boinc/py/Boinc/db_base.py

550 lines
20 KiB
Python

## $Id$
# quarl 2003-10-16 initial version based on conglomeration of
# coursesurvey/database.py and boinc/database.py
# quarl 2003-10-16 implemented lazy lookups
# DB_BASE - an awesome view of an SQL database in Python. All relational
# objects are lazily cached. I.e. if table WORKUNIT has field RESULTID, wu =
# database.Workunits.find1(name='Wu1') will look up Wu1; accessing wu.result
# will do a database.Results.find1(id=wu.resultid) the first time
from __future__ import generators
import MySQLdb, MySQLdb.cursors
import sys, os, weakref
ID = '$Id$'
dbconnection = None
def list2dict(list):
dict = {}
for k in list: dict[k] = None
return dict
class DatabaseInconsistency(Exception):
def __init__(self, descript=None, search_table=None, search_kwargs=None):
self.descript = descript
self.search_table = search_table
self.search_kwargs = search_kwargs
self.search_tree = []
def __str__(self):
return ("""** DATABASE INCONSISTENCY **
%s
search_table = %s
search_kwargs = %s
search_tree = [
%s
] """ %(
self.descript,
self.search_table,
self.search_kwargs,
'\n'.join(
map(lambda o:" %s#%s %s"%(o._table.table,o.__dict__.get('id'),o), self.search_tree))
))
class Debug:
def __init__(self):
self.html = False
def printline(self,s):
if self.html:
print "<!-- ## %s -->"%s
else:
print >>sys.stderr, "##", s
debug = Debug()
debug.mysql = not not os.environ.get('DEBUG_DB')
def _execute_sql(cursor, command):
'''Same as ``cursor.execute(command)``, but more verbose on error.'''
try:
cursor.execute(command)
except MySQLdb.MySQLError, e:
e.args += (command,)
raise e
def _commit_object(tablename, paramdict, id=None):
"""Takes a tablename, a parameter dict, and an optional id. Puts together
the appropriate SQL command to commit the object to the database.
Executes it. Returns the object's id."""
assert(dbconnection)
cursor = dbconnection.cursor()
equalcommands = []
for key in paramdict.keys():
value = paramdict[key]
if value == None:
continue
elif isinstance(value, int):
equalcommands.append('%s=%d' %(key,value))
else:
equalcommands.append("%s='%s'"%(key,dbconnection.escape_string(str(value))))
if id == None:
command = 'INSERT INTO %s SET %s' % \
(tablename, ', '.join(equalcommands))
if debug.mysql:
debug.printline("query: "+command)
_execute_sql(cursor, command)
# id = cursor.insert_id() #porters note: works w/MySQLdb only
id = cursor.lastrowid
else:
command = "UPDATE %s SET %s WHERE id=%d" % \
(tablename, ', '.join(equalcommands), id)
if debug.mysql:
debug.printline("query: "+command)
_execute_sql(cursor, command)
cursor.close()
dbconnection.commit()
return id
def _remove_object(command, id=None):
"""Takes a command string, dbconnection object, and optional id. If an
id is given, it assembles the SQL command and deletes the object
from the database. Does nothing if no id is given."""
assert(dbconnection)
if id == None:
pass
else:
cursor = dbconnection.cursor()
command = 'DELETE FROM ' + command + \
' WHERE id=%d' % id
if debug.mysql:
debug.printline("query: "+command)
_execute_sql(cursor, command)
cursor.close()
dbconnection.commit()
def _select_object(table, searchdict, extra_args="", extra_params=[], select_what=None):
assert(dbconnection)
parameters = extra_params[:]
join = None
if '_join' in searchdict:
join = searchdict['_join']
del searchdict['_join']
if '_extra_params' in searchdict:
parameters += searchdict['_extra_params']
del searchdict['_extra_params']
command = 'SELECT %s from %s'%((select_what or "%s.*"%table) ,table)
if join:
command += "," + join
for (key,value) in searchdict.items():
if value == None:
value = ''
escaped_value = dbconnection.escape_string(str(value))
if key == 'text':
parameters.append("instr(%s,'%s')"%(key,escaped_value))
else:
parameters.append("%s='%s'"%(key,escaped_value))
if parameters:
command += ' WHERE ' + ' AND '.join(parameters)
if extra_args:
command += ' ' + extra_args.strip()
cursor = dbconnection.cursor()
if debug.mysql:
debug.printline("query: "+command)
_execute_sql(cursor, command)
return cursor
def _select_object_fetchall(*args, **kwargs):
cursor = apply(_select_object, args, kwargs)
results = cursor.fetchall()
cursor.close()
return results
def _select_object_iterate(*args, **kwargs):
cursor = apply(_select_object, args, kwargs)
while True:
result = cursor.fetchone()
if not result: return
yield result
def _select_count_objects(*args, **kwargs):
kwargs['select_what'] = 'count(*)'
cursor = apply(_select_object, args, kwargs)
result = cursor.fetchone().values()[0]
cursor.close()
return result
class Options:
pass
options = Options()
# keep up to this many objects in cache. we use a very bone-headed
# cache-management algorithm: when we reach this many objects, drop the oldest
# half.
options.OBJECT_CACHE_SIZE = 1024
# don't lookup referenced Ids until they are asked for. I.e., if
# evaluatedclass.instructorteamid=123, then if instructorteam#123 hasn't been
# looked up yet, don't look up evaluatedclass.instructorteam until it is
# referenced. use DEBUG_DB=1 to check out this niftiness.
options.LAZY_LOOKUPS = True
class DatabaseTable:
def __init__(self, table, columns, extra_columns=[],
select_args = None, sort_results = False):
self.table = table
self.lcolumns = columns
self.columns = list2dict(columns)
self.extra_columns = list2dict(extra_columns)
# self.object_class = object_class
self.select_args = select_args
self.sort_results = sort_results
## self.objects is a mapping from id->object which weakly references
## all current objects from this table. this guarantees that if a
## find() returns a row for which we already created an object in
## memory, we return the same one.
self.objects = weakref.WeakValueDictionary()
## self.object_cache is a list of the N most recently retrieved
## objects. its values aren't really used; the list is used to ensure
## the strong reference count for self.objects[object] is nonzero to
## ensure is lifetime.
##
## This means if you look up database.Apps[1]: the first lookup does a
## MySQL SELECT; afterwards database.Apps[1] is free (only requires a
## lookup in database.Apps.objects). To prevent this object cache
## from growing without bound, database.Apps.object is a weak-valued
## dictionary. This means that if no one refers to the object, it is
## deleted from the dictionary. database.Apps.object_cache maintains
## a list of the OBJECT_CACHE_SIZE most recent lookups, which forces
## their strong reference count.
self.object_cache = []
self.defdict = {}
for key in self.lcolumns:
if key == 'id':
self.defdict[key] = None
elif key.endswith('id'):
self.defdict[key[:-2]] = None
elif key.endswith('ids'):
self.defdict[key[:-3]] = None
else:
self.defdict[key] = None
def _cache(self, object):
"""Maintain up to OBJECT_CACHE_SIZE objects in the object_cache list.
The object's existence in this cache ensures its strong reference
count is nonzero, so that it doesn't get implicitly dropped from
self.objects."""
if len(self.object_cache) >= options.OBJECT_CACHE_SIZE:
self.object_cache = self.object_cache[:-options.OBJECT_CACHE_SIZE/2]
self.object_cache.append(object)
def _is_cached(self, id):
'''Returns True if object is automatically-cached, i.e. in the weak
reference cache.
This is not the same as the manual cache invoked by _cache(), i.e. the
strong reference cache.
'''
return id in self.objects
def _modify_find_args(self, kwargs):
'''Derived classes can override this function to modify kwargs.
This is only called for non-trivial find args (if there are arguments
and not just "id")'''
pass
def clear_cache(self):
"""
Clears the cached objects list
"""
self.object_cache = []
def count(self, **kwargs):
"""Return the number of database objects matching keywords.
Arguments are the same format as find()."""
if not kwargs:
# shortcut since this is the most common case
return _select_count_objects(self.table, {})
if kwargs.keys() == ['id']:
# looking up by ID only, look in cache first:
id = kwargs['id']
if not id:
return 0
if id in self.objects:
return 1
self._modify_find_args(kwargs)
kwargs = self.dict2database_fields(kwargs)
return _select_count_objects(self.table, kwargs,
extra_args=self.select_args)
def find(self, **kwargs):
"""Return a list of database objects matching keywords.
Allowed keywords are specified by self.columns.
Objects are cached by ID so repeated lookups are quick.
"""
if kwargs.keys() == ['id']:
# looking up by ID only, look in cache first:
id = kwargs['id']
if not id:
return [None]
try:
return [self.objects[id]]
except KeyError:
pass
limbo_object = self.object_class(id=None) # prevent possible id recursion
limbo_object.in_limbo = 1
self.objects[id] = limbo_object
self._cache(limbo_object)
self._modify_find_args(kwargs)
kwargs = self.dict2database_fields(kwargs)
results = _select_object_fetchall(self.table, kwargs,
extra_args=self.select_args)
objects = self._create_objects_from_sql_results(results, kwargs)
# up to this point objects should be equivalent to list(iterate(...))
if self.sort_results:
objects.sort()
return objects
def iterate(self, **kwargs):
"""Same as find(), but using generators, and no sorting."""
if kwargs.keys() == ['id']:
# looking up by ID only, look in cache first:
id = kwargs['id']
if not id:
return
try:
yield self.objects[id]
return
except KeyError:
pass
limbo_object = self.object_class(id=None) # prevent possible id recursion
limbo_object.in_limbo = 1
self.objects[id] = limbo_object
self._cache(limbo_object)
self._modify_find_args(kwargs)
kwargs = self.dict2database_fields(kwargs)
for result in _select_object_iterate(self.table, kwargs,
extra_args=self.select_args):
yield self._create_object_from_sql_result(result)
return
def _create_objects_from_sql_results(self, results, kwargs):
return map(self._create_object_from_sql_result, results)
def _create_object_from_sql_result(self, result):
id = result['id']
try:
# object already exists in cache?
object = self.objects[id]
if 'in_limbo' in object.__dict__:
# earlier we set the object cache so that we don't recurse;
# update it now with real values and delete the 'in limbo'
# flag
del object.__dict__['in_limbo']
object.do_init(result)
except KeyError:
# create the object - looking up instructors, etc
object = apply(self.object_class, [], result)
if object.id:
self.objects[object.id] = object
self._cache(object)
return object
def find1(self, **kwargs):
'''Return a single result. Raises a DatabaseInconsistency if not
exactly 1 result returned.'''
objects = apply(self.find, [], kwargs)
if len(objects) != 1:
raise DatabaseInconsistency(
descript="find1: expected 1 result but found %d"%len(objects),
search_table = self.table,
search_kwargs = kwargs)
return objects[0]
def __getitem__(self, id):
'''Lookup (possibly cached) object by id. Returns None if id==None.'''
return id and self.find1(id=id)
def objdict2database_fields(self, indict, lazydict):
dict = {}
for key in self.columns:
if key.endswith('id'):
xkey = key[:-2]
if xkey in lazydict:
# lazydict maps 'name' (without 'id') -> (table,id)
dict[key] = lazydict[xkey][1]
else:
obj = indict[xkey]
dict[key] = obj and obj.id or 0
else:
dict[key] = indict[key]
return dict
def _valid_query_keys(self):
return self.columns.keys()+self.extra_columns.keys()+['_join','_extra_params']
def dict2database_fields(self, indict):
indict = indict.copy()
dict = {}
if 'id' in indict:
dict['id'] = indict['id']
del indict['id']
for key in self._valid_query_keys():
if key.endswith('id'):
xkey = key[:-2]
if xkey in indict:
obj = indict[xkey]
dict[key] = obj and obj.id
del indict[xkey]
else:
if key in indict:
dict[key] = indict[key]
del indict[key]
if len(indict):
raise ValueError('Invalid key(s): %s'%indict)
return dict
class DatabaseObject:
id_lookups = {} # set by init_table_classes
def _set_field(self, key, value):
"""Set field KEY to VALUE. May be overridden by derived class.
if options.LAZY_LOOKUPS is true, then possibly don't look up a value
yet.
"""
if key.endswith('id') and not key.endswith('_id'):
xkey = key[:-2]
table = self.id_lookups[xkey]._table
id = value
if options.LAZY_LOOKUPS:
if table._is_cached(id):
self.__dict__[xkey] = table.objects[id]
else:
del self.__dict__[xkey]
self._lazy_lookups[xkey] = (table, id)
else:
# always lookup values
self.__dict__[xkey] = table[id]
else:
self.__dict__[key] = value
def __getattr__(self, name):
if options.LAZY_LOOKUPS and name in self._lazy_lookups:
(table, id) = self._lazy_lookups[name]
del self._lazy_lookups[name]
object = table[id] # this probably invokes MySQL SELECTs
self.__dict__[name] = object
return object
raise AttributeError(name)
def database_fields_to_self(self, dict):
columns = self._table.columns
self.__dict__.update(self._table.defdict) # set defaults to None
# set this first so that if we get a DatabaseInconsistency we can see
# the id
self.id = dict.get('id')
for (key, value) in dict.items():
if key == 'id':
continue
if key or key+'id' in columns:
self._set_field(key, value)
else:
raise ValueError("database '%s' object doesn't take argument '%s'"%(
self._table.table, key))
def do_init(self, kwargs):
try:
self.database_fields_to_self(kwargs)
except DatabaseInconsistency, e:
e.search_tree.append(self)
raise
# if no id then object starts dirty
self._set_dirty(not self.id)
def __init__(self, **kwargs):
self._lazy_lookups = {}
self.do_init(kwargs)
def __eq__(self, other):
return other!=None and isinstance(other, DatabaseObject) and self.id == other.id
def __ne__(self, other):
return not (self == other)
def __hash__(self):
return self.id or 0
def _commit_params(self, paramdict):
"""Commits the object to the dbconnection database."""
self.id = _commit_object(self._table.table, paramdict, self.id)
def commit(self, force=False):
if force or self._dirty:
self._commit_params(self._table.objdict2database_fields(self.__dict__, self._lazy_lookups))
self._set_dirty(False)
def remove(self):
"""Removes the object from the dbconnection database."""
_remove_object(self._table.table, self.id)
self.id = None
def dset(self, key, value):
if self.__dict__[key] != value:
self.__dict__[key] = value
self._set_dirty()
def __setattr__(self, key, value):
if key in self._table.columns or key+'id' in self._table.columns:
self.dset(key, value)
else:
self.__dict__[key] = value
def _set_dirty(self, value=True):
self.__dict__['_dirty'] = value
def do_connect(db, user, passwd, host='localhost'):
"""Takes a database name, a username, and password. Connects to
SQL server and makes a new Dbconnection."""
global dbconnection
if dbconnection:
raise 'Already connected'
dbconnection = MySQLdb.connect(db=db,host=host,user=user,passwd=passwd,
cursorclass=MySQLdb.cursors.DictCursor)
def close():
"""Closes the connection to the sql survey and deletes the Dbconnection object."""
global dbconnection
dbconnection.close()
dbconnection = None
def get_dbconnection():
return dbconnection
def set_dbconnection(d):
dbconnection = d
def init_table_classes(database_classes_, more_id_lookups = {}):
"""initialize the list of database classes and tables. To be called from
database.py.
"""
global database_classes, database_tables
database_classes = database_classes_
for Class in database_classes:
Class._table.object_class = Class
DatabaseObject.id_lookups[Class._table.table] = Class
DatabaseObject.id_lookups.update(more_id_lookups)
database_tables = map(lambda c: c._table, database_classes)
def check_database_consistency():
'''Raises DatabaseInconsistency on error.
Loads the entire database into memory so will take a while.
'''
options.LAZY_LOOKUPS = False
for table in database_tables:
print '\rChecking %s: [counting]' %(table.table),
sys.stdout.flush()
count = table.count()
i = 0
j_limit = int(count / 100) # show progress every 1%
j = j_limit
print '\rChecking %s: [iterating]' %(table.table),
sys.stdout.flush()
for object in table.iterate():
# we don't need to do anything here; just iterating through the
# database will automatically read everything into memory
i += 1
if j == j_limit:
print '\rChecking %s: [%d/%d] %3.f%%' %(table.table, i, count, 100.0*i/count),
sys.stdout.flush()
j = 0
j += 1
print '\rChecking %s: all %d rows are good' %(table.table, count)