightning/metrics/metric.py Co-Authored-By: Jirka Borovec <Borda@users.noreply.github.com> * Update tests/utilities/test_apply_to_collection.py Co-Authored-By: Jirka Borovec <Borda@users.noreply.github.com> * Update tests/utilities/test_apply_to_collection.py Co-Authored-By: Jirka Borovec <Borda@users.noreply.github.com> * Update tests/metrics/convertors.py Co-Authored-By: Jirka Borovec <Borda@users.noreply.github.com> * Apply suggestions from code review Co-Authored-By: Jirka Borovec <Borda@users.noreply.github.com> * add doctest example * rename file and fix imports * added parametrized test * replace lambda with inlined function * rename apply_to_collection to apply_func * Separated class description from init args * Apply suggestions from code review Co-Authored-By: Jirka Borovec <Borda@users.noreply.github.com> * adjust random values * suppress output when seeding * remove gpu from doctest * Add requested changes and add ellipsis for doctest * forgot to push these files... * add explicit check for dtype to convert to * fix ddp tests * remove explicit ddp destruction Co-authored-by: Jirka Borovec <Borda@users.noreply.github.com> * move dtype device mixin to more general place * refactor to general device dtype mixin * add initial metric package description * change default to none for mac os * pep8 * fix import * Update index.rst * Update ci-testing.yml * Apply suggestions from code review Co-authored-by: Adrian Wälchli <aedu.waelchli@gmail.com> * Update CHANGELOG.md * Update pytorch_lightning/metrics/converters.py * readme * Update metric.py * Update pytorch_lightning/metrics/converters.py Co-authored-by: Jirka Borovec <Borda@users.noreply.github.com> Co-authored-by: William Falcon <waf2107@columbia.edu> Co-authored-by: Adrian Wälchli <aedu.waelchli@gmail.com> Co-authored-by: Jirka <jirka@pytorchlightning.ai>
2020-05-19 15:05:07 +00:00
def __init__(self, name: str,
reduce_group: Optional[Any] = None,
reduce_op: Optional[Any] = None):
"""
Args:
name: the metric's name
reduce_group: the process group for DDP reduces (only needed for DDP training).
Defaults to all processes (world)
reduce_op: the operation to perform during reduction within DDP (only needed for DDP training).
Defaults to sum.
"""
super().__init__(name)
self._orig_call = tensor_metric(group=reduce_group,
reduce_op=reduce_op)(super().__call__)
def __call__(self, *args, **kwargs) -> torch.Tensor:
def _to_device_dtype(x: torch.Tensor) -> torch.Tensor:
return x.to(device=self.device, dtype=self.dtype, non_blocking=True)
return apply_to_collection(self._orig_call(*args, **kwargs), torch.Tensor,
_to_device_dtype)
Native torch metrics (#1488) * Create metric.py * Create utils.py * Create __init__.py * Create __init__.py * Create __init__.py * add tests for metric utils * add tests for metric utils * add docstrings for metrics utils * add docstrings for metrics utils * add function to recursively apply other function to collection * add function to recursively apply other function to collection * add tests for this function * add tests for this function * add tests for this function * update test * update test * Update pytorch_lightning/metrics/metric.py Co-Authored-By: Jirka Borovec <Borda@users.noreply.github.com> * update metric name * remove example docs * fix tests * fix tests * add metric tests * fix to tensor conversion * fix to tensor conversion * fix apply to collection * fix apply to collection * Update pytorch_lightning/metrics/metric.py Co-Authored-By: Jirka Borovec <Borda@users.noreply.github.com> * remove tests from init * remove tests from init * add missing type annotations * rename utils to convertors * rename utils to convertors * rename utils to convertors * rename utils to convertors * Update pytorch_lightning/metrics/convertors.py Co-Authored-By: Jirka Borovec <Borda@users.noreply.github.com> * Update pytorch_lightning/metrics/convertors.py Co-Authored-By: Jirka Borovec <Borda@users.noreply.github.com> * Update pytorch_lightning/metrics/convertors.py Co-Authored-By: Jirka Borovec <Borda@users.noreply.github.com> * Update pytorch_lightning/metrics/convertors.py Co-Authored-By: Jirka Borovec <Borda@users.noreply.github.com> * Update pytorch_lightning/metrics/convertors.py Co-Authored-By: Jirka Borovec <Borda@users.noreply.github.com> * Update pytorch_lightning/metrics/convertors.py Co-Authored-By: Jirka Borovec <Borda@users.noreply.github.com> * Update pytorch_lightning/metrics/metric.py Co-Authored-By: Jirka Borovec <Borda@users.noreply.github.com> * Update tests/utilities/test_apply_to_collection.py Co-Authored-By: Jirka Borovec <Borda@users.noreply.github.com> * Update tests/utilities/test_apply_to_collection.py Co-Authored-By: Jirka Borovec <Borda@users.noreply.github.com> * Update tests/utilities/test_apply_to_collection.py Co-Authored-By: Jirka Borovec <Borda@users.noreply.github.com> * Update tests/utilities/test_apply_to_collection.py Co-Authored-By: Jirka Borovec <Borda@users.noreply.github.com> * Update tests/metrics/convertors.py Co-Authored-By: Jirka Borovec <Borda@users.noreply.github.com> * Update tests/metrics/convertors.py Co-Authored-By: Jirka Borovec <Borda@users.noreply.github.com> * Apply suggestions from code review Co-Authored-By: Jirka Borovec <Borda@users.noreply.github.com> * Apply suggestions from code review Co-Authored-By: Jirka Borovec <Borda@users.noreply.github.com> * Apply suggestions from code review Co-Authored-By: Jirka Borovec <Borda@users.noreply.github.com> * add doctest example * rename file and fix imports * rename file and fix imports * added parametrized test * added parametrized test * replace lambda with inlined function * rename apply_to_collection to apply_func * rename apply_to_collection to apply_func * rename apply_to_collection to apply_func * Separated class description from init args * Apply suggestions from code review Co-Authored-By: Jirka Borovec <Borda@users.noreply.github.com> * adjust random values * suppress output when seeding * remove gpu from doctest * Add requested changes and add ellipsis for doctest * Add requested changes and add ellipsis for doctest * Add requested changes and add ellipsis for doctest * forgot to push these files... * forgot to push these files... * forgot to push these files... * add explicit check for dtype to convert to * add explicit check for dtype to convert to * fix ddp tests * fix ddp tests * fix ddp tests * remove explicit ddp destruction * remove explicit ddp destruction * New metric classes (#1326) * Create metrics package * Create metric.py * Create utils.py * Create __init__.py * add tests for metric utils * add docstrings for metrics utils * add function to recursively apply other function to collection * add tests for this function * update test * Update pytorch_lightning/metrics/metric.py Co-Authored-By: Jirka Borovec <Borda@users.noreply.github.com> * update metric name * remove example docs * fix tests * add metric tests * fix to tensor conversion * fix apply to collection * Update CHANGELOG.md * Update pytorch_lightning/metrics/metric.py Co-Authored-By: Jirka Borovec <Borda@users.noreply.github.com> * remove tests from init * add missing type annotations * rename utils to convertors * Create metrics.rst * Update index.rst * Update index.rst * Update pytorch_lightning/metrics/convertors.py Co-Authored-By: Jirka Borovec <Borda@users.noreply.github.com> * Update pytorch_lightning/metrics/convertors.py Co-Authored-By: Jirka Borovec <Borda@users.noreply.github.com> * Update pytorch_lightning/metrics/convertors.py Co-Authored-By: Jirka Borovec <Borda@users.noreply.github.com> * Update pytorch_lightning/metrics/metric.py Co-Authored-By: Jirka Borovec <Borda@users.noreply.github.com> * Update tests/utilities/test_apply_to_collection.py Co-Authored-By: Jirka Borovec <Borda@users.noreply.github.com> * Update tests/utilities/test_apply_to_collection.py Co-Authored-By: Jirka Borovec <Borda@users.noreply.github.com> * Update tests/metrics/convertors.py Co-Authored-By: Jirka Borovec <Borda@users.noreply.github.com> * Apply suggestions from code review Co-Authored-By: Jirka Borovec <Borda@users.noreply.github.com> * add doctest example * rename file and fix imports * added parametrized test * replace lambda with inlined function * rename apply_to_collection to apply_func * Separated class description from init args * Apply suggestions from code review Co-Authored-By: Jirka Borovec <Borda@users.noreply.github.com> * adjust random values * suppress output when seeding * remove gpu from doctest * Add requested changes and add ellipsis for doctest * forgot to push these files... * add explicit check for dtype to convert to * fix ddp tests * remove explicit ddp destruction Co-authored-by: Jirka Borovec <Borda@users.noreply.github.com> * add function to reduce tensors (similar to reduction in torch.nn) * add functionals of reduction metrics * add functionals of reduction metrics * add more metrics * pep8 fixes * rename * rename * add reduction tests * add first classification tests * bugfixes * bugfixes * add more unit tests * fix roc score metric * fix tests * solve tests * fix docs * Update CHANGELOG.md * remove binaries * solve changes from rebase * add eos * test auc independently * fix formatting * docs * docs * chlog * move * function descriptions * Add documentation to native metrics (#2144) * add docs * add docs * Apply suggestions from code review * formatting * add docs Co-authored-by: Jirka Borovec <Borda@users.noreply.github.com> Co-authored-by: Jirka <jirka@pytorchlightning.ai> * Rename tests/metrics/test_classification.py to tests/metrics/functional/test_classification.py * Rename tests/metrics/test_reduction.py to tests/metrics/functional/test_reduction.py * Add module interface for classification metrics * add basic tests for classification metrics' module interface * pep8 * add additional converters * add additional base class * change baseclass for some metrics * update classification tests * update converter tests * update metric tests * Apply suggestions from code review * tests-params * tests-params * imports * pep8 * tests-params * formatting * fix test_metrics * typo * formatting * fix dice tests * fix decorator order * fix tests * seed * dice test * formatting * try freeze test * formatting * fix tests * try spawn * formatting * fix Co-authored-by: Jirka Borovec <Borda@users.noreply.github.com> Co-authored-by: J. Borovec <jirka.borovec@seznam.cz> Co-authored-by: Xavier Sumba <c.uent@hotmail.com> Co-authored-by: Jirka <jirka@pytorchlightning.ai> Co-authored-by: Nicki Skafte <nugginea@gmail.com>
2020-06-13 12:47:25 +00:00
class TensorCollectionMetric(Metric):
"""
Base class for metric implementation operating directly on tensors.
All inputs will be casted to tensors if necessary. Outputs won't be casted.
Already handles DDP sync and input conversions.
This class differs from :class:`TensorMetric`, as it assumes all outputs to
be collections of tensors and does not explicitly convert them. This is
necessary, since some collections (like for ROC, Precision-Recall Curve etc.)
cannot be converted to tensors at the highest level.
All numpy arrays and numbers occuring in these outputs will still be converted.
Use this class as a baseclass, whenever you want to ensure inputs are
tensors and outputs cannot be converted to tensors automatically
"""
def __init__(self, name: str,
reduce_group: Optional[Any] = None,
reduce_op: Optional[Any] = None):
"""
Args:
name: the metric's name
reduce_group: the process group for DDP reduces (only needed for DDP training).
Defaults to all processes (world)
reduce_op: the operation to perform during reduction within DDP (only needed for DDP training).
Defaults to sum.
"""
super().__init__(name)
self._orig_call = tensor_collection_metric(group=reduce_group,
reduce_op=reduce_op)(super().__call__)
def __call__(self, *args, **kwargs) -> torch.Tensor:
def _to_device_dtype(x: torch.Tensor) -> torch.Tensor:
return x.to(device=self.device, dtype=self.dtype, non_blocking=True)
return apply_to_collection(self._orig_call(*args, **kwargs), torch.Tensor,
_to_device_dtype)
New metric classes (#1326) (#1877) * New metric classes (#1326) * Create metrics package * Create metric.py * Create utils.py * Create __init__.py * add tests for metric utils * add docstrings for metrics utils * add function to recursively apply other function to collection * add tests for this function * update test * Update pytorch_lightning/metrics/metric.py Co-Authored-By: Jirka Borovec <Borda@users.noreply.github.com> * update metric name * remove example docs * fix tests * add metric tests * fix to tensor conversion * fix apply to collection * Update CHANGELOG.md * Update pytorch_lightning/metrics/metric.py Co-Authored-By: Jirka Borovec <Borda@users.noreply.github.com> * remove tests from init * add missing type annotations * rename utils to convertors * Create metrics.rst * Update index.rst * Update index.rst * Update pytorch_lightning/metrics/convertors.py Co-Authored-By: Jirka Borovec <Borda@users.noreply.github.com> * Update pytorch_lightning/metrics/convertors.py Co-Authored-By: Jirka Borovec <Borda@users.noreply.github.com> * Update pytorch_lightning/metrics/convertors.py Co-Authored-By: Jirka Borovec <Borda@users.noreply.github.com> * Update pytorch_lightning/metrics/metric.py Co-Authored-By: Jirka Borovec <Borda@users.noreply.github.com> * Update tests/utilities/test_apply_to_collection.py Co-Authored-By: Jirka Borovec <Borda@users.noreply.github.com> * Update tests/utilities/test_apply_to_collection.py Co-Authored-By: Jirka Borovec <Borda@users.noreply.github.com> * Update tests/metrics/convertors.py Co-Authored-By: Jirka Borovec <Borda@users.noreply.github.com> * Apply suggestions from code review Co-Authored-By: Jirka Borovec <Borda@users.noreply.github.com> * add doctest example * rename file and fix imports * added parametrized test * replace lambda with inlined function * rename apply_to_collection to apply_func * Separated class description from init args * Apply suggestions from code review Co-Authored-By: Jirka Borovec <Borda@users.noreply.github.com> * adjust random values * suppress output when seeding * remove gpu from doctest * Add requested changes and add ellipsis for doctest * forgot to push these files... * add explicit check for dtype to convert to * fix ddp tests * remove explicit ddp destruction Co-authored-by: Jirka Borovec <Borda@users.noreply.github.com> * move dtype device mixin to more general place * refactor to general device dtype mixin * add initial metric package description * change default to none for mac os * pep8 * fix import * Update index.rst * Update ci-testing.yml * Apply suggestions from code review Co-authored-by: Adrian Wälchli <aedu.waelchli@gmail.com> * Update CHANGELOG.md * Update pytorch_lightning/metrics/converters.py * readme * Update metric.py * Update pytorch_lightning/metrics/converters.py Co-authored-by: Jirka Borovec <Borda@users.noreply.github.com> Co-authored-by: William Falcon <waf2107@columbia.edu> Co-authored-by: Adrian Wälchli <aedu.waelchli@gmail.com> Co-authored-by: Jirka <jirka@pytorchlightning.ai>
2020-05-19 15:05:07 +00:00
class NumpyMetric(Metric):
"""
Base class for metric implementation operating on numpy arrays.
All inputs will be casted to numpy if necessary and all outputs will
be casted to tensors if necessary.
Already handles DDP sync and input/output conversions.
"""
Native torch metrics (#1488) * Create metric.py * Create utils.py * Create __init__.py * Create __init__.py * Create __init__.py * add tests for metric utils * add tests for metric utils * add docstrings for metrics utils * add docstrings for metrics utils * add function to recursively apply other function to collection * add function to recursively apply other function to collection * add tests for this function * add tests for this function * add tests for this function * update test * update test * Update pytorch_lightning/metrics/metric.py Co-Authored-By: Jirka Borovec <Borda@users.noreply.github.com> * update metric name * remove example docs * fix tests * fix tests * add metric tests * fix to tensor conversion * fix to tensor conversion * fix apply to collection * fix apply to collection * Update pytorch_lightning/metrics/metric.py Co-Authored-By: Jirka Borovec <Borda@users.noreply.github.com> * remove tests from init * remove tests from init * add missing type annotations * rename utils to convertors * rename utils to convertors * rename utils to convertors * rename utils to convertors * Update pytorch_lightning/metrics/convertors.py Co-Authored-By: Jirka Borovec <Borda@users.noreply.github.com> * Update pytorch_lightning/metrics/convertors.py Co-Authored-By: Jirka Borovec <Borda@users.noreply.github.com> * Update pytorch_lightning/metrics/convertors.py Co-Authored-By: Jirka Borovec <Borda@users.noreply.github.com> * Update pytorch_lightning/metrics/convertors.py Co-Authored-By: Jirka Borovec <Borda@users.noreply.github.com> * Update pytorch_lightning/metrics/convertors.py Co-Authored-By: Jirka Borovec <Borda@users.noreply.github.com> * Update pytorch_lightning/metrics/convertors.py Co-Authored-By: Jirka Borovec <Borda@users.noreply.github.com> * Update pytorch_lightning/metrics/metric.py Co-Authored-By: Jirka Borovec <Borda@users.noreply.github.com> * Update tests/utilities/test_apply_to_collection.py Co-Authored-By: Jirka Borovec <Borda@users.noreply.github.com> * Update tests/utilities/test_apply_to_collection.py Co-Authored-By: Jirka Borovec <Borda@users.noreply.github.com> * Update tests/utilities/test_apply_to_collection.py Co-Authored-By: Jirka Borovec <Borda@users.noreply.github.com> * Update tests/utilities/test_apply_to_collection.py Co-Authored-By: Jirka Borovec <Borda@users.noreply.github.com> * Update tests/metrics/convertors.py Co-Authored-By: Jirka Borovec <Borda@users.noreply.github.com> * Update tests/metrics/convertors.py Co-Authored-By: Jirka Borovec <Borda@users.noreply.github.com> * Apply suggestions from code review Co-Authored-By: Jirka Borovec <Borda@users.noreply.github.com> * Apply suggestions from code review Co-Authored-By: Jirka Borovec <Borda@users.noreply.github.com> * Apply suggestions from code review Co-Authored-By: Jirka Borovec <Borda@users.noreply.github.com> * add doctest example * rename file and fix imports * rename file and fix imports * added parametrized test * added parametrized test * replace lambda with inlined function * rename apply_to_collection to apply_func * rename apply_to_collection to apply_func * rename apply_to_collection to apply_func * Separated class description from init args * Apply suggestions from code review Co-Authored-By: Jirka Borovec <Borda@users.noreply.github.com> * adjust random values * suppress output when seeding * remove gpu from doctest * Add requested changes and add ellipsis for doctest * Add requested changes and add ellipsis for doctest * Add requested changes and add ellipsis for doctest * forgot to push these files... * forgot to push these files... * forgot to push these files... * add explicit check for dtype to convert to * add explicit check for dtype to convert to * fix ddp tests * fix ddp tests * fix ddp tests * remove explicit ddp destruction * remove explicit ddp destruction * New metric classes (#1326) * Create metrics package * Create metric.py * Create utils.py * Create __init__.py * add tests for metric utils * add docstrings for metrics utils * add function to recursively apply other function to collection * add tests for this function * update test * Update pytorch_lightning/metrics/metric.py Co-Authored-By: Jirka Borovec <Borda@users.noreply.github.com> * update metric name * remove example docs * fix tests * add metric tests * fix to tensor conversion * fix apply to collection * Update CHANGELOG.md * Update pytorch_lightning/metrics/metric.py Co-Authored-By: Jirka Borovec <Borda@users.noreply.github.com> * remove tests from init * add missing type annotations * rename utils to convertors * Create metrics.rst * Update index.rst * Update index.rst * Update pytorch_lightning/metrics/convertors.py Co-Authored-By: Jirka Borovec <Borda@users.noreply.github.com> * Update pytorch_lightning/metrics/convertors.py Co-Authored-By: Jirka Borovec <Borda@users.noreply.github.com> * Update pytorch_lightning/metrics/convertors.py Co-Authored-By: Jirka Borovec <Borda@users.noreply.github.com> * Update pytorch_lightning/metrics/metric.py Co-Authored-By: Jirka Borovec <Borda@users.noreply.github.com> * Update tests/utilities/test_apply_to_collection.py Co-Authored-By: Jirka Borovec <Borda@users.noreply.github.com> * Update tests/utilities/test_apply_to_collection.py Co-Authored-By: Jirka Borovec <Borda@users.noreply.github.com> * Update tests/metrics/convertors.py Co-Authored-By: Jirka Borovec <Borda@users.noreply.github.com> * Apply suggestions from code review Co-Authored-By: Jirka Borovec <Borda@users.noreply.github.com> * add doctest example * rename file and fix imports * added parametrized test * replace lambda with inlined function * rename apply_to_collection to apply_func * Separated class description from init args * Apply suggestions from code review Co-Authored-By: Jirka Borovec <Borda@users.noreply.github.com> * adjust random values * suppress output when seeding * remove gpu from doctest * Add requested changes and add ellipsis for doctest * forgot to push these files... * add explicit check for dtype to convert to * fix ddp tests * remove explicit ddp destruction Co-authored-by: Jirka Borovec <Borda@users.noreply.github.com> * add function to reduce tensors (similar to reduction in torch.nn) * add functionals of reduction metrics * add functionals of reduction metrics * add more metrics * pep8 fixes * rename * rename * add reduction tests * add first classification tests * bugfixes * bugfixes * add more unit tests * fix roc score metric * fix tests * solve tests * fix docs * Update CHANGELOG.md * remove binaries * solve changes from rebase * add eos * test auc independently * fix formatting * docs * docs * chlog * move * function descriptions * Add documentation to native metrics (#2144) * add docs * add docs * Apply suggestions from code review * formatting * add docs Co-authored-by: Jirka Borovec <Borda@users.noreply.github.com> Co-authored-by: Jirka <jirka@pytorchlightning.ai> * Rename tests/metrics/test_classification.py to tests/metrics/functional/test_classification.py * Rename tests/metrics/test_reduction.py to tests/metrics/functional/test_reduction.py * Add module interface for classification metrics * add basic tests for classification metrics' module interface * pep8 * add additional converters * add additional base class * change baseclass for some metrics * update classification tests * update converter tests * update metric tests * Apply suggestions from code review * tests-params * tests-params * imports * pep8 * tests-params * formatting * fix test_metrics * typo * formatting * fix dice tests * fix decorator order * fix tests * seed * dice test * formatting * try freeze test * formatting * fix tests * try spawn * formatting * fix Co-authored-by: Jirka Borovec <Borda@users.noreply.github.com> Co-authored-by: J. Borovec <jirka.borovec@seznam.cz> Co-authored-by: Xavier Sumba <c.uent@hotmail.com> Co-authored-by: Jirka <jirka@pytorchlightning.ai> Co-authored-by: Nicki Skafte <nugginea@gmail.com>
2020-06-13 12:47:25 +00:00
New metric classes (#1326) (#1877) * New metric classes (#1326) * Create metrics package * Create metric.py * Create utils.py * Create __init__.py * add tests for metric utils * add docstrings for metrics utils * add function to recursively apply other function to collection * add tests for this function * update test * Update pytorch_lightning/metrics/metric.py Co-Authored-By: Jirka Borovec <Borda@users.noreply.github.com> * update metric name * remove example docs * fix tests * add metric tests * fix to tensor conversion * fix apply to collection * Update CHANGELOG.md * Update pytorch_lightning/metrics/metric.py Co-Authored-By: Jirka Borovec <Borda@users.noreply.github.com> * remove tests from init * add missing type annotations * rename utils to convertors * Create metrics.rst * Update index.rst * Update index.rst * Update pytorch_lightning/metrics/convertors.py Co-Authored-By: Jirka Borovec <Borda@users.noreply.github.com> * Update pytorch_lightning/metrics/convertors.py Co-Authored-By: Jirka Borovec <Borda@users.noreply.github.com> * Update pytorch_lightning/metrics/convertors.py Co-Authored-By: Jirka Borovec <Borda@users.noreply.github.com> * Update pytorch_lightning/metrics/metric.py Co-Authored-By: Jirka Borovec <Borda@users.noreply.github.com> * Update tests/utilities/test_apply_to_collection.py Co-Authored-By: Jirka Borovec <Borda@users.noreply.github.com> * Update tests/utilities/test_apply_to_collection.py Co-Authored-By: Jirka Borovec <Borda@users.noreply.github.com> * Update tests/metrics/convertors.py Co-Authored-By: Jirka Borovec <Borda@users.noreply.github.com> * Apply suggestions from code review Co-Authored-By: Jirka Borovec <Borda@users.noreply.github.com> * add doctest example * rename file and fix imports * added parametrized test * replace lambda with inlined function * rename apply_to_collection to apply_func * Separated class description from init args * Apply suggestions from code review Co-Authored-By: Jirka Borovec <Borda@users.noreply.github.com> * adjust random values * suppress output when seeding * remove gpu from doctest * Add requested changes and add ellipsis for doctest * forgot to push these files... * add explicit check for dtype to convert to * fix ddp tests * remove explicit ddp destruction Co-authored-by: Jirka Borovec <Borda@users.noreply.github.com> * move dtype device mixin to more general place * refactor to general device dtype mixin * add initial metric package description * change default to none for mac os * pep8 * fix import * Update index.rst * Update ci-testing.yml * Apply suggestions from code review Co-authored-by: Adrian Wälchli <aedu.waelchli@gmail.com> * Update CHANGELOG.md * Update pytorch_lightning/metrics/converters.py * readme * Update metric.py * Update pytorch_lightning/metrics/converters.py Co-authored-by: Jirka Borovec <Borda@users.noreply.github.com> Co-authored-by: William Falcon <waf2107@columbia.edu> Co-authored-by: Adrian Wälchli <aedu.waelchli@gmail.com> Co-authored-by: Jirka <jirka@pytorchlightning.ai>
2020-05-19 15:05:07 +00:00
def __init__(self, name: str,
reduce_group: Optional[Any] = None,
reduce_op: Optional[Any] = None):
"""
Args:
name: the metric's name
reduce_group: the process group for DDP reduces (only needed for DDP training).
Defaults to all processes (world)
reduce_op: the operation to perform during reduction within DDP (only needed for DDP training).
Defaults to sum.
"""
super().__init__(name)
self._orig_call = numpy_metric(group=reduce_group,
reduce_op=reduce_op)(super().__call__)
def __call__(self, *args, **kwargs) -> torch.Tensor:
def _to_device_dtype(x: torch.Tensor) -> torch.Tensor:
return x.to(device=self.device, dtype=self.dtype, non_blocking=True)
return apply_to_collection(self._orig_call(*args, **kwargs), torch.Tensor,
_to_device_dtype)