lightning/docs/source/child_modules.rst

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doctest for .rst files (#1511) * add doctest to circleci * Revert "add doctest to circleci" This reverts commit c45b34ea911a81f87989f6c3a832b1e8d8c471c6. * Revert "Revert "add doctest to circleci"" This reverts commit 41fca97fdcfe1cf4f6bdb3bbba75d25fa3b11f70. * doctest docs rst files * Revert "doctest docs rst files" This reverts commit b4a2e83e3da5ed1909de500ec14b6b614527c07f. * doctest only rst * doctest debugging.rst * doctest apex * doctest callbacks * doctest early stopping * doctest for child modules * doctest experiment reporting * indentation * doctest fast training * doctest for hyperparams * doctests for lr_finder * doctests multi-gpu * more doctest * make doctest drone * fix label build error * update fast training * update invalid imports * fix problem with int device count * rebase stuff * wip * wip * wip * intro guide * add missing code block * circleci * logger import for doctest * test if doctest runs on drone * fix mnist download * also run install deps for building docs * install cmake * try sudo * hide output * try pip stuff * try to mock horovod * Tranfer -> Transfer * add torchvision to extras * revert pip stuff * mlflow file location * do not mock torch * torchvision * drone extra req. * try higher sphinx version * Revert "try higher sphinx version" This reverts commit 490ac28e46d6fd52352640dfdf0d765befa56988. * try coverage command * try coverage command * try undoc flag * newline * undo drone * report coverage * review Co-authored-by: Jirka Borovec <Borda@users.noreply.github.com> * remove torchvision from extras * skip tests only if torchvision not available * fix testoutput torchvision Co-authored-by: Jirka Borovec <Borda@users.noreply.github.com>
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.. testsetup:: *
import torch
from pytorch_lightning.trainer.trainer import Trainer
from pytorch_lightning.callbacks.base import Callback
from pytorch_lightning.core.lightning import LightningModule
class LitMNIST(LightningModule):
def __init__(self):
super().__init__()
def train_dataloader():
pass
def val_dataloader():
pass
Child Modules
-------------
Research projects tend to test different approaches to the same dataset.
This is very easy to do in Lightning with inheritance.
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For example, imagine we now want to train an Autoencoder to use as a feature extractor for MNIST images.
Recall that `LitMNIST` already defines all the dataloading etc... The only things
that change in the `Autoencoder` model are the init, forward, training, validation and test step.
doctest for .rst files (#1511) * add doctest to circleci * Revert "add doctest to circleci" This reverts commit c45b34ea911a81f87989f6c3a832b1e8d8c471c6. * Revert "Revert "add doctest to circleci"" This reverts commit 41fca97fdcfe1cf4f6bdb3bbba75d25fa3b11f70. * doctest docs rst files * Revert "doctest docs rst files" This reverts commit b4a2e83e3da5ed1909de500ec14b6b614527c07f. * doctest only rst * doctest debugging.rst * doctest apex * doctest callbacks * doctest early stopping * doctest for child modules * doctest experiment reporting * indentation * doctest fast training * doctest for hyperparams * doctests for lr_finder * doctests multi-gpu * more doctest * make doctest drone * fix label build error * update fast training * update invalid imports * fix problem with int device count * rebase stuff * wip * wip * wip * intro guide * add missing code block * circleci * logger import for doctest * test if doctest runs on drone * fix mnist download * also run install deps for building docs * install cmake * try sudo * hide output * try pip stuff * try to mock horovod * Tranfer -> Transfer * add torchvision to extras * revert pip stuff * mlflow file location * do not mock torch * torchvision * drone extra req. * try higher sphinx version * Revert "try higher sphinx version" This reverts commit 490ac28e46d6fd52352640dfdf0d765befa56988. * try coverage command * try coverage command * try undoc flag * newline * undo drone * report coverage * review Co-authored-by: Jirka Borovec <Borda@users.noreply.github.com> * remove torchvision from extras * skip tests only if torchvision not available * fix testoutput torchvision Co-authored-by: Jirka Borovec <Borda@users.noreply.github.com>
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.. testcode::
class Encoder(torch.nn.Module):
doctest for .rst files (#1511) * add doctest to circleci * Revert "add doctest to circleci" This reverts commit c45b34ea911a81f87989f6c3a832b1e8d8c471c6. * Revert "Revert "add doctest to circleci"" This reverts commit 41fca97fdcfe1cf4f6bdb3bbba75d25fa3b11f70. * doctest docs rst files * Revert "doctest docs rst files" This reverts commit b4a2e83e3da5ed1909de500ec14b6b614527c07f. * doctest only rst * doctest debugging.rst * doctest apex * doctest callbacks * doctest early stopping * doctest for child modules * doctest experiment reporting * indentation * doctest fast training * doctest for hyperparams * doctests for lr_finder * doctests multi-gpu * more doctest * make doctest drone * fix label build error * update fast training * update invalid imports * fix problem with int device count * rebase stuff * wip * wip * wip * intro guide * add missing code block * circleci * logger import for doctest * test if doctest runs on drone * fix mnist download * also run install deps for building docs * install cmake * try sudo * hide output * try pip stuff * try to mock horovod * Tranfer -> Transfer * add torchvision to extras * revert pip stuff * mlflow file location * do not mock torch * torchvision * drone extra req. * try higher sphinx version * Revert "try higher sphinx version" This reverts commit 490ac28e46d6fd52352640dfdf0d765befa56988. * try coverage command * try coverage command * try undoc flag * newline * undo drone * report coverage * review Co-authored-by: Jirka Borovec <Borda@users.noreply.github.com> * remove torchvision from extras * skip tests only if torchvision not available * fix testoutput torchvision Co-authored-by: Jirka Borovec <Borda@users.noreply.github.com>
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pass
class Decoder(torch.nn.Module):
pass
class AutoEncoder(LitMNIST):
doctest for .rst files (#1511) * add doctest to circleci * Revert "add doctest to circleci" This reverts commit c45b34ea911a81f87989f6c3a832b1e8d8c471c6. * Revert "Revert "add doctest to circleci"" This reverts commit 41fca97fdcfe1cf4f6bdb3bbba75d25fa3b11f70. * doctest docs rst files * Revert "doctest docs rst files" This reverts commit b4a2e83e3da5ed1909de500ec14b6b614527c07f. * doctest only rst * doctest debugging.rst * doctest apex * doctest callbacks * doctest early stopping * doctest for child modules * doctest experiment reporting * indentation * doctest fast training * doctest for hyperparams * doctests for lr_finder * doctests multi-gpu * more doctest * make doctest drone * fix label build error * update fast training * update invalid imports * fix problem with int device count * rebase stuff * wip * wip * wip * intro guide * add missing code block * circleci * logger import for doctest * test if doctest runs on drone * fix mnist download * also run install deps for building docs * install cmake * try sudo * hide output * try pip stuff * try to mock horovod * Tranfer -> Transfer * add torchvision to extras * revert pip stuff * mlflow file location * do not mock torch * torchvision * drone extra req. * try higher sphinx version * Revert "try higher sphinx version" This reverts commit 490ac28e46d6fd52352640dfdf0d765befa56988. * try coverage command * try coverage command * try undoc flag * newline * undo drone * report coverage * review Co-authored-by: Jirka Borovec <Borda@users.noreply.github.com> * remove torchvision from extras * skip tests only if torchvision not available * fix testoutput torchvision Co-authored-by: Jirka Borovec <Borda@users.noreply.github.com>
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def __init__(self):
doctest for .rst files (#1511) * add doctest to circleci * Revert "add doctest to circleci" This reverts commit c45b34ea911a81f87989f6c3a832b1e8d8c471c6. * Revert "Revert "add doctest to circleci"" This reverts commit 41fca97fdcfe1cf4f6bdb3bbba75d25fa3b11f70. * doctest docs rst files * Revert "doctest docs rst files" This reverts commit b4a2e83e3da5ed1909de500ec14b6b614527c07f. * doctest only rst * doctest debugging.rst * doctest apex * doctest callbacks * doctest early stopping * doctest for child modules * doctest experiment reporting * indentation * doctest fast training * doctest for hyperparams * doctests for lr_finder * doctests multi-gpu * more doctest * make doctest drone * fix label build error * update fast training * update invalid imports * fix problem with int device count * rebase stuff * wip * wip * wip * intro guide * add missing code block * circleci * logger import for doctest * test if doctest runs on drone * fix mnist download * also run install deps for building docs * install cmake * try sudo * hide output * try pip stuff * try to mock horovod * Tranfer -> Transfer * add torchvision to extras * revert pip stuff * mlflow file location * do not mock torch * torchvision * drone extra req. * try higher sphinx version * Revert "try higher sphinx version" This reverts commit 490ac28e46d6fd52352640dfdf0d765befa56988. * try coverage command * try coverage command * try undoc flag * newline * undo drone * report coverage * review Co-authored-by: Jirka Borovec <Borda@users.noreply.github.com> * remove torchvision from extras * skip tests only if torchvision not available * fix testoutput torchvision Co-authored-by: Jirka Borovec <Borda@users.noreply.github.com>
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super().__init__()
self.encoder = Encoder()
self.decoder = Decoder()
def forward(self, x):
generated = self.decoder(x)
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return generated
def training_step(self, batch, batch_idx):
x, _ = batch
representation = self.encoder(x)
x_hat = self(representation)
loss = MSE(x, x_hat)
return loss
def validation_step(self, batch, batch_idx):
doctest for .rst files (#1511) * add doctest to circleci * Revert "add doctest to circleci" This reverts commit c45b34ea911a81f87989f6c3a832b1e8d8c471c6. * Revert "Revert "add doctest to circleci"" This reverts commit 41fca97fdcfe1cf4f6bdb3bbba75d25fa3b11f70. * doctest docs rst files * Revert "doctest docs rst files" This reverts commit b4a2e83e3da5ed1909de500ec14b6b614527c07f. * doctest only rst * doctest debugging.rst * doctest apex * doctest callbacks * doctest early stopping * doctest for child modules * doctest experiment reporting * indentation * doctest fast training * doctest for hyperparams * doctests for lr_finder * doctests multi-gpu * more doctest * make doctest drone * fix label build error * update fast training * update invalid imports * fix problem with int device count * rebase stuff * wip * wip * wip * intro guide * add missing code block * circleci * logger import for doctest * test if doctest runs on drone * fix mnist download * also run install deps for building docs * install cmake * try sudo * hide output * try pip stuff * try to mock horovod * Tranfer -> Transfer * add torchvision to extras * revert pip stuff * mlflow file location * do not mock torch * torchvision * drone extra req. * try higher sphinx version * Revert "try higher sphinx version" This reverts commit 490ac28e46d6fd52352640dfdf0d765befa56988. * try coverage command * try coverage command * try undoc flag * newline * undo drone * report coverage * review Co-authored-by: Jirka Borovec <Borda@users.noreply.github.com> * remove torchvision from extras * skip tests only if torchvision not available * fix testoutput torchvision Co-authored-by: Jirka Borovec <Borda@users.noreply.github.com>
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return self._shared_eval(batch, batch_idx, 'val')
def test_step(self, batch, batch_idx):
doctest for .rst files (#1511) * add doctest to circleci * Revert "add doctest to circleci" This reverts commit c45b34ea911a81f87989f6c3a832b1e8d8c471c6. * Revert "Revert "add doctest to circleci"" This reverts commit 41fca97fdcfe1cf4f6bdb3bbba75d25fa3b11f70. * doctest docs rst files * Revert "doctest docs rst files" This reverts commit b4a2e83e3da5ed1909de500ec14b6b614527c07f. * doctest only rst * doctest debugging.rst * doctest apex * doctest callbacks * doctest early stopping * doctest for child modules * doctest experiment reporting * indentation * doctest fast training * doctest for hyperparams * doctests for lr_finder * doctests multi-gpu * more doctest * make doctest drone * fix label build error * update fast training * update invalid imports * fix problem with int device count * rebase stuff * wip * wip * wip * intro guide * add missing code block * circleci * logger import for doctest * test if doctest runs on drone * fix mnist download * also run install deps for building docs * install cmake * try sudo * hide output * try pip stuff * try to mock horovod * Tranfer -> Transfer * add torchvision to extras * revert pip stuff * mlflow file location * do not mock torch * torchvision * drone extra req. * try higher sphinx version * Revert "try higher sphinx version" This reverts commit 490ac28e46d6fd52352640dfdf0d765befa56988. * try coverage command * try coverage command * try undoc flag * newline * undo drone * report coverage * review Co-authored-by: Jirka Borovec <Borda@users.noreply.github.com> * remove torchvision from extras * skip tests only if torchvision not available * fix testoutput torchvision Co-authored-by: Jirka Borovec <Borda@users.noreply.github.com>
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return self._shared_eval(batch, batch_idx, 'test')
def _shared_eval(self, batch, batch_idx, prefix):
x, y = batch
representation = self.encoder(x)
x_hat = self(representation)
loss = F.nll_loss(logits, y)
result = pl.EvalResult()
result.log(f'{prefix}_loss', loss)
return result
doctest for .rst files (#1511) * add doctest to circleci * Revert "add doctest to circleci" This reverts commit c45b34ea911a81f87989f6c3a832b1e8d8c471c6. * Revert "Revert "add doctest to circleci"" This reverts commit 41fca97fdcfe1cf4f6bdb3bbba75d25fa3b11f70. * doctest docs rst files * Revert "doctest docs rst files" This reverts commit b4a2e83e3da5ed1909de500ec14b6b614527c07f. * doctest only rst * doctest debugging.rst * doctest apex * doctest callbacks * doctest early stopping * doctest for child modules * doctest experiment reporting * indentation * doctest fast training * doctest for hyperparams * doctests for lr_finder * doctests multi-gpu * more doctest * make doctest drone * fix label build error * update fast training * update invalid imports * fix problem with int device count * rebase stuff * wip * wip * wip * intro guide * add missing code block * circleci * logger import for doctest * test if doctest runs on drone * fix mnist download * also run install deps for building docs * install cmake * try sudo * hide output * try pip stuff * try to mock horovod * Tranfer -> Transfer * add torchvision to extras * revert pip stuff * mlflow file location * do not mock torch * torchvision * drone extra req. * try higher sphinx version * Revert "try higher sphinx version" This reverts commit 490ac28e46d6fd52352640dfdf0d765befa56988. * try coverage command * try coverage command * try undoc flag * newline * undo drone * report coverage * review Co-authored-by: Jirka Borovec <Borda@users.noreply.github.com> * remove torchvision from extras * skip tests only if torchvision not available * fix testoutput torchvision Co-authored-by: Jirka Borovec <Borda@users.noreply.github.com>
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and we can train this using the same trainer
.. code-block:: python
autoencoder = AutoEncoder()
trainer = Trainer()
trainer.fit(autoencoder)
And remember that the forward method is to define the practical use of a LightningModule.
In this case, we want to use the `AutoEncoder` to extract image representations
.. code-block:: python
some_images = torch.Tensor(32, 1, 28, 28)
representations = autoencoder(some_images)