## $Id$ # quarl 2003-10-16 initial version based on conglomeration of # coursesurvey/database.py and boinc/database.py # quarl 2003-10-16 implemented lazy lookups # DB_BASE - an awesome view of an SQL database in Python. All relational # objects are lazily cached. I.e. if table WORKUNIT has field RESULTID, wu = # database.Workunits.find1(name='Wu1') will look up Wu1; accessing wu.result # will do a database.Results.find1(id=wu.resultid) the first time from __future__ import generators import MySQLdb, MySQLdb.cursors import sys, os, weakref ID = '$Id$' dbconnection = None def list2dict(list): dict = {} for k in list: dict[k] = None return dict class DatabaseInconsistency(Exception): def __init__(self, descript=None, search_table=None, search_kwargs=None): self.descript = descript self.search_table = search_table self.search_kwargs = search_kwargs self.search_tree = [] def __str__(self): return ("""** DATABASE INCONSISTENCY ** %s search_table = %s search_kwargs = %s search_tree = [ %s ] """ %( self.descript, self.search_table, self.search_kwargs, '\n'.join( map(lambda o:" %s#%s %s"%(o._table.table,o.__dict__.get('id'),o), self.search_tree)) )) class Debug: def __init__(self): self.html = False def printline(self,s): if self.html: print ""%s else: print >>sys.stderr, "##", s debug = Debug() debug.mysql = not not os.environ.get('DEBUG_DB') def _commit_object(tablename, paramdict, id=None): """Takes a tablename, a parameter dict, and an optional id. Puts together the appropriate SQL command to commit the object to the database. Executes it. Returns the object's id.""" assert(dbconnection) cursor = dbconnection.cursor() equalcommands = [] for key in paramdict.keys(): value = paramdict[key] if value == None: continue elif isinstance(value, int): equalcommands.append('%s=%d' %(key,value)) else: equalcommands.append("%s='%s'"%(key,dbconnection.escape_string(str(value)))) if id == None: command = 'INSERT INTO %s SET %s' % \ (tablename, ', '.join(equalcommands)) if debug.mysql: debug.printline("query: "+command) cursor.execute(command) id = cursor.insert_id() #porters note: works w/MySQLdb only else: command = "UPDATE %s SET %s WHERE id=%d" % \ (tablename, ', '.join(equalcommands), id) if debug.mysql: debug.printline("query: "+command) cursor.execute(command) cursor.close() dbconnection.commit() return id def _remove_object(command, id=None): """Takes a command string, dbconnection object, and optional id. If an id is given, it assembles the SQL command and deletes the object from the database. Does nothing if no id is given.""" assert(dbconnection) if id == None: pass else: cursor = dbconnection.cursor() command = 'DELETE FROM ' + command + \ ' WHERE id=%d' % id if debug.mysql: debug.printline("query: "+command) cursor.execute(command) cursor.close() dbconnection.commit() def _select_object(table, searchdict, extra_args="", extra_params=[], select_what=None): assert(dbconnection) parameters = extra_params[:] join = None if '_join' in searchdict: join = searchdict['_join'] del searchdict['_join'] if '_extra_params' in searchdict: parameters += searchdict['_extra_params'] del searchdict['_extra_params'] command = 'SELECT %s from %s'%((select_what or "%s.*"%table) ,table) if join: command += "," + join for (key,value) in searchdict.items(): # note: if value == 0, we want to look for it. if value != None and value != '': escaped_value = dbconnection.escape_string(str(value)) if key == 'text': parameters.append("instr(%s,'%s')"%(key,escaped_value)) else: parameters.append("%s='%s'"%(key,escaped_value)) if parameters: command += ' WHERE ' + ' AND '.join(parameters) if extra_args: command += ' ' + extra_args.strip() cursor = dbconnection.cursor() if debug.mysql: debug.printline("query: "+command) cursor.execute(command) return cursor def _select_object_fetchall(*args, **kwargs): cursor = apply(_select_object, args, kwargs) results = cursor.fetchall() cursor.close() return results def _select_object_iterate(*args, **kwargs): cursor = apply(_select_object, args, kwargs) while True: result = cursor.fetchone() if not result: return yield result def _select_count_objects(*args, **kwargs): kwargs['select_what'] = 'count(*)' cursor = apply(_select_object, args, kwargs) result = cursor.fetchone().values()[0] cursor.close() return result class Options: pass options = Options() # keep up to this many objects in cache. we use a very bone-headed # cache-management algorithm: when we reach this many objects, drop the oldest # half. options.OBJECT_CACHE_SIZE = 1024 # don't lookup referenced Ids until they are asked for. I.e., if # evaluatedclass.instructorteamid=123, then if instructorteam#123 hasn't been # looked up yet, don't look up evaluatedclass.instructorteam until it is # referenced. use DEBUG_DB=1 to check out this niftiness. options.LAZY_LOOKUPS = True class DatabaseTable: def __init__(self, table, columns, extra_columns=[], select_args = None, sort_results = False): self.table = table self.lcolumns = columns self.columns = list2dict(columns) self.extra_columns = list2dict(extra_columns) # self.object_class = object_class self.select_args = select_args self.sort_results = sort_results ## self.objects is a mapping from id->object which weakly references ## all current objects from this table. this guarantees that if a ## find() returns a row for which we already created an object in ## memory, we return the same one. self.objects = weakref.WeakValueDictionary() ## self.object_cache is a list of the N most recently retrieved ## objects. its values aren't really used; the list is used to ensure ## the strong reference count for self.objects[object] is nonzero to ## ensure is lifetime. ## ## This means if you look up database.Apps[1]: the first lookup does a ## MySQL SELECT; afterwards database.Apps[1] is free (only requires a ## lookup in database.Apps.objects). To prevent this object cache ## from growing without bound, database.Apps.object is a weak-valued ## dictionary. This means that if no one refers to the object, it is ## deleted from the dictionary. database.Apps.object_cache maintains ## a list of the OBJECT_CACHE_SIZE most recent lookups, which forces ## their strong reference count. self.object_cache = [] self.defdict = {} for key in self.lcolumns: if key == 'id': self.defdict[key] = None elif key.endswith('id'): self.defdict[key[:-2]] = None elif key.endswith('ids'): self.defdict[key[:-3]] = None else: self.defdict[key] = None def _cache(self, object): """Maintain up to OBJECT_CACHE_SIZE objects in the object_cache list. The object's existence in this cache ensures its strong reference count is nonzero, so that it doesn't get implicitly dropped from self.objects.""" if len(self.object_cache) >= options.OBJECT_CACHE_SIZE: self.object_cache = self.object_cache[:-options.OBJECT_CACHE_SIZE/2] self.object_cache.append(object) def _is_cached(self, id): '''Returns True if object is automatically-cached, i.e. in the weak reference cache. This is not the same as the manual cache invoked by _cache(), i.e. the strong reference cache. ''' return id in self.objects def _modify_find_args(self, kwargs): '''Derived classes can override this function to modify kwargs. This is only called for non-trivial find args (if there are arguments and not just "id")''' pass def count(self, **kwargs): """Return the number of database objects matching keywords. Arguments are the same format as find().""" if not kwargs: # shortcut since this is the most common case return _select_count_objects(self.table, {}) if kwargs.keys() == ['id']: # looking up by ID only, look in cache first: id = kwargs['id'] if not id: return 0 if id in self.objects: return 1 self._modify_find_args(kwargs) kwargs = self.dict2database_fields(kwargs) return _select_count_objects(self.table, kwargs, extra_args=self.select_args) def find(self, **kwargs): """Return a list of database objects matching keywords. Allowed keywords are specified by self.columns. Objects are cached by ID so repeated lookups are quick. """ if kwargs.keys() == ['id']: # looking up by ID only, look in cache first: id = kwargs['id'] if not id: return [None] try: return [self.objects[id]] except KeyError: pass limbo_object = self.object_class(id=None) # prevent possible id recursion limbo_object.in_limbo = 1 self.objects[id] = limbo_object self._cache(limbo_object) self._modify_find_args(kwargs) kwargs = self.dict2database_fields(kwargs) results = _select_object_fetchall(self.table, kwargs, extra_args=self.select_args) objects = self._create_objects_from_sql_results(results, kwargs) # up to this point objects should be equivalent to list(iterate(...)) if self.sort_results: objects.sort() return objects def iterate(self, **kwargs): """Same as find(), but using generators, and no sorting.""" if kwargs.keys() == ['id']: # looking up by ID only, look in cache first: id = kwargs['id'] if not id: return try: yield self.objects[id] return except KeyError: pass limbo_object = self.object_class(id=None) # prevent possible id recursion limbo_object.in_limbo = 1 self.objects[id] = limbo_object self._cache(limbo_object) self._modify_find_args(kwargs) kwargs = self.dict2database_fields(kwargs) for result in _select_object_iterate(self.table, kwargs, extra_args=self.select_args): yield self._create_object_from_sql_result(result) return def _create_objects_from_sql_results(self, results, kwargs): return map(self._create_object_from_sql_result, results) def _create_object_from_sql_result(self, result): id = result['id'] try: # object already exists in cache? object = self.objects[id] if 'in_limbo' in object.__dict__: # earlier we set the object cache so that we don't recurse; # update it now with real values and delete the 'in limbo' # flag del object.__dict__['in_limbo'] object.do_init(result) except KeyError: # create the object - looking up instructors, etc object = apply(self.object_class, [], result) if object.id: self.objects[object.id] = object self._cache(object) return object def find1(self, **kwargs): '''Return a single result. Raises a DatabaseInconsistency if not exactly 1 result returned.''' objects = apply(self.find, [], kwargs) if len(objects) != 1: raise DatabaseInconsistency( descript="find1: expected 1 result but found %d"%len(objects), search_table = self.table, search_kwargs = kwargs) return objects[0] def __getitem__(self, id): '''Lookup (possibly cached) object by id. Returns None if id==None.''' return id and self.find1(id=id) def objdict2database_fields(self, indict, lazydict): dict = {} for key in self.columns: if key.endswith('id'): xkey = key[:-2] if xkey in lazydict: # lazydict maps 'name' (without 'id') -> (table,id) dict[key] = lazydict[xkey][1] else: obj = indict[xkey] dict[key] = obj and obj.id or 0 else: dict[key] = indict[key] return dict def _valid_query_keys(self): return self.columns.keys()+self.extra_columns.keys()+['_join','_extra_params'] def dict2database_fields(self, indict): indict = indict.copy() dict = {} if 'id' in indict: dict['id'] = indict['id'] del indict['id'] for key in self._valid_query_keys(): if key.endswith('id'): xkey = key[:-2] if xkey in indict: obj = indict[xkey] dict[key] = obj and obj.id del indict[xkey] else: if key in indict: dict[key] = indict[key] del indict[key] if len(indict): raise ValueError('Invalid key(s): %s'%indict) return dict class DatabaseObject: id_lookups = {} # set by init_table_classes def _set_field(self, key, value): """Set field KEY to VALUE. May be overridden by derived class. if options.LAZY_LOOKUPS is true, then possibly don't look up a value yet. """ if key.endswith('id'): xkey = key[:-2] table = self.id_lookups[xkey]._table id = value if options.LAZY_LOOKUPS: if table._is_cached(id): self.__dict__[xkey] = table.objects[id] else: del self.__dict__[xkey] self._lazy_lookups[xkey] = (table, id) else: # always lookup values self.__dict__[xkey] = table[id] else: self.__dict__[key] = value def __getattr__(self, name): if options.LAZY_LOOKUPS and name in self._lazy_lookups: (table, id) = self._lazy_lookups[name] del self._lazy_lookups[name] object = table[id] # this probably invokes MySQL SELECTs self.__dict__[name] = object return object raise AttributeError(name) def database_fields_to_self(self, dict): columns = self._table.columns self.__dict__.update(self._table.defdict) # set defaults to None # set this first so that if we get a DatabaseInconsistency we can see # the id self.id = dict.get('id') for (key, value) in dict.items(): if key == 'id': continue if key or key+'id' in columns: self._set_field(key, value) else: raise ValueError("database '%s' object doesn't take argument '%s'"%( self._table.table, key)) def do_init(self, kwargs): try: self.database_fields_to_self(kwargs) except DatabaseInconsistency, e: e.search_tree.append(self) raise # if no id then object starts dirty self._set_dirty(not self.id) def __init__(self, **kwargs): self._lazy_lookups = {} self.do_init(kwargs) def __eq__(self, other): return other!=None and self.id == other.id def __ne__(self, other): return not (self == other) def __hash__(self): return self.id or 0 def _commit_params(self, paramdict): """Commits the object to the dbconnection database.""" self.id = _commit_object(self._table.table, paramdict, self.id) def commit(self, force=False): if force or self._dirty: self._commit_params(self._table.objdict2database_fields(self.__dict__, self._lazy_lookups)) self._set_dirty(False) def remove(self): """Removes the object from the dbconnection database.""" _remove_object(self._table.table, self.id) self.id = None def dset(self, key, value): if self.__dict__[key] != value: self.__dict__[key] = value self._set_dirty() def __setattr__(self, key, value): if key in self._table.columns or key+'id' in self._table.columns: self.dset(key, value) else: self.__dict__[key] = value def _set_dirty(self, value=True): self.__dict__['_dirty'] = value def do_connect(db, user, passwd, host='localhost'): """Takes a database name, a username, and password. Connects to SQL server and makes a new Dbconnection.""" global dbconnection if dbconnection: raise 'Already connected' dbconnection = MySQLdb.connect(db=db,host=host,user=user,passwd=passwd, cursorclass=MySQLdb.cursors.DictCursor) def close(): """Closes the connection to the sql survey and deletes the Dbconnection object.""" global dbconnection dbconnection.close() dbconnection = None def get_dbconnection(): return dbconnection def set_dbconnection(d): dbconnection = d def init_table_classes(database_classes_, more_id_lookups = {}): """initialize the list of database classes and tables. To be called from database.py. """ global database_classes, database_tables database_classes = database_classes_ for Class in database_classes: Class._table.object_class = Class DatabaseObject.id_lookups[Class._table.table] = Class DatabaseObject.id_lookups.update(more_id_lookups) database_tables = map(lambda c: c._table, database_classes) def check_database_consistency(): '''Raises DatabaseInconsistency on error. Loads the entire database into memory so will take a while. ''' options.LAZY_LOOKUPS = False for table in database_tables: print '\rChecking %s: [counting]' %(table.table), sys.stdout.flush() count = table.count() i = 0 j_limit = int(count / 100) # show progress every 1% j = j_limit print '\rChecking %s: [iterating]' %(table.table), sys.stdout.flush() for object in table.iterate(): # we don't need to do anything here; just iterating through the # database will automatically read everything into memory i += 1 if j == j_limit: print '\rChecking %s: [%d/%d] %3.f%%' %(table.table, i, count, 100.0*i/count), sys.stdout.flush() j = 0 j += 1 print '\rChecking %s: all %d rows are good' %(table.table, count)