2019-10-23 10:10:13 +00:00
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import os
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2019-12-04 11:48:53 +00:00
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2019-10-23 10:10:13 +00:00
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import pytest
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import torch
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2020-02-11 03:47:18 +00:00
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import tests.models.utils as tutils
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2019-10-23 10:10:13 +00:00
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from pytorch_lightning import Trainer
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from pytorch_lightning.callbacks import (
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ModelCheckpoint,
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)
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2020-02-11 03:47:18 +00:00
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from tests.models import (
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2019-10-23 10:10:13 +00:00
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LightningTestModel,
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LightningTestModelBase,
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LightningValidationStepMixin,
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LightningValidationMultipleDataloadersMixin,
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LightningTestMultipleDataloadersMixin,
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)
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2020-01-17 11:03:31 +00:00
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from pytorch_lightning.core.lightning import load_hparams_from_tags_csv
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2019-12-04 16:39:14 +00:00
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from pytorch_lightning.trainer.logging import TrainerLoggingMixin
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2019-10-23 10:10:13 +00:00
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2019-12-03 13:01:04 +00:00
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def test_no_val_module(tmpdir):
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"""Tests use case where trainer saves the model, and user loads it from tags independently."""
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tutils.reset_seed()
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2019-10-23 10:10:13 +00:00
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2019-11-28 17:06:05 +00:00
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hparams = tutils.get_hparams()
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2019-10-23 10:10:13 +00:00
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class CurrentTestModel(LightningTestModelBase):
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pass
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model = CurrentTestModel(hparams)
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# logger file to get meta
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logger = tutils.get_test_tube_logger(tmpdir, False)
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trainer_options = dict(
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max_epochs=1,
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logger=logger,
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checkpoint_callback=ModelCheckpoint(tmpdir)
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)
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# fit model
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trainer = Trainer(**trainer_options)
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result = trainer.fit(model)
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# training complete
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assert result == 1, 'amp + ddp model failed to complete'
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# save model
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new_weights_path = os.path.join(tmpdir, 'save_test.ckpt')
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trainer.save_checkpoint(new_weights_path)
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# load new model
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tags_path = tutils.get_data_path(logger, path_dir=tmpdir)
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tags_path = os.path.join(tags_path, 'meta_tags.csv')
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model_2 = LightningTestModel.load_from_metrics(weights_path=new_weights_path,
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tags_csv=tags_path)
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model_2.eval()
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2019-12-03 13:01:04 +00:00
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def test_no_val_end_module(tmpdir):
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"""Tests use case where trainer saves the model, and user loads it from tags independently."""
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tutils.reset_seed()
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2019-10-23 10:10:13 +00:00
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class CurrentTestModel(LightningValidationStepMixin, LightningTestModelBase):
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pass
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2019-11-28 17:06:05 +00:00
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hparams = tutils.get_hparams()
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model = CurrentTestModel(hparams)
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# logger file to get meta
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logger = tutils.get_test_tube_logger(tmpdir, False)
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trainer_options = dict(
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max_epochs=1,
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logger=logger,
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checkpoint_callback=ModelCheckpoint(tmpdir)
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)
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# fit model
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trainer = Trainer(**trainer_options)
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result = trainer.fit(model)
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# traning complete
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assert result == 1, 'amp + ddp model failed to complete'
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# save model
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new_weights_path = os.path.join(tmpdir, 'save_test.ckpt')
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trainer.save_checkpoint(new_weights_path)
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# load new model
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tags_path = tutils.get_data_path(logger, path_dir=tmpdir)
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tags_path = os.path.join(tags_path, 'meta_tags.csv')
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model_2 = LightningTestModel.load_from_metrics(weights_path=new_weights_path,
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tags_csv=tags_path)
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model_2.eval()
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2019-12-03 13:01:04 +00:00
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def test_gradient_accumulation_scheduling(tmpdir):
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"""
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Test grad accumulation by the freq of optimizer updates
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"""
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2020-02-01 23:44:05 +00:00
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tutils.reset_seed()
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2019-10-23 10:10:13 +00:00
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# test incorrect configs
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with pytest.raises(IndexError):
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assert Trainer(accumulate_grad_batches={0: 3, 1: 4, 4: 6})
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assert Trainer(accumulate_grad_batches={-2: 3})
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with pytest.raises(TypeError):
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assert Trainer(accumulate_grad_batches={})
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assert Trainer(accumulate_grad_batches=[[2, 3], [4, 6]])
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assert Trainer(accumulate_grad_batches={1: 2, 3.: 4})
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assert Trainer(accumulate_grad_batches={1: 2.5, 3: 5})
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# test optimizer call freq matches scheduler
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def optimizer_step(self, epoch, batch_idx, optimizer, optimizer_idx, second_order_closure=None):
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# only test the first 12 batches in epoch
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if batch_idx < 12:
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if epoch == 0:
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# reset counter when starting epoch
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if batch_idx == 0:
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self.prev_called_batch_idx = 0
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# use this opportunity to test once
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assert self.trainer.accumulate_grad_batches == 1
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2019-12-04 11:57:10 +00:00
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assert batch_idx == self.prev_called_batch_idx
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self.prev_called_batch_idx += 1
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2019-12-07 13:50:21 +00:00
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elif 1 <= epoch <= 2:
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# reset counter when starting epoch
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if batch_idx == 1:
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self.prev_called_batch_idx = 1
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# use this opportunity to test once
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assert self.trainer.accumulate_grad_batches == 2
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2019-12-04 11:57:10 +00:00
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assert batch_idx == self.prev_called_batch_idx
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self.prev_called_batch_idx += 2
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else:
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if batch_idx == 3:
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self.prev_called_batch_idx = 3
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# use this opportunity to test once
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assert self.trainer.accumulate_grad_batches == 4
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2019-12-04 11:57:10 +00:00
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assert batch_idx == self.prev_called_batch_idx
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self.prev_called_batch_idx += 3
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optimizer.step()
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# clear gradients
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optimizer.zero_grad()
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2019-11-28 17:06:05 +00:00
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hparams = tutils.get_hparams()
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model = LightningTestModel(hparams)
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schedule = {1: 2, 3: 4}
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trainer = Trainer(accumulate_grad_batches=schedule,
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train_percent_check=0.1,
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val_percent_check=0.1,
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max_epochs=4,
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default_save_path=tmpdir)
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# for the test
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trainer.optimizer_step = optimizer_step
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model.prev_called_batch_idx = 0
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trainer.fit(model)
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2019-12-03 13:01:04 +00:00
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def test_loading_meta_tags(tmpdir):
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tutils.reset_seed()
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from argparse import Namespace
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hparams = tutils.get_hparams()
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# save tags
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logger = tutils.get_test_tube_logger(tmpdir, False)
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logger.log_hyperparams(Namespace(some_str='a_str', an_int=1, a_float=2.0))
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logger.log_hyperparams(hparams)
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logger.save()
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# load tags
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2020-01-16 12:22:29 +00:00
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path_expt_dir = tutils.get_data_path(logger, path_dir=tmpdir)
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tags_path = os.path.join(path_expt_dir, 'meta_tags.csv')
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tags = load_hparams_from_tags_csv(tags_path)
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assert tags.batch_size == 32 and tags.hidden_dim == 1000
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def test_dp_output_reduce():
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mixin = TrainerLoggingMixin()
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tutils.reset_seed()
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# test identity when we have a single gpu
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out = torch.rand(3, 1)
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assert mixin.reduce_distributed_output(out, num_gpus=1) is out
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# average when we have multiples
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assert mixin.reduce_distributed_output(out, num_gpus=2) == out.mean()
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# when we have a dict of vals
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out = {
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'a': out,
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'b': {
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'c': out
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}
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}
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reduced = mixin.reduce_distributed_output(out, num_gpus=3)
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assert reduced['a'] == out['a']
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assert reduced['b']['c'] == out['b']['c']
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2019-12-03 13:01:04 +00:00
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def test_model_checkpoint_options(tmp_path):
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"""Test ModelCheckpoint options."""
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def mock_save_function(filepath):
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open(filepath, 'a').close()
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2019-11-28 17:06:05 +00:00
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hparams = tutils.get_hparams()
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_ = LightningTestModel(hparams)
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2019-11-19 23:43:35 +00:00
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# simulated losses
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save_dir = tmp_path / "1"
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save_dir.mkdir()
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losses = [10, 9, 2.8, 5, 2.5]
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# -----------------
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# CASE K=-1 (all)
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checkpoint_callback = ModelCheckpoint(save_dir, save_top_k=-1, verbose=1)
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checkpoint_callback.save_function = mock_save_function
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trainer = Trainer()
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checkpoint_callback.set_trainer(trainer)
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# emulate callback's calls during the training
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for i, loss in enumerate(losses):
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checkpoint_callback._trainer.current_epoch = i
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checkpoint_callback._trainer.callback_metrics = {'val_loss': loss}
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checkpoint_callback.on_validation_end()
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2019-11-19 23:43:35 +00:00
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file_lists = set(os.listdir(save_dir))
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assert len(file_lists) == len(losses), "Should save all models when save_top_k=-1"
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# verify correct naming
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for i in range(0, len(losses)):
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assert f'_ckpt_epoch_{i}.ckpt' in file_lists
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2019-12-03 13:01:04 +00:00
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save_dir = tmp_path / "2"
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save_dir.mkdir()
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2019-11-19 23:43:35 +00:00
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# -----------------
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# CASE K=0 (none)
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checkpoint_callback = ModelCheckpoint(save_dir, save_top_k=0, verbose=1)
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checkpoint_callback.save_function = mock_save_function
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trainer = Trainer()
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checkpoint_callback.set_trainer(trainer)
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# emulate callback's calls during the training
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for i, loss in enumerate(losses):
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checkpoint_callback._trainer.current_epoch = i
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checkpoint_callback._trainer.callback_metrics = {'val_loss': loss}
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checkpoint_callback.on_validation_end()
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file_lists = os.listdir(save_dir)
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assert len(file_lists) == 0, "Should save 0 models when save_top_k=0"
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2019-12-03 13:01:04 +00:00
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save_dir = tmp_path / "3"
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save_dir.mkdir()
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2019-11-19 23:43:35 +00:00
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# -----------------
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# CASE K=1 (2.5, epoch 4)
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checkpoint_callback = ModelCheckpoint(save_dir, save_top_k=1, verbose=1, prefix='test_prefix')
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checkpoint_callback.save_function = mock_save_function
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trainer = Trainer()
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checkpoint_callback.set_trainer(trainer)
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# emulate callback's calls during the training
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for i, loss in enumerate(losses):
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checkpoint_callback._trainer.current_epoch = i
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checkpoint_callback._trainer.callback_metrics = {'val_loss': loss}
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checkpoint_callback.on_validation_end()
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2019-11-19 23:43:35 +00:00
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file_lists = set(os.listdir(save_dir))
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assert len(file_lists) == 1, "Should save 1 model when save_top_k=1"
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assert 'test_prefix_ckpt_epoch_4.ckpt' in file_lists
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2019-12-03 13:01:04 +00:00
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save_dir = tmp_path / "4"
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save_dir.mkdir()
|
2019-11-19 23:43:35 +00:00
|
|
|
|
|
|
|
# -----------------
|
|
|
|
# CASE K=2 (2.5 epoch 4, 2.8 epoch 2)
|
|
|
|
# make sure other files don't get deleted
|
|
|
|
|
2020-02-16 05:03:05 +00:00
|
|
|
checkpoint_callback = ModelCheckpoint(save_dir, save_top_k=2, verbose=1)
|
2019-11-19 23:43:35 +00:00
|
|
|
open(f'{save_dir}/other_file.ckpt', 'a').close()
|
2020-02-16 05:03:05 +00:00
|
|
|
checkpoint_callback.save_function = mock_save_function
|
|
|
|
trainer = Trainer()
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|
|
|
checkpoint_callback.set_trainer(trainer)
|
|
|
|
|
|
|
|
# emulate callback's calls during the training
|
2019-11-19 23:43:35 +00:00
|
|
|
for i, loss in enumerate(losses):
|
2020-02-16 05:03:05 +00:00
|
|
|
checkpoint_callback._trainer.current_epoch = i
|
|
|
|
checkpoint_callback._trainer.callback_metrics = {'val_loss': loss}
|
|
|
|
checkpoint_callback.on_validation_end()
|
2019-11-19 23:43:35 +00:00
|
|
|
|
|
|
|
file_lists = set(os.listdir(save_dir))
|
|
|
|
|
|
|
|
assert len(file_lists) == 3, 'Should save 2 model when save_top_k=2'
|
|
|
|
assert '_ckpt_epoch_4.ckpt' in file_lists
|
|
|
|
assert '_ckpt_epoch_2.ckpt' in file_lists
|
|
|
|
assert 'other_file.ckpt' in file_lists
|
|
|
|
|
2019-12-03 13:01:04 +00:00
|
|
|
save_dir = tmp_path / "5"
|
|
|
|
save_dir.mkdir()
|
2019-11-19 23:43:35 +00:00
|
|
|
|
|
|
|
# -----------------
|
|
|
|
# CASE K=4 (save all 4 models)
|
|
|
|
# multiple checkpoints within same epoch
|
|
|
|
|
2020-02-16 05:03:05 +00:00
|
|
|
checkpoint_callback = ModelCheckpoint(save_dir, save_top_k=4, verbose=1)
|
|
|
|
checkpoint_callback.save_function = mock_save_function
|
|
|
|
trainer = Trainer()
|
|
|
|
checkpoint_callback.set_trainer(trainer)
|
|
|
|
|
|
|
|
# emulate callback's calls during the training
|
2019-11-19 23:43:35 +00:00
|
|
|
for loss in losses:
|
2020-02-16 05:03:05 +00:00
|
|
|
checkpoint_callback._trainer.current_epoch = 0
|
|
|
|
checkpoint_callback._trainer.callback_metrics = {'val_loss': loss}
|
|
|
|
checkpoint_callback.on_validation_end()
|
2019-11-19 23:43:35 +00:00
|
|
|
|
|
|
|
file_lists = set(os.listdir(save_dir))
|
|
|
|
|
|
|
|
assert len(file_lists) == 4, 'Should save all 4 models when save_top_k=4 within same epoch'
|
|
|
|
|
2019-12-03 13:01:04 +00:00
|
|
|
save_dir = tmp_path / "6"
|
|
|
|
save_dir.mkdir()
|
2019-11-19 23:43:35 +00:00
|
|
|
|
|
|
|
# -----------------
|
|
|
|
# CASE K=3 (save the 2nd, 3rd, 4th model)
|
|
|
|
# multiple checkpoints within same epoch
|
|
|
|
|
2020-02-16 05:03:05 +00:00
|
|
|
checkpoint_callback = ModelCheckpoint(save_dir, save_top_k=3, verbose=1)
|
|
|
|
checkpoint_callback.save_function = mock_save_function
|
|
|
|
trainer = Trainer()
|
|
|
|
checkpoint_callback.set_trainer(trainer)
|
|
|
|
|
|
|
|
# emulate callback's calls during the training
|
2019-11-19 23:43:35 +00:00
|
|
|
for loss in losses:
|
2020-02-16 05:03:05 +00:00
|
|
|
checkpoint_callback._trainer.current_epoch = 0
|
|
|
|
checkpoint_callback._trainer.callback_metrics = {'val_loss': loss}
|
|
|
|
checkpoint_callback.on_validation_end()
|
2019-11-19 23:43:35 +00:00
|
|
|
|
|
|
|
file_lists = set(os.listdir(save_dir))
|
|
|
|
|
|
|
|
assert len(file_lists) == 3, 'Should save 3 models when save_top_k=3'
|
|
|
|
assert '_ckpt_epoch_0_v2.ckpt' in file_lists
|
|
|
|
assert '_ckpt_epoch_0_v1.ckpt' in file_lists
|
|
|
|
assert '_ckpt_epoch_0.ckpt' in file_lists
|
|
|
|
|
|
|
|
|
2019-10-23 10:10:13 +00:00
|
|
|
def test_model_freeze_unfreeze():
|
2019-11-28 17:06:05 +00:00
|
|
|
tutils.reset_seed()
|
2019-10-23 10:10:13 +00:00
|
|
|
|
2019-11-28 17:06:05 +00:00
|
|
|
hparams = tutils.get_hparams()
|
2019-10-23 10:10:13 +00:00
|
|
|
model = LightningTestModel(hparams)
|
|
|
|
|
|
|
|
model.freeze()
|
|
|
|
model.unfreeze()
|
|
|
|
|
|
|
|
|
2019-12-03 13:01:04 +00:00
|
|
|
def test_multiple_val_dataloader(tmpdir):
|
2019-12-04 11:48:53 +00:00
|
|
|
"""Verify multiple val_dataloader."""
|
2019-11-28 17:06:05 +00:00
|
|
|
tutils.reset_seed()
|
2019-10-23 10:10:13 +00:00
|
|
|
|
|
|
|
class CurrentTestModel(
|
|
|
|
LightningValidationMultipleDataloadersMixin,
|
|
|
|
LightningTestModelBase
|
|
|
|
):
|
|
|
|
pass
|
|
|
|
|
2019-11-28 17:06:05 +00:00
|
|
|
hparams = tutils.get_hparams()
|
2019-10-23 10:10:13 +00:00
|
|
|
model = CurrentTestModel(hparams)
|
|
|
|
|
|
|
|
# logger file to get meta
|
|
|
|
trainer_options = dict(
|
2019-12-03 13:01:04 +00:00
|
|
|
default_save_path=tmpdir,
|
2019-12-07 13:50:21 +00:00
|
|
|
max_epochs=1,
|
2019-10-23 10:10:13 +00:00
|
|
|
val_percent_check=0.1,
|
|
|
|
train_percent_check=1.0,
|
|
|
|
)
|
|
|
|
|
|
|
|
# fit model
|
|
|
|
trainer = Trainer(**trainer_options)
|
|
|
|
result = trainer.fit(model)
|
|
|
|
|
|
|
|
# verify training completed
|
|
|
|
assert result == 1
|
|
|
|
|
|
|
|
# verify there are 2 val loaders
|
|
|
|
assert len(trainer.get_val_dataloaders()) == 2, \
|
|
|
|
'Multiple val_dataloaders not initiated properly'
|
|
|
|
|
|
|
|
# make sure predictions are good for each val set
|
|
|
|
for dataloader in trainer.get_val_dataloaders():
|
2019-11-28 17:06:05 +00:00
|
|
|
tutils.run_prediction(dataloader, trainer.model)
|
2019-10-23 10:10:13 +00:00
|
|
|
|
|
|
|
|
2019-12-03 13:01:04 +00:00
|
|
|
def test_multiple_test_dataloader(tmpdir):
|
2019-12-04 11:48:53 +00:00
|
|
|
"""Verify multiple test_dataloader."""
|
2019-11-28 17:06:05 +00:00
|
|
|
tutils.reset_seed()
|
2019-10-23 10:10:13 +00:00
|
|
|
|
|
|
|
class CurrentTestModel(
|
|
|
|
LightningTestMultipleDataloadersMixin,
|
|
|
|
LightningTestModelBase
|
|
|
|
):
|
|
|
|
pass
|
|
|
|
|
2019-11-28 17:06:05 +00:00
|
|
|
hparams = tutils.get_hparams()
|
2019-10-23 10:10:13 +00:00
|
|
|
model = CurrentTestModel(hparams)
|
|
|
|
|
|
|
|
# logger file to get meta
|
|
|
|
trainer_options = dict(
|
2019-12-03 13:01:04 +00:00
|
|
|
default_save_path=tmpdir,
|
2019-12-07 13:50:21 +00:00
|
|
|
max_epochs=1,
|
2019-10-23 10:10:13 +00:00
|
|
|
val_percent_check=0.1,
|
2020-01-23 16:12:51 +00:00
|
|
|
train_percent_check=0.2
|
2019-10-23 10:10:13 +00:00
|
|
|
)
|
|
|
|
|
|
|
|
# fit model
|
|
|
|
trainer = Trainer(**trainer_options)
|
|
|
|
result = trainer.fit(model)
|
|
|
|
|
|
|
|
# verify there are 2 val loaders
|
|
|
|
assert len(trainer.get_test_dataloaders()) == 2, \
|
|
|
|
'Multiple test_dataloaders not initiated properly'
|
|
|
|
|
|
|
|
# make sure predictions are good for each test set
|
|
|
|
for dataloader in trainer.get_test_dataloaders():
|
2019-11-28 17:06:05 +00:00
|
|
|
tutils.run_prediction(dataloader, trainer.model)
|
2019-10-23 10:10:13 +00:00
|
|
|
|
|
|
|
# run the test method
|
|
|
|
trainer.test()
|
|
|
|
|
|
|
|
|
2019-12-04 11:48:53 +00:00
|
|
|
# if __name__ == '__main__':
|
|
|
|
# pytest.main([__file__])
|