24 Commits

Author	SHA1	Message	Date
Max Bachmann	361dc046ee	fix outstanding linter errors	2024-03-06 00:04:18 +01:00
Max Bachmann	ac9663614a	apply formatter	2024-03-05 23:53:48 +01:00
Max Bachmann	a4c4523c1b	only capture exception when they are expected	2023-12-28 18:18:16 +01:00
Max Bachmann	27f178bae6	add score_multiplier	2023-10-21 22:24:44 +02:00
Max Bachmann	ac83d6ade6	skip pd.NA similar to np.nan / None	2023-10-21 19:47:18 +02:00
Max Bachmann	e4bfaec4d6	implement pure Python editops for Indel/LCSseq	2023-08-16 16:36:22 +02:00
Max Bachmann	847361367e	improve consistency of exception messages between the C++ and pure Python implementation	2023-04-29 19:35:40 +02:00
Max Bachmann	c1251b55c7	do not enforce same message everywhere	2023-04-29 19:19:32 +02:00
Max Bachmann	65c0b8c256	add pad argument	2023-04-29 18:18:53 +02:00
Max Bachmann	158b7be805	fix division by zero	2023-04-16 23:42:55 +02:00
Max Bachmann	f193bfacba	add support for None / nan in process.cdist	2023-04-16 22:33:55 +02:00
Max Bachmann	f6953edc28	improve compatibility between Python and C++ implementation	2023-04-16 16:34:20 +02:00
Max Bachmann	a3de64f8a1	replace **kwargs with scorer_kwargs	2023-04-13 00:41:48 +02:00
Max Bachmann	ca0aa4d110	allow 120 characters per line	2023-04-12 12:24:53 +02:00
Max Bachmann	692538140a	fix some linter warnings	2023-04-12 12:14:59 +02:00
Max Bachmann	26fb8fe5a4	simplify typing	2023-04-12 11:33:00 +02:00
Max Bachmann	4776e8e91a	do not always import both sse2 and avx2 implementation	2023-04-12 01:32:42 +02:00
Max Bachmann	15ef70534a	fix tests after restructuring	2023-04-12 00:06:52 +02:00
Max Bachmann	d2af2a3821	simplify fuzz tests	2022-12-24 14:45:58 +01:00
Max Bachmann	3f83cba3ce	improve handling of None/nan	2022-12-04 23:30:11 +01:00
Max Bachmann	7ef0e5755a	improve test coverage	2022-11-04 00:21:20 +01:00
Max Bachmann	8fd63c2be1	fix tests	2022-11-02 23:27:26 +01:00
Max Bachmann	2039b5701a	fix some more bugs	2022-11-02 22:46:23 +01:00
Max Bachmann	4d6def2fde	increase test coverage	2022-11-02 21:28:45 +01:00