lightning/pytorch_lightning/trainer/predict_loop.py

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Add PredictLoop (#5752) * integrate distrib_type * sync changes * sync * fixes * add forgotten generators * add missing logic * update * import * missed imports * import fixes * isort * mv f * changelog * format * move helper to parallel plugin * d * add world size * clean up * duplicate * activate ddp_sharded and tpu * set nvidia flags * remove unused colab var * use_tpu <-> on_tpu attrs * make some ddp_cpu and clusterplugin tests pass * Ref/accelerator connector (#5742) * final cleanup Co-authored-by: Adrian Wälchli <aedu.waelchli@gmail.com> * connector cleanup Co-authored-by: Adrian Wälchli <aedu.waelchli@gmail.com> * trainer cleanup Co-authored-by: Adrian Wälchli <aedu.waelchli@gmail.com> * accelerator cleanup + missing logic in accelerator connector Co-authored-by: Adrian Wälchli <aedu.waelchli@gmail.com> * add missing changes to callbacks Co-authored-by: Adrian Wälchli <aedu.waelchli@gmail.com> * reflect accelerator changes to lightning module Co-authored-by: Adrian Wälchli <aedu.waelchli@gmail.com> * clean cluster envs Co-authored-by: Adrian Wälchli <aedu.waelchli@gmail.com> * cleanup plugins Co-authored-by: Adrian Wälchli <aedu.waelchli@gmail.com> * add broadcasting Co-authored-by: Adrian Wälchli <aedu.waelchli@gmail.com> * yapf * remove plugin connector Co-authored-by: Adrian Wälchli <aedu.waelchli@gmail.com> * plugins * add predict_loop * manual optimization * clean predictloop * update optimizer routing * add predict loop on new accelerator * resolve a bug * add rank to torchelastic * add predict_loop * add predict loop on new accelerator * resolve a bug * fix memory mixed precision * update * setstate on trainer for pickling in ddp spawn * add predict_loop * clean predictloop * add predict loop on new accelerator * resolve a bug * add predict_loop * add predict loop on new accelerator * resolve a bug * add predict_loop * add predict loop on new accelerator * resolve a bug * add predict_loop * add predict loop on new accelerator * resolve a bug * add predict_loop * clean predictloop * add predict loop on new accelerator * resolve a bug * add predict_loop * add predict loop on new accelerator * resolve a bug * resolve tests * add predict method * add back commented accelerator code * adapt test for sync_batch_norm to new plugin * fix deprecated tests * fix ddp cpu choice when no num_processes are given * yapf format * skip a memory test that cannot pass anymore * remove sanetize * rename train to run_train * remove useless hooks * add misconfigurationException * remove wrong naming * resolve some legacy * udpate docstring * fix pickle error in spawn plugin * x * avoid * x * fix cyclic import in docs build * add support for sharded * update typing * add sharded and sharded_spawn to distributed types * make unwrap model default * refactor LightningShardedDataParallel similar to LightningDistributedDataParallel * update sharded spawn to reflect changes * update sharded to reflect changes * Merge 1.1.5 changes * fix merge * fix merge * yapf isort * fix merge * yapf isort * fix indentation in test * copy over reinit scheduler implementation from dev1.2 * fix apex tracking calls with dev_debugger * reduce diff to dev1.2, clean up * fix trainer config test when gpus>0 and num_processes >0 and ddp_cpu * sort plugin tests legacy/new * fix error handling for amp on cpu * fix merge fix merge fix merge * [Feat] Resolve manual_backward (#5837) * resolve manual_backward * resolve flake8 * update * resolve for ddp_spawn * resolve flake8 * resolve flake8 * resolve flake8 Co-authored-by: Ubuntu <ubuntu@ip-172-31-88-60.ec2.internal> * fix tests/accelerator tests on cpu * [BugFix] Resolve manual optimization (#5852) * resolve manual_optimization * update * update Co-authored-by: Ubuntu <ubuntu@ip-172-31-88-60.ec2.internal> * Remove copy trainer parameters to happen earlier within the loop and add safe guard to get ref model (#5856) * resovle a bug * Accelerator refactor sharded rpc (#5854) * rpc branch * merge * update handling of rpc * make devices etc. Optional in RPC * set devices etc. later if necessary * remove devices from sequential * make devices optional in rpc * fix import * uncomment everything * fix cluster selection Co-authored-by: Ubuntu <ubuntu@ip-172-31-88-60.ec2.internal> * resolve bug * fix assert in rpc test * resolve a test * fix docs compilation * accelerator refactor - fix for sharded parity test (#5866) * fix memory issue with ddp_spawn * x x x x x x x x x * x * Remove DDP2 as this does not apply * Add missing pre optimizer hook to ensure lambda closure is called * fix apex docstring * [accelerator][BugFix] Resolve some test for 1 gpu (#5863) * update * revert init * resolve a bug * update * resolve flake8 * update * update * update * revert init * resolve a bug * update * resolve flake8 * update * update * update * update * update * revert init * resolve a bug * update * resolve flake8 * update * update * update * revert init * update * resolve flake8 * update * update * update * update * update * all_gather * update * make plugins work, add misconfig for RPC * update * update * remove breaking test * resolve some tests * resolve flake8 * revert to ddp_spawn Co-authored-by: root <root@ip-172-31-88-60.ec2.internal> Co-authored-by: Ubuntu <ubuntu@ip-172-31-88-60.ec2.internal> Co-authored-by: Justus Schock <justus.schock@rwth-aachen.de> * yapf isort * resolve flake8 * fix apex doctests * fix apex doctests 2 * resolve docs * update drone * clean env * update * update * update * update * merge * Fix RPC related tests, clean out old API, update for new accelerator API [skip ci] (#5881) * Fix RPC related tests, clean out old API, update for new accelerator API * Move tests out of legacy folder, update paths and names * Update test_remove_1-4.py * Expose properties for tpu cores/gpus/num_gpus * Add root GPU property * Move properties to properties.py * move tests that were previously in drone * Fix root GPU property (#5908) * Move root GPU to property, remove horovod set as this is handled in horovod plugin, ensure we mock correctly to set GPU accelerator * Add missing tests back * fix best model path transfer when no checkpoint callback available * Fix setup hook order [wip] (#5858) * Call trainer setup hook before accelerator setup * Add test case * add new test * typo * fix callback order in test Co-authored-by: tchaton <thomas@grid.ai> Co-authored-by: Adrian Wälchli <aedu.waelchli@gmail.com> * rename ddp sequential -> rpc sequential for special test * revert * fix stupid merge problem * Use property in connector for sampler (#5913) * merge the import conflicts * fix spawning of processes in slurm * [wip] Fix some bugs for TPU [skip ci] (#5878) * fixed for single tpu * fixed spawn * fixed spawn * update * update * wip * resolve bugs * resolve bug * update on comment * removed decorator * resolve comments * set to 4 * update * update * need cleaning * update * update * update * resolve flake8 * resolve bugs * exclude broadcast * resolve bugs * change test * update * update * skip if meet fails * properly raise trace * update * add catch * wrap test * resolve typo * update * typo Co-authored-by: Lezwon Castelino <lezwon@gmail.com> Co-authored-by: Your Name <you@example.com> * resolve some tests * update * fix imports * update * resolve flake8 * update azure pipeline * skip a sharded test on cpu that requires a gpu * resolve tpus * resolve bug * resolve flake8 * update * updat utils * revert permission change on files * suggestions from carlos Co-authored-by: Carlos Mocholí <carlossmocholi@gmail.com> * remove unrelated formatting changes * remove incomplete comment * Update pytorch_lightning/accelerators/__init__.py Co-authored-by: Carlos Mocholí <carlossmocholi@gmail.com> * remove unrelated formatting change * add types * warn 1.7 ddp manual backward only if ddp kwarg unset * yapf + isort * pep8 unused imports * fix cyclic import in docs * Apply suggestions from code review * typer in accelerator.py * typo * resolve flake8 * update code * update * Update pytorch_lightning/trainer/predict_loop.py Co-authored-by: Carlos Mocholí <carlossmocholi@gmail.com> * Update pytorch_lightning/trainer/predict_loop.py Co-authored-by: Carlos Mocholí <carlossmocholi@gmail.com> * fix merge * fix merge * reset legacy accelerator * add missing rename dispatch * rename post traning * update code * resolved comments * typo * typo * add flow description * resolve comments * update on comments * update flow * add backticks * resolve tpu Co-authored-by: Adrian Wälchli <aedu.waelchli@gmail.com> Co-authored-by: Justus Schock <12886177+justusschock@users.noreply.github.com> Co-authored-by: justusschock <justus.schock@posteo.de> Co-authored-by: Justus Schock <justus.schock@rwth-aachen.de> Co-authored-by: Ubuntu <ubuntu@ip-172-31-88-60.ec2.internal> Co-authored-by: Sean Naren <sean.narenthiran@gmail.com> Co-authored-by: SeanNaren <sean@grid.ai> Co-authored-by: root <root@ip-172-31-88-60.ec2.internal> Co-authored-by: Lezwon Castelino <lezwon@gmail.com> Co-authored-by: Your Name <you@example.com> Co-authored-by: Carlos Mocholí <carlossmocholi@gmail.com> Co-authored-by: Jirka Borovec <Borda@users.noreply.github.com> Co-authored-by: mergify[bot] <37929162+mergify[bot]@users.noreply.github.com>
2021-02-16 22:11:56 +00:00
# Copyright The PyTorch Lightning team.
#
# Licensed under the Apache License, Version 2.0 (the "License");
# you may not use this file except in compliance with the License.
# You may obtain a copy of the License at
#
# http://www.apache.org/licenses/LICENSE-2.0
#
# Unless required by applicable law or agreed to in writing, software
# distributed under the License is distributed on an "AS IS" BASIS,
# WITHOUT WARRANTIES OR CONDITIONS OF ANY KIND, either express or implied.
# See the License for the specific language governing permissions and
# limitations under the License.
import torch
from pytorch_lightning.utilities.apply_func import apply_to_collection
class PredictLoop(object):
def __init__(self, trainer):
self.trainer = trainer
self.max_batches = None
self.num_dataloaders = None
def on_trainer_init(self):
self.trainer.num_predict_batches = []
def get_predict_dataloaders(self, max_batches):
# select dataloaders
model = self.trainer.get_model()
self.trainer.reset_predict_dataloader(model)
dataloaders = self.trainer.predict_dataloaders
if max_batches is None:
max_batches = self.trainer.num_predict_batches
return dataloaders, max_batches
def should_skip_predict(self, dataloaders, max_batches):
return dataloaders is None or not sum(max_batches)
def on_predict_model_eval(self, *_, **__):
model_ref = self.trainer.get_model()
model_ref.on_predict_model_eval()
def setup(self, model, max_batches, dataloaders):
# copy properties for forward overrides
self.trainer.model_connector.copy_trainer_model_properties(model)
# convert max_batches to list
if isinstance(max_batches, int):
max_batches = [max_batches] * len(dataloaders)
self.max_batches = max_batches
self.num_dataloaders = self._get_num_dataloaders(dataloaders)
self._predictions = [[] for _ in range(self.num_dataloaders)]
self.trainer._progress_bar_callback.on_predict_start(self.trainer, self.trainer.get_model())
def _get_num_dataloaders(self, dataloaders):
# case where user does:
# return dl1, dl2
length = len(dataloaders)
if len(dataloaders) > 0 and isinstance(dataloaders[0], (list, tuple)):
length = len(dataloaders[0])
return length
def predict(self, batch, batch_idx, dataloader_idx):
# configure args
args = [batch, batch_idx]
if self.num_dataloaders:
args.append(dataloader_idx)
model_ref = self.trainer.get_model()
model_ref._current_fx_name = "predict"
predictions = self.trainer.accelerator_backend.predict(args)
self._predictions[dataloader_idx].append(predictions)
self.trainer._progress_bar_callback.on_predict_batch_end(
self.trainer, model_ref, predictions, batch, batch_idx, dataloader_idx
)
return
def on_predict_epoch_end(self):
self.trainer._progress_bar_callback.on_predict_end(self.trainer, self.trainer.get_model())
results = self._predictions
def _convert_to_numpy(v):
return v.cpu().numpy()
results = apply_to_collection(results, torch.Tensor, _convert_to_numpy)
if len(results) == 1:
return results[0]
return results